EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMLUG00000012068 (Gene tree)
Gene ID
102439041
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Myotis_lucifugus
Status
putative
Strand
Plus strand
Length
15340 bases
Position
chrGL430027:135790-151129
Accession
102439041
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMLUP00000010997PABPPF00658.181.2e-3111
ENSMLUP00000010997RRM_5PF13893.61.7e-0912
ENSMLUP00000010997RRM_5PF13893.61.7e-0922
ENSMLUP00000010997RRM_1PF00076.222.7e-9314
ENSMLUP00000010997RRM_1PF00076.222.7e-9324
ENSMLUP00000010997RRM_1PF00076.222.7e-9334
ENSMLUP00000010997RRM_1PF00076.222.7e-9344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMLUT00000012071PABPC4-2012211XM_006099114ENSMLUP00000010997615 (aa)XP_006099176G1PJR0
Gene Model
Click here to download ENSMLUG00000012068's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000012068's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMLUG00000012068PABPC45930.000ENSMLUG00000008101-9230.000
ENSMLUG00000012068PABPC49874.682ENSMLUG00000012245PABPC19874.522
ENSMLUG00000012068PABPC49855.267ENSMLUG00000030069-9754.943
ENSMLUG00000012068PABPC46034.940ENSMLUG00000014210ELAVL28734.940
ENSMLUG00000012068PABPC46268.493ENSMLUG00000008254PABPC4L9968.493
ENSMLUG00000012068PABPC49762.179ENSMLUG00000006324PABPC1L9862.179
ENSMLUG00000012068PABPC45530.864ENSMLUG00000012683-5031.788
ENSMLUG00000012068PABPC46030.464ENSMLUG00000030062-8830.464
ENSMLUG00000012068PABPC46168.539ENSMLUG00000008244PABPC59668.320
ENSMLUG00000012068PABPC45938.158ENSMLUG00000005791CELF25938.158
ENSMLUG00000012068PABPC46133.735ENSMLUG00000016320ELAVL39233.735
ENSMLUG00000012068PABPC46130.625ENSMLUG00000006226ELAVL48930.625
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMLUG00000012068PABPC410099.187ENSG00000090621PABPC4100100.000Homo_sapiens
ENSMLUG00000012068PABPC49984.578ENSAPOG00000001161pabpc410084.689Acanthochromis_polyacanthus
ENSMLUG00000012068PABPC49857.119ENSAMEG00000015083-9956.792Ailuropoda_melanoleuca
ENSMLUG00000012068PABPC410092.424ENSAMEG00000011535-10092.424Ailuropoda_melanoleuca
ENSMLUG00000012068PABPC410084.019ENSACIG00000023343pabpc410084.652Amphilophus_citrinellus
ENSMLUG00000012068PABPC49984.740ENSAOCG00000021529pabpc410084.848Amphiprion_ocellaris
ENSMLUG00000012068PABPC49984.740ENSAPEG00000019196pabpc410084.848Amphiprion_percula
ENSMLUG00000012068PABPC49984.330ENSATEG00000007402pabpc410084.713Anabas_testudineus
ENSMLUG00000012068PABPC49989.683ENSAPLG00000009729-10089.683Anas_platyrhynchos
ENSMLUG00000012068PABPC49988.014ENSACAG00000002544PABPC410088.014Anolis_carolinensis
ENSMLUG00000012068PABPC410096.513ENSANAG00000025079PABPC410096.513Aotus_nancymaae
ENSMLUG00000012068PABPC410084.076ENSACLG00000019558pabpc410084.713Astatotilapia_calliptera
ENSMLUG00000012068PABPC49978.503ENSAMXG00000018779pabpc49979.299Astyanax_mexicanus
ENSMLUG00000012068PABPC45986.826ENSBTAG00000048536-9886.826Bos_taurus
ENSMLUG00000012068PABPC410094.419ENSBTAG00000017125PABPC410094.419Bos_taurus
ENSMLUG00000012068PABPC410096.355ENSCJAG00000002512-10096.355Callithrix_jacchus
ENSMLUG00000012068PABPC47788.843ENSCJAG00000045953-9288.797Callithrix_jacchus
ENSMLUG00000012068PABPC410096.830ENSCAFG00000003081PABPC410096.830Canis_familiaris
ENSMLUG00000012068PABPC410092.576ENSCAFG00020004161PABPC410092.576Canis_lupus_dingo
ENSMLUG00000012068PABPC410092.273ENSCHIG00000019398-10092.273Capra_hircus
ENSMLUG00000012068PABPC410075.705ENSCHIG00000023385-10075.705Capra_hircus
ENSMLUG00000012068PABPC410096.513ENSTSYG00000006532PABPC410096.513Carlito_syrichta
ENSMLUG00000012068PABPC49996.184ENSCAPG00000015984PABPC410096.184Cavia_aperea
ENSMLUG00000012068PABPC410096.197ENSCPOG00000009552PABPC410096.197Cavia_porcellus
ENSMLUG00000012068PABPC410096.513ENSCCAG00000037306PABPC410096.513Cebus_capucinus
ENSMLUG00000012068PABPC410096.672ENSCATG00000042164PABPC410096.672Cercocebus_atys
ENSMLUG00000012068PABPC410096.197ENSCLAG00000011899PABPC410096.197Chinchilla_lanigera
ENSMLUG00000012068PABPC410092.424ENSCSAG00000001135PABPC410092.424Chlorocebus_sabaeus
ENSMLUG00000012068PABPC48997.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSMLUG00000012068PABPC49990.159ENSCPBG00000001038PABPC410090.159Chrysemys_picta_bellii
ENSMLUG00000012068PABPC49996.463ENSCANG00000034177PABPC410096.463Colobus_angolensis_palliatus
ENSMLUG00000012068PABPC410097.245ENSCGRG00001018166Pabpc49997.245Cricetulus_griseus_chok1gshd
ENSMLUG00000012068PABPC49997.204ENSCGRG00000009777Pabpc49997.204Cricetulus_griseus_crigri
ENSMLUG00000012068PABPC410083.599ENSCSEG00000000130pabpc410084.395Cynoglossus_semilaevis
ENSMLUG00000012068PABPC49984.441ENSCVAG00000019246pabpc410085.089Cyprinodon_variegatus
ENSMLUG00000012068PABPC49984.102ENSDARG00000059259pabpc410084.653Danio_rerio
ENSMLUG00000012068PABPC49996.429ENSDNOG00000018444-10096.429Dasypus_novemcinctus
ENSMLUG00000012068PABPC410094.410ENSDORG00000011581Pabpc410094.410Dipodomys_ordii
ENSMLUG00000012068PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSMLUG00000012068PABPC48563.333ENSETEG00000009172-9963.187Echinops_telfairi
ENSMLUG00000012068PABPC49776.423ENSEBUG00000013782pabpc49975.758Eptatretus_burgeri
ENSMLUG00000012068PABPC49977.492ENSEBUG00000000992pabpc49977.010Eptatretus_burgeri
ENSMLUG00000012068PABPC410092.576ENSEASG00005014119PABPC410092.576Equus_asinus_asinus
ENSMLUG00000012068PABPC410092.576ENSECAG00000009396PABPC410092.576Equus_caballus
ENSMLUG00000012068PABPC410089.091ENSEEUG00000002962PABPC410089.091Erinaceus_europaeus
ENSMLUG00000012068PABPC49982.428ENSELUG00000003195pabpc49882.857Esox_lucius
ENSMLUG00000012068PABPC410096.830ENSFCAG00000015254-10096.830Felis_catus
ENSMLUG00000012068PABPC49989.348ENSFALG00000000543PABPC410089.348Ficedula_albicollis
ENSMLUG00000012068PABPC48962.260ENSFDAG00000010581-10059.170Fukomys_damarensis
ENSMLUG00000012068PABPC410092.273ENSFDAG00000020016-10092.273Fukomys_damarensis
ENSMLUG00000012068PABPC410084.370ENSFHEG00000007548pabpc410085.008Fundulus_heteroclitus
ENSMLUG00000012068PABPC410082.104ENSGMOG00000019025pabpc410082.732Gadus_morhua
ENSMLUG00000012068PABPC49990.000ENSGALG00000003800PABPC410090.000Gallus_gallus
ENSMLUG00000012068PABPC410083.413ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSMLUG00000012068PABPC410082.803ENSGACG00000007179pabpc410083.439Gasterosteus_aculeatus
ENSMLUG00000012068PABPC49989.841ENSGAGG00000001888PABPC410089.841Gopherus_agassizii
ENSMLUG00000012068PABPC410096.672ENSGGOG00000004002PABPC410096.672Gorilla_gorilla
ENSMLUG00000012068PABPC410084.236ENSHBUG00000020206pabpc410084.873Haplochromis_burtoni
ENSMLUG00000012068PABPC410096.672ENSHGLG00000011162PABPC410096.672Heterocephalus_glaber_female
ENSMLUG00000012068PABPC410096.672ENSHGLG00100001580PABPC410096.672Heterocephalus_glaber_male
ENSMLUG00000012068PABPC410083.573ENSHCOG00000012694pabpc410084.211Hippocampus_comes
ENSMLUG00000012068PABPC49882.287ENSIPUG00000016620pabpc49982.177Ictalurus_punctatus
ENSMLUG00000012068PABPC410099.024ENSSTOG00000010416PABPC410099.024Ictidomys_tridecemlineatus
ENSMLUG00000012068PABPC410091.925ENSJJAG00000007781Pabpc410091.925Jaculus_jaculus
ENSMLUG00000012068PABPC49984.591ENSKMAG00000013597pabpc49985.233Kryptolebias_marmoratus
ENSMLUG00000012068PABPC410083.810ENSLBEG00000013654pabpc410083.492Labrus_bergylta
ENSMLUG00000012068PABPC49986.909ENSLACG00000011907PABPC410086.909Latimeria_chalumnae
ENSMLUG00000012068PABPC49984.676ENSLOCG00000001877pabpc49985.466Lepisosteus_oculatus
ENSMLUG00000012068PABPC410099.187ENSLAFG00000000151PABPC410099.187Loxodonta_africana
ENSMLUG00000012068PABPC410096.672ENSMFAG00000041481PABPC410096.672Macaca_fascicularis
ENSMLUG00000012068PABPC410092.424ENSMMUG00000007497PABPC410092.424Macaca_mulatta
ENSMLUG00000012068PABPC410096.513ENSMNEG00000043054PABPC410096.513Macaca_nemestrina
ENSMLUG00000012068PABPC410096.672ENSMLEG00000040716PABPC410096.672Mandrillus_leucophaeus
ENSMLUG00000012068PABPC49984.330ENSMAMG00000010025pabpc49984.615Mastacembelus_armatus
ENSMLUG00000012068PABPC410083.917ENSMZEG00005006141pabpc410084.554Maylandia_zebra
ENSMLUG00000012068PABPC49986.542ENSMGAG00000005408PABPC410086.542Meleagris_gallopavo
ENSMLUG00000012068PABPC47997.030ENSMAUG00000019763-8593.750Mesocricetus_auratus
ENSMLUG00000012068PABPC47489.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSMLUG00000012068PABPC45981.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSMLUG00000012068PABPC49985.558ENSMICG00000036729-10085.558Microcebus_murinus
ENSMLUG00000012068PABPC48899.084ENSMICG00000016633-10099.084Microcebus_murinus
ENSMLUG00000012068PABPC410095.246ENSMOCG00000006763Pabpc49995.246Microtus_ochrogaster
ENSMLUG00000012068PABPC410082.315ENSMMOG00000002363pabpc410080.945Mola_mola
ENSMLUG00000012068PABPC49886.491ENSMODG00000017657-10086.128Monodelphis_domestica
ENSMLUG00000012068PABPC46073.729ENSMODG00000018051-9173.729Monodelphis_domestica
ENSMLUG00000012068PABPC49984.058ENSMALG00000011017pabpc410084.286Monopterus_albus
ENSMLUG00000012068PABPC49982.801MGP_CAROLIEiJ_G0024864-10082.801Mus_caroli
ENSMLUG00000012068PABPC410090.909MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSMLUG00000012068PABPC410098.049ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSMLUG00000012068PABPC49990.937MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSMLUG00000012068PABPC49974.425MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSMLUG00000012068PABPC410092.576ENSMPUG00000014414-10092.576Mustela_putorius_furo
ENSMLUG00000012068PABPC49551.987ENSMPUG00000006836-10051.591Mustela_putorius_furo
ENSMLUG00000012068PABPC410098.862ENSNGAG00000018292Pabpc410098.862Nannospalax_galili
ENSMLUG00000012068PABPC46192.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSMLUG00000012068PABPC46986.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSMLUG00000012068PABPC410096.672ENSNLEG00000011928PABPC410096.672Nomascus_leucogenys
ENSMLUG00000012068PABPC48799.147ENSOPRG00000011984PABPC48699.147Ochotona_princeps
ENSMLUG00000012068PABPC410095.880ENSODEG00000006592-10095.880Octodon_degus
ENSMLUG00000012068PABPC45485.714ENSODEG00000013457-10085.714Octodon_degus
ENSMLUG00000012068PABPC49985.232ENSODEG00000017434-10084.599Octodon_degus
ENSMLUG00000012068PABPC410084.236ENSONIG00000008176pabpc410084.873Oreochromis_niloticus
ENSMLUG00000012068PABPC49989.365ENSOANG00000010001PABPC410089.365Ornithorhynchus_anatinus
ENSMLUG00000012068PABPC49591.930ENSOCUG00000000562PABPC48891.930Oryctolagus_cuniculus
ENSMLUG00000012068PABPC49990.741ENSORLG00000017479pabpc49990.741Oryzias_latipes
ENSMLUG00000012068PABPC49990.741ENSORLG00020018644pabpc49990.741Oryzias_latipes_hni
ENSMLUG00000012068PABPC49990.741ENSORLG00015015042pabpc49990.741Oryzias_latipes_hsok
ENSMLUG00000012068PABPC49984.740ENSOMEG00000014410pabpc49984.776Oryzias_melastigma
ENSMLUG00000012068PABPC410094.436ENSOGAG00000004067PABPC410094.436Otolemur_garnettii
ENSMLUG00000012068PABPC410092.273ENSOARG00000020060PABPC410092.273Ovis_aries
ENSMLUG00000012068PABPC410096.672ENSPPAG00000043625PABPC410096.672Pan_paniscus
ENSMLUG00000012068PABPC410096.830ENSPPRG00000024727PABPC410096.830Panthera_pardus
ENSMLUG00000012068PABPC410096.830ENSPTIG00000005829PABPC410096.830Panthera_tigris_altaica
ENSMLUG00000012068PABPC410096.672ENSPTRG00000000573PABPC410096.672Pan_troglodytes
ENSMLUG00000012068PABPC410096.830ENSPANG00000009484PABPC410096.830Papio_anubis
ENSMLUG00000012068PABPC49983.968ENSPKIG00000025356pabpc49984.603Paramormyrops_kingsleyae
ENSMLUG00000012068PABPC49990.000ENSPSIG00000016892PABPC410090.000Pelodiscus_sinensis
ENSMLUG00000012068PABPC410083.683ENSPMGG00000009073pabpc49982.581Periophthalmus_magnuspinnatus
ENSMLUG00000012068PABPC410094.929ENSPEMG00000023569-9994.929Peromyscus_maniculatus_bairdii
ENSMLUG00000012068PABPC410090.394ENSPEMG00000024193-9990.394Peromyscus_maniculatus_bairdii
ENSMLUG00000012068PABPC49572.899ENSPMAG00000007885pabpc49972.597Petromyzon_marinus
ENSMLUG00000012068PABPC48873.124ENSPMAG00000002836pabpc410073.427Petromyzon_marinus
ENSMLUG00000012068PABPC49890.453ENSPCIG00000020674PABPC410090.000Phascolarctos_cinereus
ENSMLUG00000012068PABPC410084.051ENSPFOG00000002682pabpc410085.008Poecilia_formosa
ENSMLUG00000012068PABPC410083.892ENSPLAG00000010112pabpc410084.848Poecilia_latipinna
ENSMLUG00000012068PABPC49984.441ENSPMEG00000019739pabpc410085.008Poecilia_mexicana
ENSMLUG00000012068PABPC410084.051ENSPREG00000001589pabpc410084.689Poecilia_reticulata
ENSMLUG00000012068PABPC410092.424ENSPPYG00000001506PABPC410092.424Pongo_abelii
ENSMLUG00000012068PABPC410087.576ENSPCAG00000003341PABPC410087.576Procavia_capensis
ENSMLUG00000012068PABPC49976.937ENSPCOG00000025882-9593.069Propithecus_coquereli
ENSMLUG00000012068PABPC410096.677ENSPCOG00000023725-10096.677Propithecus_coquereli
ENSMLUG00000012068PABPC49991.261ENSPVAG00000002187PABPC410091.261Pteropus_vampyrus
ENSMLUG00000012068PABPC410084.076ENSPNYG00000006134pabpc410084.713Pundamilia_nyererei
ENSMLUG00000012068PABPC410083.861ENSPNAG00000024355pabpc410084.494Pygocentrus_nattereri
ENSMLUG00000012068PABPC410093.634ENSRNOG00000015642Pabpc410093.634Rattus_norvegicus
ENSMLUG00000012068PABPC410091.460ENSRNOG00000028592AABR07035074.110091.460Rattus_norvegicus
ENSMLUG00000012068PABPC410096.672ENSRBIG00000039761PABPC410096.672Rhinopithecus_bieti
ENSMLUG00000012068PABPC410096.672ENSRROG00000033355PABPC410096.672Rhinopithecus_roxellana
ENSMLUG00000012068PABPC410096.672ENSSBOG00000026193PABPC410096.672Saimiri_boliviensis_boliviensis
ENSMLUG00000012068PABPC49890.291ENSSHAG00000018139PABPC410089.841Sarcophilus_harrisii
ENSMLUG00000012068PABPC49984.843ENSSFOG00015023514pabpc49984.843Scleropages_formosus
ENSMLUG00000012068PABPC49983.871ENSSMAG00000009007pabpc49984.516Scophthalmus_maximus
ENSMLUG00000012068PABPC49984.006ENSSDUG00000012683pabpc410084.236Seriola_dumerili
ENSMLUG00000012068PABPC49984.006ENSSLDG00000013025pabpc410084.236Seriola_lalandi_dorsalis
ENSMLUG00000012068PABPC410084.848ENSSARG00000000310PABPC410084.848Sorex_araneus
ENSMLUG00000012068PABPC49990.545ENSSPUG00000003204PABPC410090.545Sphenodon_punctatus
ENSMLUG00000012068PABPC49984.491ENSSPAG00000009252pabpc410084.873Stegastes_partitus
ENSMLUG00000012068PABPC48850.624ENSSSCG00000036170-9650.638Sus_scrofa
ENSMLUG00000012068PABPC410096.672ENSSSCG00000003660-10096.672Sus_scrofa
ENSMLUG00000012068PABPC49983.788ENSTGUG00000001266PABPC410085.000Taeniopygia_guttata
ENSMLUG00000012068PABPC410083.333ENSTRUG00000005907pabpc49983.974Takifugu_rubripes
ENSMLUG00000012068PABPC410079.677ENSTNIG00000016902pabpc49979.677Tetraodon_nigroviridis
ENSMLUG00000012068PABPC49981.176ENSTBEG00000009035PABPC410081.176Tupaia_belangeri
ENSMLUG00000012068PABPC49974.904ENSTTRG00000014340PABPC410079.664Tursiops_truncatus
ENSMLUG00000012068PABPC410096.672ENSUAMG00000000303PABPC410096.672Ursus_americanus
ENSMLUG00000012068PABPC49996.250ENSUMAG00000019585PABPC410098.113Ursus_maritimus
ENSMLUG00000012068PABPC48392.857ENSVPAG00000010041PABPC47792.857Vicugna_pacos
ENSMLUG00000012068PABPC410096.830ENSVVUG00000005215PABPC410096.830Vulpes_vulpes
ENSMLUG00000012068PABPC49981.876ENSXETG00000010946pabpc410081.876Xenopus_tropicalis
ENSMLUG00000012068PABPC46397.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSMLUG00000012068PABPC49983.094ENSXCOG00000013190pabpc49689.623Xiphophorus_couchianus
ENSMLUG00000012068PABPC410084.051ENSXMAG00000019007pabpc410084.689Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us