EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000011140 (Gene tree)
Gene ID: 102423501
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 11696 bases
Position: chrGL429922:1961630-1973325
Accession: 102423501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000010148	RRM_1	PF00076.22	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000011133	RBM38-201	651	XM_006095418	ENSMLUP00000010148	216 (aa)	XP_006095480	G1PHJ3

Gene Model

Click here to download ENSMLUG00000011140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000011140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000011140	RBM38	67	32.787	ENSMLUG00000010313	MSI1	80	32.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000011140	RBM38	100	92.130	ENSG00000132819	RBM38	94	96.552	Homo_sapiens
ENSMLUG00000011140	RBM38	98	58.547	ENSAPOG00000003301	rbm38	91	58.547	Acanthochromis_polyacanthus
ENSMLUG00000011140	RBM38	100	66.516	ENSAPOG00000009939	-	94	67.117	Acanthochromis_polyacanthus
ENSMLUG00000011140	RBM38	98	57.082	ENSACIG00000000010	rbm38	91	57.082	Amphilophus_citrinellus
ENSMLUG00000011140	RBM38	98	68.807	ENSACIG00000012502	-	100	86.325	Amphilophus_citrinellus
ENSMLUG00000011140	RBM38	99	65.909	ENSAOCG00000012559	RBM38	94	63.755	Amphiprion_ocellaris
ENSMLUG00000011140	RBM38	98	58.547	ENSAOCG00000013497	-	91	58.547	Amphiprion_ocellaris
ENSMLUG00000011140	RBM38	98	61.395	ENSAPEG00000013137	rbm38	91	58.547	Amphiprion_percula
ENSMLUG00000011140	RBM38	100	62.288	ENSAPEG00000023581	-	95	64.135	Amphiprion_percula
ENSMLUG00000011140	RBM38	100	60.619	ENSATEG00000016366	rbm38	94	60.619	Anabas_testudineus
ENSMLUG00000011140	RBM38	98	63.478	ENSATEG00000016710	-	92	65.368	Anabas_testudineus
ENSMLUG00000011140	RBM38	100	74.886	ENSACAG00000016238	RBM38	90	74.886	Anolis_carolinensis
ENSMLUG00000011140	RBM38	100	90.741	ENSANAG00000031959	RBM38	100	90.741	Aotus_nancymaae
ENSMLUG00000011140	RBM38	98	65.652	ENSACLG00000019514	-	92	66.667	Astatotilapia_calliptera
ENSMLUG00000011140	RBM38	86	61.622	ENSAMXG00000038120	rbm38	76	62.162	Astyanax_mexicanus
ENSMLUG00000011140	RBM38	100	66.087	ENSAMXG00000015601	-	94	65.502	Astyanax_mexicanus
ENSMLUG00000011140	RBM38	100	91.667	ENSBTAG00000008105	RBM38	90	91.667	Bos_taurus
ENSMLUG00000011140	RBM38	64	60.145	WBGene00006321	sup-12	59	83.146	Caenorhabditis_elegans
ENSMLUG00000011140	RBM38	100	90.741	ENSCJAG00000019139	RBM38	90	90.741	Callithrix_jacchus
ENSMLUG00000011140	RBM38	100	90.741	ENSCAFG00020021943	RBM38	90	90.741	Canis_lupus_dingo
ENSMLUG00000011140	RBM38	100	91.204	ENSCHIG00000002609	RBM38	90	91.204	Capra_hircus
ENSMLUG00000011140	RBM38	100	90.278	ENSCPOG00000012781	RBM38	90	90.278	Cavia_porcellus
ENSMLUG00000011140	RBM38	100	90.741	ENSCCAG00000036872	RBM38	90	90.741	Cebus_capucinus
ENSMLUG00000011140	RBM38	100	91.667	ENSCATG00000032133	RBM38	90	91.667	Cercocebus_atys
ENSMLUG00000011140	RBM38	100	90.278	ENSCLAG00000005906	RBM38	94	90.278	Chinchilla_lanigera
ENSMLUG00000011140	RBM38	100	91.667	ENSCSAG00000015503	RBM38	90	91.667	Chlorocebus_sabaeus
ENSMLUG00000011140	RBM38	100	78.440	ENSCPBG00000024059	RBM38	100	78.440	Chrysemys_picta_bellii
ENSMLUG00000011140	RBM38	70	61.392	ENSCSAVG00000001132	-	59	61.392	Ciona_savignyi
ENSMLUG00000011140	RBM38	100	68.519	ENSCANG00000030105	-	79	68.519	Colobus_angolensis_palliatus
ENSMLUG00000011140	RBM38	100	88.889	ENSCGRG00001012928	Rbm38	91	88.889	Cricetulus_griseus_chok1gshd
ENSMLUG00000011140	RBM38	69	66.667	ENSCSEG00000020943	rbm38	60	60.326	Cynoglossus_semilaevis
ENSMLUG00000011140	RBM38	98	68.807	ENSCSEG00000004701	-	93	69.863	Cynoglossus_semilaevis
ENSMLUG00000011140	RBM38	98	56.897	ENSCVAG00000015952	rbm38	91	58.621	Cyprinodon_variegatus
ENSMLUG00000011140	RBM38	98	64.069	ENSCVAG00000005472	-	92	64.502	Cyprinodon_variegatus
ENSMLUG00000011140	RBM38	98	64.126	ENSDARG00000058818	rbm38	92	64.126	Danio_rerio
ENSMLUG00000011140	RBM38	100	85.185	ENSDNOG00000032004	RBM38	100	85.185	Dasypus_novemcinctus
ENSMLUG00000011140	RBM38	63	67.153	ENSEBUG00000015164	rbm38	83	67.153	Eptatretus_burgeri
ENSMLUG00000011140	RBM38	100	91.204	ENSECAG00000007700	RBM38	90	91.204	Equus_caballus
ENSMLUG00000011140	RBM38	100	88.018	ENSEEUG00000013489	RBM38	91	89.401	Erinaceus_europaeus
ENSMLUG00000011140	RBM38	93	64.179	ENSELUG00000000585	-	87	64.179	Esox_lucius
ENSMLUG00000011140	RBM38	100	65.254	ENSELUG00000005849	-	95	65.254	Esox_lucius
ENSMLUG00000011140	RBM38	100	92.130	ENSFCAG00000042916	RBM38	90	92.130	Felis_catus
ENSMLUG00000011140	RBM38	80	80.925	ENSFALG00000010805	RBM38	90	80.925	Ficedula_albicollis
ENSMLUG00000011140	RBM38	98	57.265	ENSFHEG00000017748	rbm38	91	57.265	Fundulus_heteroclitus
ENSMLUG00000011140	RBM38	98	70.233	ENSFHEG00000006160	-	92	70.233	Fundulus_heteroclitus
ENSMLUG00000011140	RBM38	83	70.166	ENSGMOG00000016655	-	96	73.626	Gadus_morhua
ENSMLUG00000011140	RBM38	100	77.064	ENSGALG00000026081	RBM38	100	77.523	Gallus_gallus
ENSMLUG00000011140	RBM38	98	62.264	ENSGACG00000015224	rbm38	98	62.264	Gasterosteus_aculeatus
ENSMLUG00000011140	RBM38	99	65.766	ENSGACG00000009873	-	100	66.368	Gasterosteus_aculeatus
ENSMLUG00000011140	RBM38	100	79.358	ENSGAGG00000001187	RBM38	100	79.358	Gopherus_agassizii
ENSMLUG00000011140	RBM38	100	60.538	ENSHBUG00000012058	rbm38	92	60.538	Haplochromis_burtoni
ENSMLUG00000011140	RBM38	98	69.585	ENSHBUG00000011778	-	92	70.642	Haplochromis_burtoni
ENSMLUG00000011140	RBM38	100	88.426	ENSHGLG00000015077	RBM38	90	88.426	Heterocephalus_glaber_female
ENSMLUG00000011140	RBM38	85	72.973	ENSHCOG00000005622	-	52	74.054	Hippocampus_comes
ENSMLUG00000011140	RBM38	69	65.563	ENSHCOG00000019040	rbm38	65	65.563	Hippocampus_comes
ENSMLUG00000011140	RBM38	100	63.636	ENSIPUG00000019349	-	94	63.636	Ictalurus_punctatus
ENSMLUG00000011140	RBM38	98	55.085	ENSKMAG00000012402	rbm38	98	55.508	Kryptolebias_marmoratus
ENSMLUG00000011140	RBM38	98	68.203	ENSLBEG00000016163	RBM38	92	69.266	Labrus_bergylta
ENSMLUG00000011140	RBM38	98	57.940	ENSLBEG00000018878	rbm38	91	57.940	Labrus_bergylta
ENSMLUG00000011140	RBM38	98	70.776	ENSLOCG00000003456	rbm38	92	70.776	Lepisosteus_oculatus
ENSMLUG00000011140	RBM38	100	91.667	ENSMFAG00000043808	RBM38	90	91.667	Macaca_fascicularis
ENSMLUG00000011140	RBM38	100	91.667	ENSMMUG00000031391	RBM38	90	91.667	Macaca_mulatta
ENSMLUG00000011140	RBM38	100	91.667	ENSMNEG00000034683	RBM38	90	91.667	Macaca_nemestrina
ENSMLUG00000011140	RBM38	50	80.734	ENSMLEG00000043261	-	88	80.734	Mandrillus_leucophaeus
ENSMLUG00000011140	RBM38	100	62.553	ENSMAMG00000020499	RBM38	95	64.407	Mastacembelus_armatus
ENSMLUG00000011140	RBM38	98	58.369	ENSMAMG00000024135	rbm38	91	58.369	Mastacembelus_armatus
ENSMLUG00000011140	RBM38	98	57.511	ENSMZEG00005026036	rbm38	91	57.511	Maylandia_zebra
ENSMLUG00000011140	RBM38	98	69.585	ENSMZEG00005000849	-	92	70.642	Maylandia_zebra
ENSMLUG00000011140	RBM38	100	89.352	ENSMAUG00000021211	Rbm38	91	89.352	Mesocricetus_auratus
ENSMLUG00000011140	RBM38	100	90.741	ENSMICG00000038011	RBM38	100	90.741	Microcebus_murinus
ENSMLUG00000011140	RBM38	100	89.815	ENSMOCG00000008715	Rbm38	91	89.815	Microtus_ochrogaster
ENSMLUG00000011140	RBM38	98	68.224	ENSMMOG00000020051	-	90	69.302	Mola_mola
ENSMLUG00000011140	RBM38	100	79.358	ENSMODG00000016458	RBM38	92	79.358	Monodelphis_domestica
ENSMLUG00000011140	RBM38	83	74.725	ENSMALG00000004680	RBM38	67	74.725	Monopterus_albus
ENSMLUG00000011140	RBM38	71	67.949	ENSMALG00000022327	rbm38	67	67.949	Monopterus_albus
ENSMLUG00000011140	RBM38	100	90.741	MGP_CAROLIEiJ_G0024745	Rbm38	91	90.741	Mus_caroli
ENSMLUG00000011140	RBM38	100	91.204	ENSMUSG00000027510	Rbm38	91	91.204	Mus_musculus
ENSMLUG00000011140	RBM38	100	89.815	MGP_PahariEiJ_G0026186	Rbm38	91	89.815	Mus_pahari
ENSMLUG00000011140	RBM38	100	90.741	MGP_SPRETEiJ_G0025665	Rbm38	91	90.741	Mus_spretus
ENSMLUG00000011140	RBM38	86	93.514	ENSMPUG00000006518	RBM38	93	93.583	Mustela_putorius_furo
ENSMLUG00000011140	RBM38	98	65.217	ENSNBRG00000022545	-	92	66.234	Neolamprologus_brichardi
ENSMLUG00000011140	RBM38	100	60.714	ENSNBRG00000022685	rbm38	91	60.714	Neolamprologus_brichardi
ENSMLUG00000011140	RBM38	53	83.478	ENSMEUG00000005475	-	86	83.478	Notamacropus_eugenii
ENSMLUG00000011140	RBM38	100	91.204	ENSODEG00000007980	RBM38	90	91.204	Octodon_degus
ENSMLUG00000011140	RBM38	98	65.066	ENSONIG00000020324	-	92	66.087	Oreochromis_niloticus
ENSMLUG00000011140	RBM38	98	57.759	ENSONIG00000017073	rbm38	93	57.759	Oreochromis_niloticus
ENSMLUG00000011140	RBM38	100	76.852	ENSOANG00000009259	RBM38	83	76.852	Ornithorhynchus_anatinus
ENSMLUG00000011140	RBM38	98	62.500	ENSORLG00000027180	-	92	63.948	Oryzias_latipes
ENSMLUG00000011140	RBM38	98	55.983	ENSORLG00000012154	rbm38	76	62.564	Oryzias_latipes
ENSMLUG00000011140	RBM38	98	62.500	ENSORLG00020020751	-	92	63.948	Oryzias_latipes_hni
ENSMLUG00000011140	RBM38	88	62.564	ENSORLG00020017871	rbm38	76	62.564	Oryzias_latipes_hni
ENSMLUG00000011140	RBM38	98	61.905	ENSORLG00015017040	-	92	64.224	Oryzias_latipes_hsok
ENSMLUG00000011140	RBM38	99	60.092	ENSORLG00015012606	rbm38	90	60.092	Oryzias_latipes_hsok
ENSMLUG00000011140	RBM38	88	62.051	ENSOMEG00000006805	rbm38	76	62.051	Oryzias_melastigma
ENSMLUG00000011140	RBM38	98	61.304	ENSOMEG00000023912	-	92	64.069	Oryzias_melastigma
ENSMLUG00000011140	RBM38	100	91.667	ENSOGAG00000029136	RBM38	90	91.667	Otolemur_garnettii
ENSMLUG00000011140	RBM38	100	92.130	ENSPPRG00000009507	RBM38	90	92.130	Panthera_pardus
ENSMLUG00000011140	RBM38	57	96.774	ENSPTRG00000045845	-	68	96.774	Pan_troglodytes
ENSMLUG00000011140	RBM38	94	90.196	ENSPTRG00000013661	RBM38	98	90.196	Pan_troglodytes
ENSMLUG00000011140	RBM38	98	73.585	ENSPANG00000033127	-	92	72.430	Papio_anubis
ENSMLUG00000011140	RBM38	100	91.667	ENSPANG00000020919	-	90	91.667	Papio_anubis
ENSMLUG00000011140	RBM38	98	63.436	ENSPKIG00000025417	rbm38	92	64.317	Paramormyrops_kingsleyae
ENSMLUG00000011140	RBM38	98	66.977	ENSPKIG00000018122	-	100	85.470	Paramormyrops_kingsleyae
ENSMLUG00000011140	RBM38	100	77.982	ENSPSIG00000011649	RBM38	92	77.982	Pelodiscus_sinensis
ENSMLUG00000011140	RBM38	98	62.821	ENSPMGG00000017094	-	92	63.830	Periophthalmus_magnuspinnatus
ENSMLUG00000011140	RBM38	100	56.612	ENSPMGG00000011343	rbm38	94	57.025	Periophthalmus_magnuspinnatus
ENSMLUG00000011140	RBM38	100	79.817	ENSPCIG00000013648	RBM38	92	79.817	Phascolarctos_cinereus
ENSMLUG00000011140	RBM38	98	53.846	ENSPFOG00000011658	rbm38	91	57.692	Poecilia_formosa
ENSMLUG00000011140	RBM38	98	55.128	ENSPLAG00000005218	rbm38	91	57.692	Poecilia_latipinna
ENSMLUG00000011140	RBM38	98	64.255	ENSPLAG00000002500	-	92	64.681	Poecilia_latipinna
ENSMLUG00000011140	RBM38	98	54.274	ENSPMEG00000015770	rbm38	91	57.692	Poecilia_mexicana
ENSMLUG00000011140	RBM38	98	54.701	ENSPREG00000007398	rbm38	91	58.120	Poecilia_reticulata
ENSMLUG00000011140	RBM38	100	89.815	ENSPCOG00000026201	RBM38	90	89.815	Propithecus_coquereli
ENSMLUG00000011140	RBM38	100	63.889	ENSPVAG00000006457	RBM38	91	63.889	Pteropus_vampyrus
ENSMLUG00000011140	RBM38	98	69.585	ENSPNYG00000019727	-	100	87.179	Pundamilia_nyererei
ENSMLUG00000011140	RBM38	98	59.722	ENSPNYG00000021373	rbm38	89	61.009	Pundamilia_nyererei
ENSMLUG00000011140	RBM38	99	62.054	ENSPNAG00000010596	rbm38	93	62.054	Pygocentrus_nattereri
ENSMLUG00000011140	RBM38	100	64.629	ENSPNAG00000015123	-	96	75.758	Pygocentrus_nattereri
ENSMLUG00000011140	RBM38	100	91.204	ENSRNOG00000006420	Rbm38	91	91.204	Rattus_norvegicus
ENSMLUG00000011140	RBM38	100	74.074	ENSRROG00000036388	-	89	74.074	Rhinopithecus_roxellana
ENSMLUG00000011140	RBM38	100	89.815	ENSSBOG00000031053	RBM38	100	89.815	Saimiri_boliviensis_boliviensis
ENSMLUG00000011140	RBM38	98	65.909	ENSSFOG00015004453	rbm38	92	69.545	Scleropages_formosus
ENSMLUG00000011140	RBM38	98	64.935	ENSSDUG00000021082	RBM38	92	65.801	Seriola_dumerili
ENSMLUG00000011140	RBM38	98	58.798	ENSSDUG00000022611	rbm38	91	58.798	Seriola_dumerili
ENSMLUG00000011140	RBM38	98	63.426	ENSSLDG00000010845	rbm38	90	63.426	Seriola_lalandi_dorsalis
ENSMLUG00000011140	RBM38	98	64.935	ENSSLDG00000011778	RBM38	92	65.801	Seriola_lalandi_dorsalis
ENSMLUG00000011140	RBM38	98	66.197	ENSSPAG00000020989	RBM38	91	67.757	Stegastes_partitus
ENSMLUG00000011140	RBM38	98	57.872	ENSSPAG00000011113	rbm38	91	57.872	Stegastes_partitus
ENSMLUG00000011140	RBM38	100	92.130	ENSSSCG00000007504	RBM38	90	92.130	Sus_scrofa
ENSMLUG00000011140	RBM38	98	64.502	ENSTRUG00000019869	-	92	66.379	Takifugu_rubripes
ENSMLUG00000011140	RBM38	98	55.022	ENSTRUG00000024954	rbm38	91	55.459	Takifugu_rubripes
ENSMLUG00000011140	RBM38	98	68.636	ENSTNIG00000007093	-	97	69.683	Tetraodon_nigroviridis
ENSMLUG00000011140	RBM38	100	91.204	ENSUAMG00000019780	RBM38	90	91.204	Ursus_americanus
ENSMLUG00000011140	RBM38	100	90.741	ENSVVUG00000017246	RBM38	90	90.741	Vulpes_vulpes
ENSMLUG00000011140	RBM38	100	72.973	ENSXETG00000011268	rbm38	99	74.324	Xenopus_tropicalis
ENSMLUG00000011140	RBM38	52	84.615	ENSXCOG00000017324	-	53	84.615	Xiphophorus_couchianus
ENSMLUG00000011140	RBM38	98	56.652	ENSXMAG00000023662	rbm38	91	57.940	Xiphophorus_maculatus