EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000012161 (Gene tree)
Gene ID: 102418055
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 51843 bases
Position: chrGL429931:2552073-2603915
Accession: 102418055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000011086	DUF1604	PF07713.13	8.5e-36	1	1
ENSMLUP00000011086	G-patch	PF01585.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000012168	GPATCH1-201	2784	XM_006095984	ENSMLUP00000011086	927 (aa)	XP_006096046	G1PJZ0

Gene Model

Click here to download ENSMLUG00000012161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000012161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000012161	GPATCH1	100	88.197	ENSG00000076650	GPATCH1	100	88.197	Homo_sapiens
ENSMLUG00000012161	GPATCH1	100	90.665	ENSAMEG00000015575	GPATCH1	100	88.841	Ailuropoda_melanoleuca
ENSMLUG00000012161	GPATCH1	82	68.508	ENSAOCG00000006668	gpatch1	77	68.508	Amphiprion_ocellaris
ENSMLUG00000012161	GPATCH1	82	53.728	ENSAPEG00000000026	gpatch1	90	51.386	Amphiprion_percula
ENSMLUG00000012161	GPATCH1	90	49.716	ENSATEG00000014494	gpatch1	90	51.305	Anabas_testudineus
ENSMLUG00000012161	GPATCH1	91	60.826	ENSAPLG00000007584	GPATCH1	99	59.825	Anas_platyrhynchos
ENSMLUG00000012161	GPATCH1	100	87.768	ENSANAG00000027002	GPATCH1	100	87.768	Aotus_nancymaae
ENSMLUG00000012161	GPATCH1	82	53.817	ENSACLG00000024740	gpatch1	81	53.218	Astatotilapia_calliptera
ENSMLUG00000012161	GPATCH1	91	51.634	ENSAMXG00000020177	gpatch1	97	50.925	Astyanax_mexicanus
ENSMLUG00000012161	GPATCH1	91	89.399	ENSBTAG00000000721	GPATCH1	100	89.581	Bos_taurus
ENSMLUG00000012161	GPATCH1	70	30.556	WBGene00011109	R07E5.1	71	30.511	Caenorhabditis_elegans
ENSMLUG00000012161	GPATCH1	100	86.803	ENSCJAG00000000684	GPATCH1	100	86.803	Callithrix_jacchus
ENSMLUG00000012161	GPATCH1	100	89.389	ENSCAFG00000007457	GPATCH1	84	85.959	Canis_familiaris
ENSMLUG00000012161	GPATCH1	94	89.474	ENSCAFG00020019731	GPATCH1	91	89.424	Canis_lupus_dingo
ENSMLUG00000012161	GPATCH1	99	89.332	ENSCHIG00000019626	GPATCH1	100	89.581	Capra_hircus
ENSMLUG00000012161	GPATCH1	97	78.942	ENSCAPG00000008827	GPATCH1	100	79.493	Cavia_aperea
ENSMLUG00000012161	GPATCH1	100	81.390	ENSCPOG00000024477	GPATCH1	100	82.139	Cavia_porcellus
ENSMLUG00000012161	GPATCH1	100	87.124	ENSCCAG00000024676	GPATCH1	100	87.232	Cebus_capucinus
ENSMLUG00000012161	GPATCH1	100	87.983	ENSCATG00000043637	GPATCH1	100	87.983	Cercocebus_atys
ENSMLUG00000012161	GPATCH1	96	82.790	ENSCLAG00000003395	-	92	83.231	Chinchilla_lanigera
ENSMLUG00000012161	GPATCH1	100	85.638	ENSCSAG00000004743	GPATCH1	100	85.622	Chlorocebus_sabaeus
ENSMLUG00000012161	GPATCH1	83	79.637	ENSCHOG00000012865	GPATCH1	89	79.637	Choloepus_hoffmanni
ENSMLUG00000012161	GPATCH1	79	69.631	ENSCPBG00000000666	GPATCH1	92	69.631	Chrysemys_picta_bellii
ENSMLUG00000012161	GPATCH1	82	33.770	ENSCING00000012518	-	86	34.307	Ciona_intestinalis
ENSMLUG00000012161	GPATCH1	90	85.679	ENSCANG00000012540	GPATCH1	100	85.679	Colobus_angolensis_palliatus
ENSMLUG00000012161	GPATCH1	97	80.088	ENSCGRG00001016736	Gpatch1	100	80.968	Cricetulus_griseus_chok1gshd
ENSMLUG00000012161	GPATCH1	89	66.627	ENSCGRG00000005069	Gpatch1	91	66.627	Cricetulus_griseus_crigri
ENSMLUG00000012161	GPATCH1	81	48.548	ENSCSEG00000019456	-	84	61.468	Cynoglossus_semilaevis
ENSMLUG00000012161	GPATCH1	90	50.662	ENSDARG00000033418	gpatch1	92	51.435	Danio_rerio
ENSMLUG00000012161	GPATCH1	91	86.604	ENSDNOG00000005291	GPATCH1	95	86.604	Dasypus_novemcinctus
ENSMLUG00000012161	GPATCH1	94	78.351	ENSDORG00000012546	Gpatch1	95	78.496	Dipodomys_ordii
ENSMLUG00000012161	GPATCH1	99	76.139	ENSETEG00000003626	GPATCH1	92	76.733	Echinops_telfairi
ENSMLUG00000012161	GPATCH1	94	36.916	ENSEBUG00000011286	gpatch1	91	37.810	Eptatretus_burgeri
ENSMLUG00000012161	GPATCH1	91	88.033	ENSEASG00005021162	GPATCH1	93	89.041	Equus_asinus_asinus
ENSMLUG00000012161	GPATCH1	94	89.233	ENSECAG00000022743	GPATCH1	88	89.059	Equus_caballus
ENSMLUG00000012161	GPATCH1	78	80.392	ENSEEUG00000012925	GPATCH1	76	80.392	Erinaceus_europaeus
ENSMLUG00000012161	GPATCH1	99	48.099	ENSELUG00000018195	gpatch1	90	50.168	Esox_lucius
ENSMLUG00000012161	GPATCH1	100	88.090	ENSFCAG00000014917	GPATCH1	100	87.876	Felis_catus
ENSMLUG00000012161	GPATCH1	99	63.512	ENSFALG00000007821	GPATCH1	89	64.630	Ficedula_albicollis
ENSMLUG00000012161	GPATCH1	96	82.294	ENSFDAG00000003871	GPATCH1	92	82.424	Fukomys_damarensis
ENSMLUG00000012161	GPATCH1	75	51.095	ENSGMOG00000003830	gpatch1	95	50.116	Gadus_morhua
ENSMLUG00000012161	GPATCH1	93	63.936	ENSGALG00000004839	GPATCH1	93	65.366	Gallus_gallus
ENSMLUG00000012161	GPATCH1	91	48.843	ENSGACG00000017544	gpatch1	94	48.958	Gasterosteus_aculeatus
ENSMLUG00000012161	GPATCH1	100	65.158	ENSGAGG00000010067	GPATCH1	100	64.271	Gopherus_agassizii
ENSMLUG00000012161	GPATCH1	98	87.118	ENSGGOG00000010862	GPATCH1	100	87.762	Gorilla_gorilla
ENSMLUG00000012161	GPATCH1	82	54.151	ENSHBUG00000023462	gpatch1	90	51.708	Haplochromis_burtoni
ENSMLUG00000012161	GPATCH1	100	83.191	ENSHGLG00000009334	GPATCH1	100	83.833	Heterocephalus_glaber_female
ENSMLUG00000012161	GPATCH1	100	83.298	ENSHGLG00100018074	GPATCH1	100	83.940	Heterocephalus_glaber_male
ENSMLUG00000012161	GPATCH1	93	50.825	ENSIPUG00000014977	gpatch1	90	51.995	Ictalurus_punctatus
ENSMLUG00000012161	GPATCH1	100	86.495	ENSSTOG00000003720	GPATCH1	100	85.959	Ictidomys_tridecemlineatus
ENSMLUG00000012161	GPATCH1	91	83.373	ENSJJAG00000023765	Gpatch1	100	83.208	Jaculus_jaculus
ENSMLUG00000012161	GPATCH1	90	51.748	ENSKMAG00000017950	gpatch1	89	51.455	Kryptolebias_marmoratus
ENSMLUG00000012161	GPATCH1	82	51.066	ENSLBEG00000026527	gpatch1	88	49.775	Labrus_bergylta
ENSMLUG00000012161	GPATCH1	88	58.873	ENSLACG00000008130	GPATCH1	90	59.184	Latimeria_chalumnae
ENSMLUG00000012161	GPATCH1	99	52.151	ENSLOCG00000001800	gpatch1	90	54.879	Lepisosteus_oculatus
ENSMLUG00000012161	GPATCH1	99	87.704	ENSLAFG00000013589	GPATCH1	100	86.052	Loxodonta_africana
ENSMLUG00000012161	GPATCH1	91	87.131	ENSMFAG00000034418	GPATCH1	96	87.131	Macaca_fascicularis
ENSMLUG00000012161	GPATCH1	100	87.674	ENSMMUG00000011790	GPATCH1	100	87.674	Macaca_mulatta
ENSMLUG00000012161	GPATCH1	100	87.339	ENSMNEG00000045084	GPATCH1	100	87.339	Macaca_nemestrina
ENSMLUG00000012161	GPATCH1	100	77.039	ENSMLEG00000043840	GPATCH1	100	77.146	Mandrillus_leucophaeus
ENSMLUG00000012161	GPATCH1	82	53.817	ENSMZEG00005001926	gpatch1	82	53.094	Maylandia_zebra
ENSMLUG00000012161	GPATCH1	91	64.277	ENSMGAG00000005775	GPATCH1	89	64.558	Meleagris_gallopavo
ENSMLUG00000012161	GPATCH1	90	77.712	ENSMICG00000004829	GPATCH1	93	78.420	Microcebus_murinus
ENSMLUG00000012161	GPATCH1	99	80.927	ENSMOCG00000000174	Gpatch1	92	81.733	Microtus_ochrogaster
ENSMLUG00000012161	GPATCH1	81	50.317	ENSMMOG00000002140	gpatch1	87	50.948	Mola_mola
ENSMLUG00000012161	GPATCH1	100	70.308	ENSMODG00000012226	GPATCH1	100	70.308	Monodelphis_domestica
ENSMLUG00000012161	GPATCH1	99	47.477	ENSMALG00000014386	gpatch1	90	49.432	Monopterus_albus
ENSMLUG00000012161	GPATCH1	100	83.029	ENSMUSG00000063808	Gpatch1	100	92.857	Mus_musculus
ENSMLUG00000012161	GPATCH1	100	82.422	MGP_PahariEiJ_G0012816	Gpatch1	100	93.878	Mus_pahari
ENSMLUG00000012161	GPATCH1	100	82.208	MGP_SPRETEiJ_G0030681	Gpatch1	100	93.878	Mus_spretus
ENSMLUG00000012161	GPATCH1	100	88.305	ENSMPUG00000007658	GPATCH1	100	88.305	Mustela_putorius_furo
ENSMLUG00000012161	GPATCH1	100	83.548	ENSNGAG00000012455	Gpatch1	100	83.548	Nannospalax_galili
ENSMLUG00000012161	GPATCH1	100	88.197	ENSNLEG00000007659	GPATCH1	100	88.197	Nomascus_leucogenys
ENSMLUG00000012161	GPATCH1	79	67.166	ENSMEUG00000015174	GPATCH1	79	67.166	Notamacropus_eugenii
ENSMLUG00000012161	GPATCH1	99	80.707	ENSODEG00000007103	GPATCH1	99	81.458	Octodon_degus
ENSMLUG00000012161	GPATCH1	82	54.499	ENSONIG00000003302	gpatch1	91	53.154	Oreochromis_niloticus
ENSMLUG00000012161	GPATCH1	99	69.925	ENSOANG00000012732	GPATCH1	99	68.716	Ornithorhynchus_anatinus
ENSMLUG00000012161	GPATCH1	100	86.159	ENSOCUG00000015905	GPATCH1	100	86.588	Oryctolagus_cuniculus
ENSMLUG00000012161	GPATCH1	90	50.760	ENSORLG00000018706	gpatch1	88	50.526	Oryzias_latipes
ENSMLUG00000012161	GPATCH1	90	48.252	ENSOMEG00000022688	gpatch1	90	50.349	Oryzias_melastigma
ENSMLUG00000012161	GPATCH1	85	87.358	ENSOGAG00000004016	GPATCH1	100	87.358	Otolemur_garnettii
ENSMLUG00000012161	GPATCH1	98	89.243	ENSOARG00000004365	GPATCH1	99	89.286	Ovis_aries
ENSMLUG00000012161	GPATCH1	100	87.768	ENSPPAG00000020990	GPATCH1	100	87.768	Pan_paniscus
ENSMLUG00000012161	GPATCH1	100	89.056	ENSPPRG00000017245	GPATCH1	100	88.090	Panthera_pardus
ENSMLUG00000012161	GPATCH1	100	85.622	ENSPTIG00000019649	GPATCH1	100	88.841	Panthera_tigris_altaica
ENSMLUG00000012161	GPATCH1	100	87.768	ENSPTRG00000010803	GPATCH1	100	87.768	Pan_troglodytes
ENSMLUG00000012161	GPATCH1	91	87.544	ENSPANG00000012374	GPATCH1	96	87.544	Papio_anubis
ENSMLUG00000012161	GPATCH1	81	56.633	ENSPKIG00000020745	gpatch1	82	55.263	Paramormyrops_kingsleyae
ENSMLUG00000012161	GPATCH1	100	62.142	ENSPSIG00000013433	GPATCH1	100	62.606	Pelodiscus_sinensis
ENSMLUG00000012161	GPATCH1	100	81.935	ENSPEMG00000000636	Gpatch1	100	78.495	Peromyscus_maniculatus_bairdii
ENSMLUG00000012161	GPATCH1	91	74.883	ENSPCIG00000021003	GPATCH1	95	75.000	Phascolarctos_cinereus
ENSMLUG00000012161	GPATCH1	74	49.067	ENSPREG00000008264	gpatch1	97	44.948	Poecilia_reticulata
ENSMLUG00000012161	GPATCH1	100	85.300	ENSPPYG00000009824	GPATCH1	100	85.300	Pongo_abelii
ENSMLUG00000012161	GPATCH1	83	79.384	ENSPCAG00000005931	GPATCH1	91	78.884	Procavia_capensis
ENSMLUG00000012161	GPATCH1	93	81.272	ENSPCOG00000009674	GPATCH1	97	82.562	Propithecus_coquereli
ENSMLUG00000012161	GPATCH1	84	88.798	ENSPVAG00000017767	GPATCH1	92	88.798	Pteropus_vampyrus
ENSMLUG00000012161	GPATCH1	82	54.231	ENSPNYG00000018189	gpatch1	91	53.616	Pundamilia_nyererei
ENSMLUG00000012161	GPATCH1	91	51.652	ENSPNAG00000013187	gpatch1	90	52.067	Pygocentrus_nattereri
ENSMLUG00000012161	GPATCH1	100	79.484	ENSRNOG00000011584	Gpatch1	100	82.492	Rattus_norvegicus
ENSMLUG00000012161	GPATCH1	100	80.279	ENSRBIG00000034723	GPATCH1	100	79.528	Rhinopithecus_bieti
ENSMLUG00000012161	GPATCH1	100	87.876	ENSRROG00000024428	GPATCH1	100	87.876	Rhinopithecus_roxellana
ENSMLUG00000012161	GPATCH1	100	85.622	ENSSBOG00000034650	GPATCH1	100	87.446	Saimiri_boliviensis_boliviensis
ENSMLUG00000012161	GPATCH1	99	73.712	ENSSHAG00000016016	GPATCH1	99	73.927	Sarcophilus_harrisii
ENSMLUG00000012161	GPATCH1	82	55.019	ENSSFOG00015011535	gpatch1	89	53.179	Scleropages_formosus
ENSMLUG00000012161	GPATCH1	99	45.882	ENSSMAG00000002883	gpatch1	93	48.432	Scophthalmus_maximus
ENSMLUG00000012161	GPATCH1	82	51.995	ENSSDUG00000007444	gpatch1	90	49.057	Seriola_dumerili
ENSMLUG00000012161	GPATCH1	82	51.621	ENSSLDG00000002856	gpatch1	92	51.140	Seriola_lalandi_dorsalis
ENSMLUG00000012161	GPATCH1	73	85.905	ENSSARG00000004108	GPATCH1	72	85.905	Sorex_araneus
ENSMLUG00000012161	GPATCH1	91	89.282	ENSSSCG00000002865	GPATCH1	94	89.282	Sus_scrofa
ENSMLUG00000012161	GPATCH1	99	64.332	ENSTGUG00000009401	GPATCH1	91	64.734	Taeniopygia_guttata
ENSMLUG00000012161	GPATCH1	82	51.305	ENSTRUG00000005785	-	90	49.765	Takifugu_rubripes
ENSMLUG00000012161	GPATCH1	82	51.305	ENSTRUG00000025081	gpatch1	90	49.765	Takifugu_rubripes
ENSMLUG00000012161	GPATCH1	82	52.140	ENSTNIG00000002554	gpatch1	99	52.971	Tetraodon_nigroviridis
ENSMLUG00000012161	GPATCH1	64	76.029	ENSTBEG00000007750	-	84	76.029	Tupaia_belangeri
ENSMLUG00000012161	GPATCH1	91	81.338	ENSTTRG00000012221	GPATCH1	100	77.540	Tursiops_truncatus
ENSMLUG00000012161	GPATCH1	90	90.488	ENSUMAG00000014645	GPATCH1	100	87.589	Ursus_maritimus
ENSMLUG00000012161	GPATCH1	79	96.571	ENSVPAG00000010313	GPATCH1	86	96.739	Vicugna_pacos
ENSMLUG00000012161	GPATCH1	94	89.359	ENSVVUG00000016572	GPATCH1	91	89.307	Vulpes_vulpes
ENSMLUG00000012161	GPATCH1	99	49.842	ENSXETG00000018276	gpatch1	100	51.266	Xenopus_tropicalis