EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000011127 (Gene tree)
Gene ID: 102417071
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 39866 bases
Position: chrGL429821:1216302-1256167
Accession: 102417071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000010173	zf-CCCH	PF00642.24	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000011161	RC3H1-201	3378	XM_006088924	ENSMLUP00000010173	1125 (aa)	XP_023609718	G1PHL7

Gene Model

Click here to download ENSMLUG00000011127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000011127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000011127	RC3H1	92	53.548	ENSMLUG00000013992	RC3H2	87	53.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000011127	RC3H1	100	95.587	ENSG00000135870	RC3H1	100	95.587	Homo_sapiens
ENSMLUG00000011127	RC3H1	100	95.760	ENSAMEG00000015657	RC3H1	100	95.760	Ailuropoda_melanoleuca
ENSMLUG00000011127	RC3H1	100	86.812	ENSAPLG00000005341	RC3H1	100	86.276	Anas_platyrhynchos
ENSMLUG00000011127	RC3H1	100	84.017	ENSACAG00000015271	RC3H1	100	83.552	Anolis_carolinensis
ENSMLUG00000011127	RC3H1	100	95.587	ENSANAG00000036716	RC3H1	100	95.587	Aotus_nancymaae
ENSMLUG00000011127	RC3H1	100	93.998	ENSBTAG00000052708	RC3H1	100	93.998	Bos_taurus
ENSMLUG00000011127	RC3H1	100	95.146	ENSCJAG00000009106	RC3H1	100	95.234	Callithrix_jacchus
ENSMLUG00000011127	RC3H1	100	95.583	ENSCAFG00000014434	RC3H1	100	95.583	Canis_familiaris
ENSMLUG00000011127	RC3H1	100	95.499	ENSCAFG00020017112	RC3H1	99	97.528	Canis_lupus_dingo
ENSMLUG00000011127	RC3H1	100	94.346	ENSCHIG00000002873	RC3H1	100	94.346	Capra_hircus
ENSMLUG00000011127	RC3H1	99	94.258	ENSTSYG00000003913	RC3H1	99	94.258	Carlito_syrichta
ENSMLUG00000011127	RC3H1	100	90.291	ENSCPOG00000004349	RC3H1	100	90.026	Cavia_porcellus
ENSMLUG00000011127	RC3H1	100	93.204	ENSCCAG00000025652	RC3H1	100	93.292	Cebus_capucinus
ENSMLUG00000011127	RC3H1	100	95.675	ENSCATG00000033497	RC3H1	100	95.675	Cercocebus_atys
ENSMLUG00000011127	RC3H1	100	93.557	ENSCLAG00000011267	RC3H1	100	93.557	Chinchilla_lanigera
ENSMLUG00000011127	RC3H1	96	95.396	ENSCSAG00000011823	RC3H1	85	95.396	Chlorocebus_sabaeus
ENSMLUG00000011127	RC3H1	92	97.339	ENSCPBG00000014670	RC3H1	100	97.339	Chrysemys_picta_bellii
ENSMLUG00000011127	RC3H1	100	95.855	ENSCANG00000032120	RC3H1	100	95.855	Colobus_angolensis_palliatus
ENSMLUG00000011127	RC3H1	100	93.369	ENSCGRG00001020812	Rc3h1	100	92.927	Cricetulus_griseus_chok1gshd
ENSMLUG00000011127	RC3H1	100	93.369	ENSCGRG00000011952	Rc3h1	100	92.927	Cricetulus_griseus_crigri
ENSMLUG00000011127	RC3H1	55	92.765	ENSDNOG00000011494	RC3H1	99	92.765	Dasypus_novemcinctus
ENSMLUG00000011127	RC3H1	100	94.611	ENSDORG00000004855	Rc3h1	100	94.611	Dipodomys_ordii
ENSMLUG00000011127	RC3H1	81	94.132	ENSETEG00000012064	RC3H1	87	94.132	Echinops_telfairi
ENSMLUG00000011127	RC3H1	100	94.081	ENSEASG00005017000	RC3H1	100	94.081	Equus_asinus_asinus
ENSMLUG00000011127	RC3H1	100	93.905	ENSECAG00000021208	RC3H1	100	93.905	Equus_caballus
ENSMLUG00000011127	RC3H1	90	81.818	ENSEEUG00000014861	RC3H1	93	81.818	Erinaceus_europaeus
ENSMLUG00000011127	RC3H1	100	95.675	ENSFCAG00000014924	RC3H1	100	95.675	Felis_catus
ENSMLUG00000011127	RC3H1	100	85.739	ENSFALG00000002947	RC3H1	100	84.588	Ficedula_albicollis
ENSMLUG00000011127	RC3H1	100	93.733	ENSFDAG00000013303	RC3H1	100	93.733	Fukomys_damarensis
ENSMLUG00000011127	RC3H1	100	86.128	ENSGALG00000004587	RC3H1	100	85.589	Gallus_gallus
ENSMLUG00000011127	RC3H1	100	86.216	ENSGAGG00000018194	RC3H1	100	86.040	Gopherus_agassizii
ENSMLUG00000011127	RC3H1	100	89.056	ENSGGOG00000005735	RC3H1	100	89.056	Gorilla_gorilla
ENSMLUG00000011127	RC3H1	88	87.009	ENSHGLG00000004183	-	99	86.957	Heterocephalus_glaber_female
ENSMLUG00000011127	RC3H1	100	92.939	ENSHGLG00100008577	RC3H1	100	92.939	Heterocephalus_glaber_male
ENSMLUG00000011127	RC3H1	100	94.876	ENSSTOG00000016033	RC3H1	100	94.876	Ictidomys_tridecemlineatus
ENSMLUG00000011127	RC3H1	100	93.640	ENSJJAG00000018915	Rc3h1	100	93.375	Jaculus_jaculus
ENSMLUG00000011127	RC3H1	100	75.744	ENSLACG00000016186	RC3H1	100	78.247	Latimeria_chalumnae
ENSMLUG00000011127	RC3H1	97	95.260	ENSLAFG00000004367	RC3H1	100	95.260	Loxodonta_africana
ENSMLUG00000011127	RC3H1	100	95.587	ENSMFAG00000033725	RC3H1	100	95.587	Macaca_fascicularis
ENSMLUG00000011127	RC3H1	100	95.499	ENSMMUG00000000630	RC3H1	100	95.499	Macaca_mulatta
ENSMLUG00000011127	RC3H1	100	95.675	ENSMNEG00000035968	RC3H1	100	95.675	Macaca_nemestrina
ENSMLUG00000011127	RC3H1	100	95.763	ENSMLEG00000037455	RC3H1	100	95.763	Mandrillus_leucophaeus
ENSMLUG00000011127	RC3H1	97	93.239	ENSMAUG00000020864	Rc3h1	100	92.735	Mesocricetus_auratus
ENSMLUG00000011127	RC3H1	100	95.583	ENSMICG00000003000	RC3H1	100	95.583	Microcebus_murinus
ENSMLUG00000011127	RC3H1	93	91.841	ENSMOCG00000016587	Rc3h1	98	91.461	Microtus_ochrogaster
ENSMLUG00000011127	RC3H1	100	90.917	ENSMODG00000004289	RC3H1	100	91.005	Monodelphis_domestica
ENSMLUG00000011127	RC3H1	100	92.573	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.131	Mus_caroli
ENSMLUG00000011127	RC3H1	100	92.396	ENSMUSG00000040423	Rc3h1	100	91.954	Mus_musculus
ENSMLUG00000011127	RC3H1	100	92.396	MGP_PahariEiJ_G0027992	Rc3h1	100	91.954	Mus_pahari
ENSMLUG00000011127	RC3H1	100	92.219	MGP_SPRETEiJ_G0015563	Rc3h1	100	91.777	Mus_spretus
ENSMLUG00000011127	RC3H1	100	94.788	ENSMPUG00000004747	RC3H1	100	94.783	Mustela_putorius_furo
ENSMLUG00000011127	RC3H1	100	94.872	ENSNGAG00000011135	Rc3h1	100	94.430	Nannospalax_galili
ENSMLUG00000011127	RC3H1	100	95.587	ENSNLEG00000015327	RC3H1	100	95.587	Nomascus_leucogenys
ENSMLUG00000011127	RC3H1	99	82.670	ENSOPRG00000013068	RC3H1	99	82.743	Ochotona_princeps
ENSMLUG00000011127	RC3H1	100	93.292	ENSODEG00000014185	RC3H1	100	93.292	Octodon_degus
ENSMLUG00000011127	RC3H1	100	90.131	ENSOANG00000000924	RC3H1	100	90.218	Ornithorhynchus_anatinus
ENSMLUG00000011127	RC3H1	99	94.803	ENSOCUG00000004930	RC3H1	98	94.803	Oryctolagus_cuniculus
ENSMLUG00000011127	RC3H1	100	88.536	ENSOGAG00000004044	RC3H1	100	88.536	Otolemur_garnettii
ENSMLUG00000011127	RC3H1	100	94.825	ENSOARG00000013011	RC3H1	100	94.825	Ovis_aries
ENSMLUG00000011127	RC3H1	100	95.591	ENSPPAG00000039253	RC3H1	100	95.591	Pan_paniscus
ENSMLUG00000011127	RC3H1	100	95.141	ENSPPRG00000009007	RC3H1	100	95.141	Panthera_pardus
ENSMLUG00000011127	RC3H1	100	95.515	ENSPTIG00000015326	RC3H1	100	95.515	Panthera_tigris_altaica
ENSMLUG00000011127	RC3H1	100	95.591	ENSPTRG00000001702	RC3H1	100	95.591	Pan_troglodytes
ENSMLUG00000011127	RC3H1	100	95.587	ENSPANG00000008886	RC3H1	100	95.587	Papio_anubis
ENSMLUG00000011127	RC3H1	100	87.895	ENSPSIG00000016181	RC3H1	100	87.982	Pelodiscus_sinensis
ENSMLUG00000011127	RC3H1	100	92.927	ENSPEMG00000011966	Rc3h1	100	92.396	Peromyscus_maniculatus_bairdii
ENSMLUG00000011127	RC3H1	70	92.541	ENSPCIG00000002058	RC3H1	95	97.758	Phascolarctos_cinereus
ENSMLUG00000011127	RC3H1	100	92.321	ENSPPYG00000000490	RC3H1	98	94.545	Pongo_abelii
ENSMLUG00000011127	RC3H1	80	92.105	ENSPCAG00000010775	RC3H1	87	92.105	Procavia_capensis
ENSMLUG00000011127	RC3H1	82	95.080	ENSPCOG00000021795	RC3H1	96	95.080	Propithecus_coquereli
ENSMLUG00000011127	RC3H1	100	87.191	ENSPVAG00000007593	RC3H1	100	87.191	Pteropus_vampyrus
ENSMLUG00000011127	RC3H1	97	61.470	ENSPNAG00000023439	rc3h1a	95	91.667	Pygocentrus_nattereri
ENSMLUG00000011127	RC3H1	100	95.591	ENSRBIG00000037743	RC3H1	100	95.591	Rhinopithecus_bieti
ENSMLUG00000011127	RC3H1	100	95.499	ENSRROG00000036546	RC3H1	100	95.499	Rhinopithecus_roxellana
ENSMLUG00000011127	RC3H1	93	86.825	ENSSBOG00000010664	RC3H1	100	89.110	Saimiri_boliviensis_boliviensis
ENSMLUG00000011127	RC3H1	100	90.220	ENSSHAG00000007589	RC3H1	100	90.308	Sarcophilus_harrisii
ENSMLUG00000011127	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSMLUG00000011127	RC3H1	100	83.523	ENSSPUG00000018472	RC3H1	100	82.807	Sphenodon_punctatus
ENSMLUG00000011127	RC3H1	100	95.671	ENSSSCG00000015498	RC3H1	100	95.671	Sus_scrofa
ENSMLUG00000011127	RC3H1	100	86.204	ENSTGUG00000004090	RC3H1	100	85.488	Taeniopygia_guttata
ENSMLUG00000011127	RC3H1	93	89.655	ENSTBEG00000005015	RC3H1	93	89.655	Tupaia_belangeri
ENSMLUG00000011127	RC3H1	100	94.537	ENSTTRG00000008572	RC3H1	100	94.537	Tursiops_truncatus
ENSMLUG00000011127	RC3H1	100	95.115	ENSUAMG00000019525	RC3H1	100	95.115	Ursus_americanus
ENSMLUG00000011127	RC3H1	100	95.146	ENSUMAG00000020087	RC3H1	100	95.146	Ursus_maritimus
ENSMLUG00000011127	RC3H1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSMLUG00000011127	RC3H1	100	95.246	ENSVVUG00000014201	RC3H1	100	95.246	Vulpes_vulpes
ENSMLUG00000011127	RC3H1	100	77.845	ENSXETG00000020030	rc3h1	100	77.217	Xenopus_tropicalis