EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000011472 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 40226 bases
Position: chrGL431054:5012-45237
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000010479	RRM_1	PF00076.22	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000011502	SCAF4-201	3480	XM_006107640	ENSMLUP00000010479	1159 (aa)	-	G1PIF2

Gene Model

Click here to download ENSMLUG00000011472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000011472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000011472	SCAF4	79	83.424	ENSG00000156304	SCAF4	99	77.639	Homo_sapiens
ENSMLUG00000011472	SCAF4	52	83.967	ENSAMEG00000014987	SCAF4	96	76.606	Ailuropoda_melanoleuca
ENSMLUG00000011472	SCAF4	99	67.827	ENSAPLG00000002509	SCAF4	59	74.674	Anas_platyrhynchos
ENSMLUG00000011472	SCAF4	99	58.590	ENSACAG00000002569	SCAF4	62	65.489	Anolis_carolinensis
ENSMLUG00000011472	SCAF4	99	77.527	ENSANAG00000037494	SCAF4	99	77.243	Aotus_nancymaae
ENSMLUG00000011472	SCAF4	79	83.207	ENSBTAG00000018855	SCAF4	99	78.806	Bos_taurus
ENSMLUG00000011472	SCAF4	99	77.956	ENSCJAG00000008993	SCAF4	99	82.955	Callithrix_jacchus
ENSMLUG00000011472	SCAF4	78	85.385	ENSCAFG00000008863	SCAF4	99	79.424	Canis_familiaris
ENSMLUG00000011472	SCAF4	87	82.447	ENSCAFG00020026019	SCAF4	85	95.092	Canis_lupus_dingo
ENSMLUG00000011472	SCAF4	79	82.524	ENSCHIG00000008385	SCAF4	99	78.000	Capra_hircus
ENSMLUG00000011472	SCAF4	99	76.943	ENSCPOG00000012443	SCAF4	99	77.145	Cavia_porcellus
ENSMLUG00000011472	SCAF4	99	77.554	ENSCCAG00000033727	SCAF4	99	77.352	Cebus_capucinus
ENSMLUG00000011472	SCAF4	79	83.315	ENSCATG00000030379	SCAF4	99	77.565	Cercocebus_atys
ENSMLUG00000011472	SCAF4	77	81.502	ENSCLAG00000006298	SCAF4	99	74.234	Chinchilla_lanigera
ENSMLUG00000011472	SCAF4	79	82.900	ENSCSAG00000009438	SCAF4	99	76.968	Chlorocebus_sabaeus
ENSMLUG00000011472	SCAF4	79	83.532	ENSCANG00000029847	SCAF4	99	77.870	Colobus_angolensis_palliatus
ENSMLUG00000011472	SCAF4	78	78.496	ENSCGRG00001020821	Scaf4	63	76.478	Cricetulus_griseus_chok1gshd
ENSMLUG00000011472	SCAF4	77	77.801	ENSCGRG00000014360	Scaf4	63	76.478	Cricetulus_griseus_crigri
ENSMLUG00000011472	SCAF4	79	78.850	ENSDNOG00000019014	SCAF4	94	74.310	Dasypus_novemcinctus
ENSMLUG00000011472	SCAF4	78	70.238	ENSETEG00000000583	SCAF4	99	68.024	Echinops_telfairi
ENSMLUG00000011472	SCAF4	79	83.713	ENSEASG00005007756	SCAF4	99	78.261	Equus_asinus_asinus
ENSMLUG00000011472	SCAF4	79	83.605	ENSECAG00000014248	SCAF4	99	78.195	Equus_caballus
ENSMLUG00000011472	SCAF4	57	49.832	ENSELUG00000002779	SCAF8	61	63.380	Esox_lucius
ENSMLUG00000011472	SCAF4	79	83.603	ENSFCAG00000002228	SCAF4	99	78.548	Felis_catus
ENSMLUG00000011472	SCAF4	77	80.173	ENSFDAG00000017780	SCAF4	99	74.792	Fukomys_damarensis
ENSMLUG00000011472	SCAF4	77	72.606	ENSGALG00000033965	SCAF4	59	73.286	Gallus_gallus
ENSMLUG00000011472	SCAF4	79	78.553	ENSGGOG00000015557	SCAF4	99	80.256	Gorilla_gorilla
ENSMLUG00000011472	SCAF4	78	80.952	ENSHGLG00000010582	SCAF4	99	74.730	Heterocephalus_glaber_female
ENSMLUG00000011472	SCAF4	77	81.196	ENSHGLG00100009441	SCAF4	99	74.896	Heterocephalus_glaber_male
ENSMLUG00000011472	SCAF4	68	59.067	ENSIPUG00000011285	scaf4	51	75.625	Ictalurus_punctatus
ENSMLUG00000011472	SCAF4	77	76.711	ENSSTOG00000004450	SCAF4	99	73.282	Ictidomys_tridecemlineatus
ENSMLUG00000011472	SCAF4	77	81.257	ENSJJAG00000019447	Scaf4	99	74.621	Jaculus_jaculus
ENSMLUG00000011472	SCAF4	61	55.951	ENSLACG00000013913	SCAF4	59	62.974	Latimeria_chalumnae
ENSMLUG00000011472	SCAF4	55	48.722	ENSLOCG00000009162	scaf4a	59	60.679	Lepisosteus_oculatus
ENSMLUG00000011472	SCAF4	78	83.917	ENSLAFG00000010710	SCAF4	99	78.614	Loxodonta_africana
ENSMLUG00000011472	SCAF4	79	83.315	ENSMFAG00000037668	SCAF4	99	76.961	Macaca_fascicularis
ENSMLUG00000011472	SCAF4	79	83.207	ENSMMUG00000001712	SCAF4	99	77.352	Macaca_mulatta
ENSMLUG00000011472	SCAF4	79	83.315	ENSMNEG00000032966	SCAF4	99	76.898	Macaca_nemestrina
ENSMLUG00000011472	SCAF4	78	84.009	ENSMLEG00000039674	SCAF4	99	77.898	Mandrillus_leucophaeus
ENSMLUG00000011472	SCAF4	77	72.272	ENSMGAG00000014515	SCAF4	59	74.240	Meleagris_gallopavo
ENSMLUG00000011472	SCAF4	77	80.947	ENSMAUG00000013307	Scaf4	99	75.212	Mesocricetus_auratus
ENSMLUG00000011472	SCAF4	79	82.736	ENSMICG00000005256	SCAF4	99	77.193	Microcebus_murinus
ENSMLUG00000011472	SCAF4	70	90.108	ENSMOCG00000012087	Scaf4	96	77.524	Microtus_ochrogaster
ENSMLUG00000011472	SCAF4	99	69.040	ENSMODG00000021040	SCAF4	97	71.354	Monodelphis_domestica
ENSMLUG00000011472	SCAF4	78	78.311	MGP_CAROLIEiJ_G0020944	Scaf4	99	73.453	Mus_caroli
ENSMLUG00000011472	SCAF4	78	77.894	ENSMUSG00000022983	Scaf4	99	73.714	Mus_musculus
ENSMLUG00000011472	SCAF4	78	78.556	MGP_SPRETEiJ_G0021850	Scaf4	99	73.792	Mus_spretus
ENSMLUG00000011472	SCAF4	79	84.783	ENSMPUG00000001078	SCAF4	99	78.877	Mustela_putorius_furo
ENSMLUG00000011472	SCAF4	77	82.418	ENSNGAG00000005214	Scaf4	96	76.042	Nannospalax_galili
ENSMLUG00000011472	SCAF4	79	83.099	ENSNLEG00000003569	SCAF4	99	77.556	Nomascus_leucogenys
ENSMLUG00000011472	SCAF4	75	89.706	ENSOPRG00000007016	SCAF4	85	69.444	Ochotona_princeps
ENSMLUG00000011472	SCAF4	78	80.107	ENSODEG00000002718	SCAF4	71	73.129	Octodon_degus
ENSMLUG00000011472	SCAF4	68	56.777	ENSONIG00000004687	scaf4a	50	73.214	Oreochromis_niloticus
ENSMLUG00000011472	SCAF4	79	80.022	ENSOCUG00000008336	SCAF4	99	73.284	Oryctolagus_cuniculus
ENSMLUG00000011472	SCAF4	77	74.477	ENSOGAG00000014653	SCAF4	99	70.997	Otolemur_garnettii
ENSMLUG00000011472	SCAF4	77	83.279	ENSOARG00000013894	SCAF4	98	78.643	Ovis_aries
ENSMLUG00000011472	SCAF4	79	83.424	ENSPPAG00000028535	SCAF4	99	77.639	Pan_paniscus
ENSMLUG00000011472	SCAF4	78	84.153	ENSPPRG00000000635	SCAF4	99	78.415	Panthera_pardus
ENSMLUG00000011472	SCAF4	76	82.902	ENSPTIG00000021578	SCAF4	99	76.376	Panthera_tigris_altaica
ENSMLUG00000011472	SCAF4	79	83.424	ENSPTRG00000013848	SCAF4	99	77.639	Pan_troglodytes
ENSMLUG00000011472	SCAF4	79	83.315	ENSPANG00000017332	SCAF4	99	77.899	Papio_anubis
ENSMLUG00000011472	SCAF4	99	69.468	ENSPSIG00000014242	SCAF4	57	75.036	Pelodiscus_sinensis
ENSMLUG00000011472	SCAF4	63	76.788	ENSPCIG00000028183	SCAF4	88	69.877	Phascolarctos_cinereus
ENSMLUG00000011472	SCAF4	68	54.315	ENSPFOG00000017156	scaf4a	53	70.833	Poecilia_formosa
ENSMLUG00000011472	SCAF4	79	83.207	ENSPPYG00000011355	SCAF4	99	77.983	Pongo_abelii
ENSMLUG00000011472	SCAF4	99	72.612	ENSPCAG00000009998	SCAF4	93	87.189	Procavia_capensis
ENSMLUG00000011472	SCAF4	79	82.972	ENSPCOG00000018710	SCAF4	99	76.846	Propithecus_coquereli
ENSMLUG00000011472	SCAF4	79	84.256	ENSPVAG00000005220	SCAF4	99	77.955	Pteropus_vampyrus
ENSMLUG00000011472	SCAF4	59	91.667	ENSRNOG00000002104	Scaf4	91	81.096	Rattus_norvegicus
ENSMLUG00000011472	SCAF4	77	81.567	ENSRBIG00000040007	SCAF4	99	76.111	Rhinopithecus_bieti
ENSMLUG00000011472	SCAF4	79	83.315	ENSRROG00000029488	SCAF4	99	77.852	Rhinopithecus_roxellana
ENSMLUG00000011472	SCAF4	99	72.279	ENSSHAG00000001581	SCAF4	97	72.597	Sarcophilus_harrisii
ENSMLUG00000011472	SCAF4	79	81.828	ENSSARG00000009994	SCAF4	99	75.851	Sorex_araneus
ENSMLUG00000011472	SCAF4	79	80.881	ENSSSCG00000021023	SCAF4	99	74.856	Sus_scrofa
ENSMLUG00000011472	SCAF4	76	67.011	ENSTGUG00000013464	SCAF4	62	68.707	Taeniopygia_guttata
ENSMLUG00000011472	SCAF4	76	83.687	ENSTTRG00000010963	SCAF4	99	77.515	Tursiops_truncatus
ENSMLUG00000011472	SCAF4	79	81.630	ENSUAMG00000008860	SCAF4	99	76.406	Ursus_americanus
ENSMLUG00000011472	SCAF4	99	76.546	ENSUMAG00000016962	SCAF4	99	78.120	Ursus_maritimus
ENSMLUG00000011472	SCAF4	77	85.304	ENSVVUG00000002953	SCAF4	99	79.337	Vulpes_vulpes
ENSMLUG00000011472	SCAF4	66	59.878	ENSXETG00000007351	scaf4	63	62.678	Xenopus_tropicalis