EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000013097 (Gene tree)
Gene ID: 102430992
Gene Symbol: -
Alias: -
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 4971 bases
Position: chrGL430109:777017-781987
Accession: 102430992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000011915	LSM	PF01423.22	2.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000013099	-	312	XM_006101158	ENSMLUP00000011915	103 (aa)	XP_006101220	G1PM06

Gene Model

Click here to download ENSMLUG00000013097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000013097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000013097	-	69	39.437	ENSMLUG00000024983	-	83	39.437
ENSMLUG00000013097	-	100	91.262	ENSMLUG00000024002	-	94	91.262
ENSMLUG00000013097	-	72	35.526	ENSMLUG00000006837	-	73	35.526
ENSMLUG00000013097	-	69	39.437	ENSMLUG00000026490	-	83	39.437
ENSMLUG00000013097	-	69	39.437	ENSMLUG00000025938	-	83	39.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000013097	-	100	97.087	ENSG00000130332	LSM7	100	97.959	Homo_sapiens
ENSMLUG00000013097	-	92	94.737	ENSAPOG00000015573	lsm7	82	94.737	Acanthochromis_polyacanthus
ENSMLUG00000013097	-	100	98.058	ENSAMEG00000005484	LSM7	100	98.058	Ailuropoda_melanoleuca
ENSMLUG00000013097	-	94	94.845	ENSACIG00000006498	lsm7	77	94.845	Amphilophus_citrinellus
ENSMLUG00000013097	-	99	93.137	ENSAOCG00000001077	lsm7	93	93.137	Amphiprion_ocellaris
ENSMLUG00000013097	-	100	92.233	ENSAPEG00000000694	lsm7	100	92.233	Amphiprion_percula
ENSMLUG00000013097	-	100	94.175	ENSAPEG00000024447	lsm7	92	94.175	Amphiprion_percula
ENSMLUG00000013097	-	100	92.233	ENSATEG00000008557	lsm7	100	92.233	Anabas_testudineus
ENSMLUG00000013097	-	100	88.350	ENSANAG00000022222	-	100	88.350	Aotus_nancymaae
ENSMLUG00000013097	-	100	97.087	ENSANAG00000037196	-	100	97.087	Aotus_nancymaae
ENSMLUG00000013097	-	100	91.262	ENSACLG00000021021	lsm7	100	91.262	Astatotilapia_calliptera
ENSMLUG00000013097	-	100	92.233	ENSAMXG00000037622	lsm7	100	92.233	Astyanax_mexicanus
ENSMLUG00000013097	-	100	97.087	ENSBTAG00000004521	LSM7	100	97.087	Bos_taurus
ENSMLUG00000013097	-	98	57.426	WBGene00003081	lsm-7	97	57.426	Caenorhabditis_elegans
ENSMLUG00000013097	-	54	96.429	ENSCJAG00000039713	-	68	96.429	Callithrix_jacchus
ENSMLUG00000013097	-	99	98.039	ENSCAFG00000019409	LSM7	99	98.039	Canis_familiaris
ENSMLUG00000013097	-	99	98.039	ENSCAFG00020018168	LSM7	75	97.059	Canis_lupus_dingo
ENSMLUG00000013097	-	100	99.029	ENSCHIG00000023663	LSM7	100	99.029	Capra_hircus
ENSMLUG00000013097	-	69	98.592	ENSCAPG00000014534	LSM7	100	98.592	Cavia_aperea
ENSMLUG00000013097	-	100	97.087	ENSCPOG00000014025	LSM7	100	99.010	Cavia_porcellus
ENSMLUG00000013097	-	98	99.010	ENSCCAG00000035456	LSM7	99	99.010	Cebus_capucinus
ENSMLUG00000013097	-	100	97.087	ENSCATG00000023543	LSM7	100	97.087	Cercocebus_atys
ENSMLUG00000013097	-	100	97.087	ENSCLAG00000011635	LSM7	100	97.087	Chinchilla_lanigera
ENSMLUG00000013097	-	100	97.087	ENSCSAG00000011599	LSM7	100	97.087	Chlorocebus_sabaeus
ENSMLUG00000013097	-	70	95.833	ENSCPBG00000021317	LSM7	77	95.833	Chrysemys_picta_bellii
ENSMLUG00000013097	-	93	80.208	ENSCING00000022134	-	97	80.208	Ciona_intestinalis
ENSMLUG00000013097	-	100	97.087	ENSCANG00000035525	LSM7	100	97.087	Colobus_angolensis_palliatus
ENSMLUG00000013097	-	87	88.889	ENSCGRG00001016005	-	92	88.889	Cricetulus_griseus_chok1gshd
ENSMLUG00000013097	-	100	96.117	ENSCGRG00001000807	-	100	96.117	Cricetulus_griseus_chok1gshd
ENSMLUG00000013097	-	87	88.889	ENSCGRG00000006821	-	92	88.889	Cricetulus_griseus_crigri
ENSMLUG00000013097	-	99	98.039	ENSCGRG00000014355	-	98	98.039	Cricetulus_griseus_crigri
ENSMLUG00000013097	-	99	93.137	ENSCSEG00000014900	lsm7	86	94.059	Cynoglossus_semilaevis
ENSMLUG00000013097	-	99	94.118	ENSCVAG00000021091	lsm7	94	94.118	Cyprinodon_variegatus
ENSMLUG00000013097	-	100	92.233	ENSDARG00000058328	lsm7	100	92.233	Danio_rerio
ENSMLUG00000013097	-	98	99.010	ENSDORG00000024460	Lsm7	99	99.010	Dipodomys_ordii
ENSMLUG00000013097	-	94	76.531	FBgn0261068	LSm7	89	76.531	Drosophila_melanogaster
ENSMLUG00000013097	-	99	96.078	ENSETEG00000012788	LSM7	100	96.078	Echinops_telfairi
ENSMLUG00000013097	-	100	83.495	ENSEBUG00000016992	lsm7	99	83.495	Eptatretus_burgeri
ENSMLUG00000013097	-	81	59.036	ENSEBUG00000010470	-	79	59.036	Eptatretus_burgeri
ENSMLUG00000013097	-	100	95.146	ENSECAG00000001440	LSM7	66	95.146	Equus_caballus
ENSMLUG00000013097	-	100	96.117	ENSFCAG00000003445	LSM7	100	96.117	Felis_catus
ENSMLUG00000013097	-	98	96.040	ENSFALG00000011912	LSM7	100	96.040	Ficedula_albicollis
ENSMLUG00000013097	-	93	98.958	ENSFDAG00000007661	LSM7	100	98.958	Fukomys_damarensis
ENSMLUG00000013097	-	89	94.565	ENSFHEG00000006349	lsm7	90	95.050	Fundulus_heteroclitus
ENSMLUG00000013097	-	100	92.233	ENSGMOG00000013320	lsm7	100	92.233	Gadus_morhua
ENSMLUG00000013097	-	100	93.204	ENSGAFG00000013902	lsm7	100	93.204	Gambusia_affinis
ENSMLUG00000013097	-	100	92.233	ENSGACG00000010390	lsm7	100	92.233	Gasterosteus_aculeatus
ENSMLUG00000013097	-	100	97.087	ENSGGOG00000010172	LSM7	100	97.087	Gorilla_gorilla
ENSMLUG00000013097	-	99	93.137	ENSHBUG00000004616	lsm7	100	91.262	Haplochromis_burtoni
ENSMLUG00000013097	-	100	97.087	ENSHGLG00000010587	LSM7	100	97.087	Heterocephalus_glaber_female
ENSMLUG00000013097	-	100	97.087	ENSHGLG00100000852	LSM7	100	97.087	Heterocephalus_glaber_male
ENSMLUG00000013097	-	98	93.069	ENSHCOG00000020252	lsm7	100	93.069	Hippocampus_comes
ENSMLUG00000013097	-	100	92.233	ENSIPUG00000024724	lsm7	100	92.233	Ictalurus_punctatus
ENSMLUG00000013097	-	99	99.020	ENSSTOG00000028372	LSM7	99	99.010	Ictidomys_tridecemlineatus
ENSMLUG00000013097	-	98	97.030	ENSJJAG00000001936	Lsm7	98	97.030	Jaculus_jaculus
ENSMLUG00000013097	-	100	93.204	ENSKMAG00000022151	lsm7	100	93.204	Kryptolebias_marmoratus
ENSMLUG00000013097	-	100	92.233	ENSLBEG00000005203	lsm7	100	92.233	Labrus_bergylta
ENSMLUG00000013097	-	100	97.087	ENSLACG00000015700	LSM7	100	97.087	Latimeria_chalumnae
ENSMLUG00000013097	-	100	96.117	ENSLOCG00000004356	lsm7	100	96.117	Lepisosteus_oculatus
ENSMLUG00000013097	-	99	99.020	ENSLAFG00000029302	LSM7	99	99.020	Loxodonta_africana
ENSMLUG00000013097	-	100	97.087	ENSMFAG00000044572	LSM7	100	97.087	Macaca_fascicularis
ENSMLUG00000013097	-	100	97.087	ENSMMUG00000000452	LSM7	99	99.010	Macaca_mulatta
ENSMLUG00000013097	-	100	97.087	ENSMNEG00000004393	LSM7	100	97.087	Macaca_nemestrina
ENSMLUG00000013097	-	100	97.087	ENSMLEG00000030852	LSM7	100	99.010	Mandrillus_leucophaeus
ENSMLUG00000013097	-	100	91.262	ENSMAMG00000005410	lsm7	100	91.262	Mastacembelus_armatus
ENSMLUG00000013097	-	100	91.262	ENSMZEG00005028055	lsm7	100	91.262	Maylandia_zebra
ENSMLUG00000013097	-	100	95.146	ENSMGAG00000000750	LSM7	89	95.146	Meleagris_gallopavo
ENSMLUG00000013097	-	100	97.087	ENSMAUG00000009276	Lsm7	100	97.087	Mesocricetus_auratus
ENSMLUG00000013097	-	100	98.058	ENSMICG00000009988	-	100	98.058	Microcebus_murinus
ENSMLUG00000013097	-	100	97.087	ENSMICG00000028619	-	100	97.087	Microcebus_murinus
ENSMLUG00000013097	-	100	96.117	ENSMOCG00000016925	Lsm7	100	96.117	Microtus_ochrogaster
ENSMLUG00000013097	-	100	92.233	ENSMMOG00000019645	lsm7	98	92.233	Mola_mola
ENSMLUG00000013097	-	100	96.117	ENSMODG00000004722	LSM7	100	96.117	Monodelphis_domestica
ENSMLUG00000013097	-	100	91.262	ENSMALG00000014511	lsm7	79	91.262	Monopterus_albus
ENSMLUG00000013097	-	100	94.175	MGP_CAROLIEiJ_G0015607	Lsm7	100	94.175	Mus_caroli
ENSMLUG00000013097	-	100	94.175	ENSMUSG00000035215	Lsm7	100	94.175	Mus_musculus
ENSMLUG00000013097	-	100	94.175	MGP_PahariEiJ_G0031020	Lsm7	100	94.175	Mus_pahari
ENSMLUG00000013097	-	100	94.175	MGP_SPRETEiJ_G0016425	Lsm7	100	94.175	Mus_spretus
ENSMLUG00000013097	-	100	95.146	ENSNGAG00000021637	Lsm7	100	95.146	Nannospalax_galili
ENSMLUG00000013097	-	99	93.137	ENSNBRG00000015770	lsm7	88	93.137	Neolamprologus_brichardi
ENSMLUG00000013097	-	91	93.617	ENSNBRG00000001237	-	82	92.233	Neolamprologus_brichardi
ENSMLUG00000013097	-	100	97.087	ENSNLEG00000002265	LSM7	100	97.087	Nomascus_leucogenys
ENSMLUG00000013097	-	100	76.699	ENSODEG00000008190	-	100	76.699	Octodon_degus
ENSMLUG00000013097	-	100	90.291	ENSODEG00000018769	-	100	90.291	Octodon_degus
ENSMLUG00000013097	-	100	97.087	ENSODEG00000013590	-	100	97.087	Octodon_degus
ENSMLUG00000013097	-	100	91.262	ENSONIG00000001801	lsm7	89	91.262	Oreochromis_niloticus
ENSMLUG00000013097	-	100	94.175	ENSORLG00000023951	lsm7	100	92.233	Oryzias_latipes
ENSMLUG00000013097	-	100	94.175	ENSORLG00020022226	lsm7	100	92.233	Oryzias_latipes_hni
ENSMLUG00000013097	-	100	94.175	ENSORLG00015020044	lsm7	94	93.137	Oryzias_latipes_hsok
ENSMLUG00000013097	-	100	92.233	ENSOMEG00000012806	lsm7	100	92.233	Oryzias_melastigma
ENSMLUG00000013097	-	100	85.437	ENSOGAG00000024373	-	100	85.437	Otolemur_garnettii
ENSMLUG00000013097	-	99	97.059	ENSOGAG00000000144	-	100	97.059	Otolemur_garnettii
ENSMLUG00000013097	-	100	99.029	ENSOARG00000014013	LSM7	100	99.029	Ovis_aries
ENSMLUG00000013097	-	100	97.087	ENSPPAG00000026500	LSM7	100	97.087	Pan_paniscus
ENSMLUG00000013097	-	100	96.117	ENSPPRG00000008624	LSM7	100	96.117	Panthera_pardus
ENSMLUG00000013097	-	98	98.020	ENSPTIG00000016252	LSM7	98	98.020	Panthera_tigris_altaica
ENSMLUG00000013097	-	100	97.087	ENSPTRG00000010233	LSM7	100	97.087	Pan_troglodytes
ENSMLUG00000013097	-	100	97.087	ENSPANG00000020668	LSM7	100	97.087	Papio_anubis
ENSMLUG00000013097	-	100	94.175	ENSPKIG00000011325	lsm7	100	94.175	Paramormyrops_kingsleyae
ENSMLUG00000013097	-	98	97.030	ENSPSIG00000017149	LSM7	89	97.030	Pelodiscus_sinensis
ENSMLUG00000013097	-	100	92.233	ENSPMGG00000006498	lsm7	100	92.233	Periophthalmus_magnuspinnatus
ENSMLUG00000013097	-	100	96.117	ENSPCIG00000030454	LSM7	99	98.020	Phascolarctos_cinereus
ENSMLUG00000013097	-	100	94.175	ENSPFOG00000012467	lsm7	91	94.175	Poecilia_formosa
ENSMLUG00000013097	-	100	94.175	ENSPLAG00000000252	lsm7	94	94.059	Poecilia_latipinna
ENSMLUG00000013097	-	100	94.175	ENSPMEG00000000587	lsm7	94	94.059	Poecilia_mexicana
ENSMLUG00000013097	-	78	74.074	ENSPREG00000016718	lsm7	65	74.074	Poecilia_reticulata
ENSMLUG00000013097	-	71	95.890	ENSPPYG00000009348	-	50	95.890	Pongo_abelii
ENSMLUG00000013097	-	100	97.087	ENSPCOG00000017177	LSM7	99	99.010	Propithecus_coquereli
ENSMLUG00000013097	-	100	91.262	ENSPNYG00000006938	lsm7	100	91.262	Pundamilia_nyererei
ENSMLUG00000013097	-	100	92.233	ENSPNAG00000010141	lsm7	99	94.059	Pygocentrus_nattereri
ENSMLUG00000013097	-	100	95.146	ENSRNOG00000019552	Lsm7	100	95.146	Rattus_norvegicus
ENSMLUG00000013097	-	100	97.087	ENSRBIG00000035978	LSM7	100	97.087	Rhinopithecus_bieti
ENSMLUG00000013097	-	100	97.087	ENSRROG00000034044	LSM7	100	97.087	Rhinopithecus_roxellana
ENSMLUG00000013097	-	86	47.826	YNL147W	-	80	47.826	Saccharomyces_cerevisiae
ENSMLUG00000013097	-	100	97.087	ENSSBOG00000034899	LSM7	100	97.087	Saimiri_boliviensis_boliviensis
ENSMLUG00000013097	-	100	92.233	ENSSFOG00015006728	lsm7	100	92.233	Scleropages_formosus
ENSMLUG00000013097	-	100	93.204	ENSSMAG00000004195	lsm7	94	93.204	Scophthalmus_maximus
ENSMLUG00000013097	-	100	92.233	ENSSDUG00000001863	lsm7	100	92.233	Seriola_dumerili
ENSMLUG00000013097	-	100	92.233	ENSSLDG00000016339	lsm7	100	92.233	Seriola_lalandi_dorsalis
ENSMLUG00000013097	-	100	92.233	ENSSPAG00000015221	lsm7	100	92.233	Stegastes_partitus
ENSMLUG00000013097	-	98	99.010	ENSSSCG00000013463	LSM7	99	99.010	Sus_scrofa
ENSMLUG00000013097	-	98	96.040	ENSTGUG00000000067	LSM7	100	96.040	Taeniopygia_guttata
ENSMLUG00000013097	-	100	92.233	ENSTRUG00000022913	lsm7	100	92.233	Takifugu_rubripes
ENSMLUG00000013097	-	100	92.233	ENSTNIG00000015525	lsm7	100	92.233	Tetraodon_nigroviridis
ENSMLUG00000013097	-	68	85.714	ENSTBEG00000016602	LSM7	100	85.714	Tupaia_belangeri
ENSMLUG00000013097	-	100	98.058	ENSUAMG00000000912	LSM7	86	98.058	Ursus_americanus
ENSMLUG00000013097	-	99	97.059	ENSUMAG00000006556	LSM7	80	97.059	Ursus_maritimus
ENSMLUG00000013097	-	69	97.183	ENSVVUG00000002640	LSM7	65	97.183	Vulpes_vulpes
ENSMLUG00000013097	-	98	96.040	ENSXETG00000022166	lsm7	100	96.040	Xenopus_tropicalis
ENSMLUG00000013097	-	98	95.050	ENSXCOG00000002572	lsm7	99	95.050	Xiphophorus_couchianus
ENSMLUG00000013097	-	100	95.146	ENSXMAG00000018630	lsm7	100	93.204	Xiphophorus_maculatus