EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000012809 (Gene tree)
Gene ID: 102442115
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 7770 bases
Position: chrGL430396:346872-354641
Accession: 102442115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000011665	zf-CCCH	PF00642.24	4.5e-06	1	1
ENSMLUP00000011665	TRM	PF02005.16	3.2e-149	1	1
ENSMLUP00000011665	Met_10	PF02475.16	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000012821	TRMT1-201	2016	XM_006105050	ENSMLUP00000011665	671 (aa)	XP_006105112	G1PLD6

Gene Model

Click here to download ENSMLUG00000012809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000012809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000012809	TRMT1	96	88.300	ENSG00000104907	TRMT1	100	95.288	Homo_sapiens
ENSMLUG00000012809	TRMT1	100	87.183	ENSAMEG00000012598	TRMT1	100	87.183	Ailuropoda_melanoleuca
ENSMLUG00000012809	TRMT1	92	56.825	ENSACIG00000018680	trmt1	97	56.825	Amphilophus_citrinellus
ENSMLUG00000012809	TRMT1	86	66.839	ENSAOCG00000006781	trmt1	86	66.839	Amphiprion_ocellaris
ENSMLUG00000012809	TRMT1	86	66.897	ENSAPEG00000007712	trmt1	86	66.897	Amphiprion_percula
ENSMLUG00000012809	TRMT1	87	68.205	ENSATEG00000001872	trmt1	86	68.205	Anabas_testudineus
ENSMLUG00000012809	TRMT1	87	67.802	ENSACAG00000003825	TRMT1	94	67.802	Anolis_carolinensis
ENSMLUG00000012809	TRMT1	97	83.155	ENSANAG00000023016	TRMT1	99	86.548	Aotus_nancymaae
ENSMLUG00000012809	TRMT1	91	61.563	ENSACLG00000010073	trmt1	96	61.563	Astatotilapia_calliptera
ENSMLUG00000012809	TRMT1	86	68.103	ENSAMXG00000012026	trmt1	86	68.103	Astyanax_mexicanus
ENSMLUG00000012809	TRMT1	100	86.289	ENSBTAG00000019325	TRMT1	95	86.289	Bos_taurus
ENSMLUG00000012809	TRMT1	77	41.132	WBGene00006613	trm-1	94	41.132	Caenorhabditis_elegans
ENSMLUG00000012809	TRMT1	96	82.462	ENSCJAG00000004566	TRMT1	99	82.462	Callithrix_jacchus
ENSMLUG00000012809	TRMT1	99	88.889	ENSCAFG00000017070	TRMT1	100	90.267	Canis_familiaris
ENSMLUG00000012809	TRMT1	97	87.730	ENSCAFG00020005397	TRMT1	100	84.894	Canis_lupus_dingo
ENSMLUG00000012809	TRMT1	99	86.576	ENSCHIG00000013569	TRMT1	100	86.576	Capra_hircus
ENSMLUG00000012809	TRMT1	96	82.764	ENSTSYG00000003207	TRMT1	99	82.496	Carlito_syrichta
ENSMLUG00000012809	TRMT1	84	79.469	ENSCAPG00000003355	TRMT1	99	79.469	Cavia_aperea
ENSMLUG00000012809	TRMT1	98	80.974	ENSCPOG00000011754	TRMT1	99	80.974	Cavia_porcellus
ENSMLUG00000012809	TRMT1	98	80.916	ENSCCAG00000022263	TRMT1	99	85.065	Cebus_capucinus
ENSMLUG00000012809	TRMT1	82	73.150	ENSCATG00000038220	-	98	73.150	Cercocebus_atys
ENSMLUG00000012809	TRMT1	99	87.311	ENSCATG00000039850	TRMT1	100	87.311	Cercocebus_atys
ENSMLUG00000012809	TRMT1	98	84.018	ENSCLAG00000015295	TRMT1	97	84.018	Chinchilla_lanigera
ENSMLUG00000012809	TRMT1	79	88.868	ENSCSAG00000006500	TRMT1	100	88.868	Chlorocebus_sabaeus
ENSMLUG00000012809	TRMT1	93	65.635	ENSCPBG00000023866	TRMT1	94	66.254	Chrysemys_picta_bellii
ENSMLUG00000012809	TRMT1	82	45.961	ENSCING00000002884	-	98	45.961	Ciona_intestinalis
ENSMLUG00000012809	TRMT1	82	46.209	ENSCSAVG00000010927	-	100	46.026	Ciona_savignyi
ENSMLUG00000012809	TRMT1	90	68.709	ENSCANG00000031650	-	96	68.277	Colobus_angolensis_palliatus
ENSMLUG00000012809	TRMT1	97	71.560	ENSCANG00000040631	TRMT1	99	71.560	Colobus_angolensis_palliatus
ENSMLUG00000012809	TRMT1	99	81.832	ENSCGRG00001022594	Trmt1	100	81.832	Cricetulus_griseus_chok1gshd
ENSMLUG00000012809	TRMT1	99	81.832	ENSCGRG00000017732	Trmt1	100	81.832	Cricetulus_griseus_crigri
ENSMLUG00000012809	TRMT1	86	67.188	ENSCSEG00000001643	trmt1	84	69.246	Cynoglossus_semilaevis
ENSMLUG00000012809	TRMT1	85	67.888	ENSCVAG00000011886	trmt1	86	67.888	Cyprinodon_variegatus
ENSMLUG00000012809	TRMT1	85	66.381	ENSDARG00000010978	trmt1	85	66.381	Danio_rerio
ENSMLUG00000012809	TRMT1	83	63.214	ENSDNOG00000048240	-	95	63.214	Dasypus_novemcinctus
ENSMLUG00000012809	TRMT1	98	81.763	ENSDORG00000014298	Trmt1	99	81.763	Dipodomys_ordii
ENSMLUG00000012809	TRMT1	77	49.136	FBgn0032430	CG6388	87	49.136	Drosophila_melanogaster
ENSMLUG00000012809	TRMT1	54	80.690	ENSETEG00000015483	-	55	80.690	Echinops_telfairi
ENSMLUG00000012809	TRMT1	77	53.965	ENSEBUG00000003449	trmt1	76	53.817	Eptatretus_burgeri
ENSMLUG00000012809	TRMT1	93	89.085	ENSEASG00005004050	TRMT1	100	88.697	Equus_asinus_asinus
ENSMLUG00000012809	TRMT1	93	89.406	ENSECAG00000016149	TRMT1	100	89.011	Equus_caballus
ENSMLUG00000012809	TRMT1	59	71.537	ENSEEUG00000014102	-	100	71.537	Erinaceus_europaeus
ENSMLUG00000012809	TRMT1	90	64.098	ENSELUG00000021659	trmt1	89	64.098	Esox_lucius
ENSMLUG00000012809	TRMT1	98	87.690	ENSFCAG00000000483	TRMT1	99	87.690	Felis_catus
ENSMLUG00000012809	TRMT1	99	82.628	ENSFDAG00000007386	TRMT1	99	82.628	Fukomys_damarensis
ENSMLUG00000012809	TRMT1	87	64.358	ENSFHEG00000012865	trmt1	91	68.007	Fundulus_heteroclitus
ENSMLUG00000012809	TRMT1	86	61.458	ENSGMOG00000006564	trmt1	99	61.592	Gadus_morhua
ENSMLUG00000012809	TRMT1	86	68.403	ENSGAFG00000011862	trmt1	89	68.348	Gambusia_affinis
ENSMLUG00000012809	TRMT1	89	62.938	ENSGACG00000000227	trmt1	95	63.333	Gasterosteus_aculeatus
ENSMLUG00000012809	TRMT1	91	68.026	ENSGAGG00000016432	TRMT1	89	68.026	Gopherus_agassizii
ENSMLUG00000012809	TRMT1	96	88.456	ENSGGOG00000014007	TRMT1	99	87.939	Gorilla_gorilla
ENSMLUG00000012809	TRMT1	85	58.451	ENSHBUG00000008821	trmt1	93	58.451	Haplochromis_burtoni
ENSMLUG00000012809	TRMT1	98	83.131	ENSHGLG00000015972	TRMT1	99	83.131	Heterocephalus_glaber_female
ENSMLUG00000012809	TRMT1	98	77.086	ENSHGLG00100018112	TRMT1	99	77.086	Heterocephalus_glaber_male
ENSMLUG00000012809	TRMT1	94	60.809	ENSHCOG00000009447	trmt1	98	60.809	Hippocampus_comes
ENSMLUG00000012809	TRMT1	92	60.806	ENSIPUG00000002899	trmt1	86	65.776	Ictalurus_punctatus
ENSMLUG00000012809	TRMT1	99	85.520	ENSSTOG00000012531	TRMT1	100	85.520	Ictidomys_tridecemlineatus
ENSMLUG00000012809	TRMT1	93	82.643	ENSJJAG00000017154	Trmt1	100	80.422	Jaculus_jaculus
ENSMLUG00000012809	TRMT1	88	66.779	ENSKMAG00000011809	trmt1	95	67.304	Kryptolebias_marmoratus
ENSMLUG00000012809	TRMT1	89	65.404	ENSLBEG00000012703	trmt1	89	65.404	Labrus_bergylta
ENSMLUG00000012809	TRMT1	85	58.435	ENSLACG00000014585	TRMT1	99	56.979	Latimeria_chalumnae
ENSMLUG00000012809	TRMT1	72	70.393	ENSLOCG00000006479	trmt1	97	62.887	Lepisosteus_oculatus
ENSMLUG00000012809	TRMT1	98	84.825	ENSLAFG00000014072	TRMT1	100	84.825	Loxodonta_africana
ENSMLUG00000012809	TRMT1	99	87.462	ENSMFAG00000033143	TRMT1	100	87.462	Macaca_fascicularis
ENSMLUG00000012809	TRMT1	98	80.974	ENSMMUG00000001167	TRMT1	100	80.974	Macaca_mulatta
ENSMLUG00000012809	TRMT1	99	87.311	ENSMNEG00000037867	TRMT1	100	87.311	Macaca_nemestrina
ENSMLUG00000012809	TRMT1	98	86.870	ENSMLEG00000016142	TRMT1	99	86.870	Mandrillus_leucophaeus
ENSMLUG00000012809	TRMT1	85	67.888	ENSMAMG00000004357	trmt1	85	67.888	Mastacembelus_armatus
ENSMLUG00000012809	TRMT1	90	62.945	ENSMZEG00005014510	trmt1	92	62.945	Maylandia_zebra
ENSMLUG00000012809	TRMT1	97	82.308	ENSMAUG00000011134	Trmt1	100	81.504	Mesocricetus_auratus
ENSMLUG00000012809	TRMT1	99	87.915	ENSMICG00000000793	TRMT1	100	87.915	Microcebus_murinus
ENSMLUG00000012809	TRMT1	97	82.642	ENSMOCG00000015895	Trmt1	100	81.982	Microtus_ochrogaster
ENSMLUG00000012809	TRMT1	85	66.957	ENSMMOG00000011097	trmt1	92	66.957	Mola_mola
ENSMLUG00000012809	TRMT1	92	75.645	ENSMODG00000011619	TRMT1	100	75.645	Monodelphis_domestica
ENSMLUG00000012809	TRMT1	99	81.682	MGP_CAROLIEiJ_G0031304	Trmt1	100	81.682	Mus_caroli
ENSMLUG00000012809	TRMT1	99	81.832	ENSMUSG00000001909	Trmt1	100	81.832	Mus_musculus
ENSMLUG00000012809	TRMT1	99	81.982	MGP_SPRETEiJ_G0032422	Trmt1	100	81.982	Mus_spretus
ENSMLUG00000012809	TRMT1	100	87.481	ENSMPUG00000004210	TRMT1	96	87.481	Mustela_putorius_furo
ENSMLUG00000012809	TRMT1	99	81.325	ENSNGAG00000022486	Trmt1	100	81.325	Nannospalax_galili
ENSMLUG00000012809	TRMT1	74	69.254	ENSNBRG00000024376	trmt1	85	69.254	Neolamprologus_brichardi
ENSMLUG00000012809	TRMT1	77	87.845	ENSNLEG00000013019	-	99	86.154	Nomascus_leucogenys
ENSMLUG00000012809	TRMT1	88	77.066	ENSMEUG00000013756	TRMT1	99	77.066	Notamacropus_eugenii
ENSMLUG00000012809	TRMT1	77	90.544	ENSOPRG00000009471	-	79	90.544	Ochotona_princeps
ENSMLUG00000012809	TRMT1	97	83.537	ENSODEG00000010323	TRMT1	99	83.537	Octodon_degus
ENSMLUG00000012809	TRMT1	90	66.721	ENSONIG00000000400	trmt1	96	66.721	Oreochromis_niloticus
ENSMLUG00000012809	TRMT1	78	88.359	ENSOCUG00000021934	TRMT1	99	88.359	Oryctolagus_cuniculus
ENSMLUG00000012809	TRMT1	86	63.511	ENSORLG00000020074	trmt1	90	63.511	Oryzias_latipes
ENSMLUG00000012809	TRMT1	86	66.319	ENSORLG00020007561	trmt1	90	66.146	Oryzias_latipes_hni
ENSMLUG00000012809	TRMT1	86	66.319	ENSORLG00015006547	trmt1	87	66.319	Oryzias_latipes_hsok
ENSMLUG00000012809	TRMT1	91	64.169	ENSOMEG00000019343	trmt1	92	64.169	Oryzias_melastigma
ENSMLUG00000012809	TRMT1	93	84.689	ENSOGAG00000025576	TRMT1	98	84.689	Otolemur_garnettii
ENSMLUG00000012809	TRMT1	100	70.815	ENSOARG00000009397	TRMT1	95	71.111	Ovis_aries
ENSMLUG00000012809	TRMT1	97	79.692	ENSPPRG00000012117	TRMT1	100	79.692	Panthera_pardus
ENSMLUG00000012809	TRMT1	76	87.842	ENSPTIG00000008833	TRMT1	97	87.842	Panthera_tigris_altaica
ENSMLUG00000012809	TRMT1	96	88.300	ENSPTRG00000010557	TRMT1	99	87.786	Pan_troglodytes
ENSMLUG00000012809	TRMT1	94	67.353	ENSPTRG00000050421	-	96	67.353	Pan_troglodytes
ENSMLUG00000012809	TRMT1	98	87.500	ENSPANG00000009247	TRMT1	99	87.500	Papio_anubis
ENSMLUG00000012809	TRMT1	84	72.557	ENSPANG00000034058	-	96	72.557	Papio_anubis
ENSMLUG00000012809	TRMT1	87	68.601	ENSPKIG00000005309	trmt1	86	68.601	Paramormyrops_kingsleyae
ENSMLUG00000012809	TRMT1	87	59.556	ENSPSIG00000008762	TRMT1	83	59.492	Pelodiscus_sinensis
ENSMLUG00000012809	TRMT1	90	64.559	ENSPMGG00000019764	trmt1	94	64.345	Periophthalmus_magnuspinnatus
ENSMLUG00000012809	TRMT1	96	85.116	ENSPEMG00000016247	Trmt1	100	83.784	Peromyscus_maniculatus_bairdii
ENSMLUG00000012809	TRMT1	85	60.664	ENSPMAG00000004329	trmt1	89	60.664	Petromyzon_marinus
ENSMLUG00000012809	TRMT1	95	73.879	ENSPCIG00000019273	TRMT1	99	73.879	Phascolarctos_cinereus
ENSMLUG00000012809	TRMT1	93	65.258	ENSPFOG00000008527	trmt1	98	65.258	Poecilia_formosa
ENSMLUG00000012809	TRMT1	93	65.312	ENSPLAG00000018788	trmt1	99	66.895	Poecilia_latipinna
ENSMLUG00000012809	TRMT1	86	69.444	ENSPMEG00000013120	trmt1	88	69.444	Poecilia_mexicana
ENSMLUG00000012809	TRMT1	86	69.097	ENSPREG00000000211	trmt1	85	69.271	Poecilia_reticulata
ENSMLUG00000012809	TRMT1	96	88.768	ENSPPYG00000009622	TRMT1	99	88.244	Pongo_abelii
ENSMLUG00000012809	TRMT1	98	77.778	ENSPCAG00000003698	TRMT1	99	77.778	Procavia_capensis
ENSMLUG00000012809	TRMT1	97	88.055	ENSPCOG00000008653	TRMT1	99	88.055	Propithecus_coquereli
ENSMLUG00000012809	TRMT1	98	91.145	ENSPVAG00000015076	TRMT1	99	91.145	Pteropus_vampyrus
ENSMLUG00000012809	TRMT1	85	64.111	ENSPNYG00000013960	trmt1	92	64.111	Pundamilia_nyererei
ENSMLUG00000012809	TRMT1	80	69.854	ENSPNAG00000024859	trmt1	89	69.854	Pygocentrus_nattereri
ENSMLUG00000012809	TRMT1	95	82.839	ENSRNOG00000002914	Trmt1	100	82.839	Rattus_norvegicus
ENSMLUG00000012809	TRMT1	93	68.640	ENSRBIG00000037505	-	99	68.224	Rhinopithecus_bieti
ENSMLUG00000012809	TRMT1	99	87.311	ENSRBIG00000038324	TRMT1	100	87.311	Rhinopithecus_bieti
ENSMLUG00000012809	TRMT1	93	67.840	ENSRROG00000031847	-	98	67.445	Rhinopithecus_roxellana
ENSMLUG00000012809	TRMT1	99	87.160	ENSRROG00000028599	TRMT1	100	87.160	Rhinopithecus_roxellana
ENSMLUG00000012809	TRMT1	76	36.431	YDR120C	-	92	37.196	Saccharomyces_cerevisiae
ENSMLUG00000012809	TRMT1	98	81.374	ENSSBOG00000028861	TRMT1	99	85.065	Saimiri_boliviensis_boliviensis
ENSMLUG00000012809	TRMT1	87	78.535	ENSSHAG00000014381	TRMT1	99	76.461	Sarcophilus_harrisii
ENSMLUG00000012809	TRMT1	86	68.522	ENSSFOG00015004139	trmt1	88	66.225	Scleropages_formosus
ENSMLUG00000012809	TRMT1	85	67.882	ENSSMAG00000021136	trmt1	85	67.882	Scophthalmus_maximus
ENSMLUG00000012809	TRMT1	87	66.780	ENSSDUG00000012740	trmt1	86	66.780	Seriola_dumerili
ENSMLUG00000012809	TRMT1	87	66.724	ENSSLDG00000005971	trmt1	86	66.724	Seriola_lalandi_dorsalis
ENSMLUG00000012809	TRMT1	84	84.331	ENSSARG00000005138	TRMT1	100	84.331	Sorex_araneus
ENSMLUG00000012809	TRMT1	89	54.276	ENSSPUG00000001084	TRMT1	95	54.605	Sphenodon_punctatus
ENSMLUG00000012809	TRMT1	88	63.712	ENSSPAG00000007153	trmt1	98	63.712	Stegastes_partitus
ENSMLUG00000012809	TRMT1	95	89.969	ENSSSCG00000013744	TRMT1	100	89.969	Sus_scrofa
ENSMLUG00000012809	TRMT1	85	63.356	ENSTRUG00000010700	trmt1	86	63.356	Takifugu_rubripes
ENSMLUG00000012809	TRMT1	85	66.899	ENSTNIG00000018808	trmt1	98	66.899	Tetraodon_nigroviridis
ENSMLUG00000012809	TRMT1	95	86.250	ENSTTRG00000006379	TRMT1	99	85.106	Tursiops_truncatus
ENSMLUG00000012809	TRMT1	97	88.172	ENSUAMG00000022911	TRMT1	100	87.284	Ursus_americanus
ENSMLUG00000012809	TRMT1	95	88.697	ENSUMAG00000006027	TRMT1	100	88.697	Ursus_maritimus
ENSMLUG00000012809	TRMT1	99	88.822	ENSVVUG00000024177	TRMT1	100	88.822	Vulpes_vulpes
ENSMLUG00000012809	TRMT1	69	72.668	ENSXETG00000033863	TRMT1	92	72.668	Xenopus_tropicalis
ENSMLUG00000012809	TRMT1	86	68.750	ENSXCOG00000015733	trmt1	88	68.696	Xiphophorus_couchianus
ENSMLUG00000012809	TRMT1	85	68.761	ENSXMAG00000013823	trmt1	98	68.586	Xiphophorus_maculatus