EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000013577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 9954 bases
Position: chrGL429777:6157712-6167665
Accession: 102440959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000012357	LSM	PF01423.22	1.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000013579	-	409	XM_006084123	ENSMLUP00000012357	85 (aa)	XP_006084185	G1PN55

Gene Model

Click here to download ENSMLUG00000013577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000013577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000013577	-	100	100.000	ENSMLUG00000027932	-	80	100.000
ENSMLUG00000013577	-	100	100.000	ENSMLUG00000029201	-	80	100.000
ENSMLUG00000013577	-	100	81.176	ENSMLUG00000026269	-	70	79.730
ENSMLUG00000013577	-	78	51.515	ENSMLUG00000026355	LSM6	83	51.515
ENSMLUG00000013577	-	100	100.000	ENSMLUG00000026149	-	80	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000013577	-	100	100.000	ENSG00000139343	SNRPF	99	100.000	Homo_sapiens
ENSMLUG00000013577	-	100	97.647	ENSAPOG00000003377	snrpf	66	97.647	Acanthochromis_polyacanthus
ENSMLUG00000013577	-	88	86.667	ENSAMEG00000018718	-	86	87.838	Ailuropoda_melanoleuca
ENSMLUG00000013577	-	100	100.000	ENSAMEG00000002166	-	100	100.000	Ailuropoda_melanoleuca
ENSMLUG00000013577	-	99	97.619	ENSACIG00000013216	snrpf	99	97.619	Amphilophus_citrinellus
ENSMLUG00000013577	-	99	97.619	ENSAOCG00000015108	snrpf	99	97.619	Amphiprion_ocellaris
ENSMLUG00000013577	-	99	97.619	ENSAPEG00000022022	snrpf	99	97.619	Amphiprion_percula
ENSMLUG00000013577	-	99	97.619	ENSATEG00000022625	snrpf	90	97.619	Anabas_testudineus
ENSMLUG00000013577	-	100	98.824	ENSACAG00000014073	SNRPF	98	98.824	Anolis_carolinensis
ENSMLUG00000013577	-	84	91.549	ENSANAG00000020297	-	65	91.549	Aotus_nancymaae
ENSMLUG00000013577	-	87	68.919	ENSANAG00000025860	-	83	68.919	Aotus_nancymaae
ENSMLUG00000013577	-	100	100.000	ENSANAG00000032845	SNRPF	99	100.000	Aotus_nancymaae
ENSMLUG00000013577	-	99	97.619	ENSACLG00000016066	snrpf	99	97.619	Astatotilapia_calliptera
ENSMLUG00000013577	-	87	94.595	ENSAMXG00000007421	snrpf	86	94.595	Astyanax_mexicanus
ENSMLUG00000013577	-	91	93.506	ENSBTAG00000050012	-	91	93.243	Bos_taurus
ENSMLUG00000013577	-	100	100.000	ENSBTAG00000016271	SNRPF	99	100.000	Bos_taurus
ENSMLUG00000013577	-	91	72.727	WBGene00004918	snr-5	85	75.000	Caenorhabditis_elegans
ENSMLUG00000013577	-	100	100.000	ENSCJAG00000002705	-	99	100.000	Callithrix_jacchus
ENSMLUG00000013577	-	100	100.000	ENSCAFG00000006395	-	77	100.000	Canis_familiaris
ENSMLUG00000013577	-	84	94.366	ENSCAFG00000031151	-	85	94.521	Canis_familiaris
ENSMLUG00000013577	-	92	88.462	ENSCAFG00020013161	-	74	97.143	Canis_lupus_dingo
ENSMLUG00000013577	-	84	94.366	ENSCAFG00020010823	-	85	94.521	Canis_lupus_dingo
ENSMLUG00000013577	-	95	93.827	ENSTSYG00000031636	-	61	95.890	Carlito_syrichta
ENSMLUG00000013577	-	87	86.486	ENSTSYG00000030635	-	86	86.486	Carlito_syrichta
ENSMLUG00000013577	-	100	94.186	ENSTSYG00000036502	-	99	94.186	Carlito_syrichta
ENSMLUG00000013577	-	100	100.000	ENSCAPG00000007242	SNRPF	100	100.000	Cavia_aperea
ENSMLUG00000013577	-	100	100.000	ENSCPOG00000013898	SNRPF	99	100.000	Cavia_porcellus
ENSMLUG00000013577	-	100	98.824	ENSCCAG00000017356	-	99	98.824	Cebus_capucinus
ENSMLUG00000013577	-	100	100.000	ENSCCAG00000037378	-	99	100.000	Cebus_capucinus
ENSMLUG00000013577	-	99	90.476	ENSCCAG00000033627	-	57	91.781	Cebus_capucinus
ENSMLUG00000013577	-	100	100.000	ENSCLAG00000007200	SNRPF	99	100.000	Chinchilla_lanigera
ENSMLUG00000013577	-	100	100.000	ENSCSAG00000003602	-	69	100.000	Chlorocebus_sabaeus
ENSMLUG00000013577	-	74	100.000	ENSCHOG00000009392	SNRPF	98	100.000	Choloepus_hoffmanni
ENSMLUG00000013577	-	100	88.235	ENSCPBG00000001985	-	88	90.541	Chrysemys_picta_bellii
ENSMLUG00000013577	-	87	91.892	ENSCPBG00000006227	-	86	91.892	Chrysemys_picta_bellii
ENSMLUG00000013577	-	100	89.412	ENSCPBG00000026463	-	86	90.541	Chrysemys_picta_bellii
ENSMLUG00000013577	-	100	94.118	ENSCPBG00000024287	-	67	94.118	Chrysemys_picta_bellii
ENSMLUG00000013577	-	100	87.059	ENSCSAVG00000007498	-	84	89.189	Ciona_savignyi
ENSMLUG00000013577	-	86	93.151	ENSCGRG00001008965	-	57	93.151	Cricetulus_griseus_chok1gshd
ENSMLUG00000013577	-	100	100.000	ENSCGRG00001017100	-	99	100.000	Cricetulus_griseus_chok1gshd
ENSMLUG00000013577	-	92	93.590	ENSCGRG00000018878	-	91	93.151	Cricetulus_griseus_crigri
ENSMLUG00000013577	-	100	100.000	ENSCGRG00000000336	-	99	100.000	Cricetulus_griseus_crigri
ENSMLUG00000013577	-	87	95.946	ENSCSEG00000004748	snrpf	86	95.946	Cynoglossus_semilaevis
ENSMLUG00000013577	-	100	97.647	ENSCVAG00000000397	snrpf	67	97.647	Cyprinodon_variegatus
ENSMLUG00000013577	-	100	95.402	ENSDARG00000105037	snrpf	99	95.402	Danio_rerio
ENSMLUG00000013577	-	87	83.784	ENSDNOG00000049373	-	64	83.784	Dasypus_novemcinctus
ENSMLUG00000013577	-	100	98.824	ENSDNOG00000048989	-	76	98.824	Dasypus_novemcinctus
ENSMLUG00000013577	-	100	100.000	ENSDNOG00000043775	-	54	100.000	Dasypus_novemcinctus
ENSMLUG00000013577	-	82	98.571	ENSDORG00000029740	-	85	98.571	Dipodomys_ordii
ENSMLUG00000013577	-	84	88.732	ENSDORG00000025351	-	99	88.732	Dipodomys_ordii
ENSMLUG00000013577	-	99	78.571	FBgn0000426	SmF	83	82.192	Drosophila_melanogaster
ENSMLUG00000013577	-	100	100.000	ENSETEG00000001558	-	99	100.000	Echinops_telfairi
ENSMLUG00000013577	-	96	75.610	ENSEBUG00000001793	-	72	86.567	Eptatretus_burgeri
ENSMLUG00000013577	-	100	100.000	ENSECAG00000019817	SNRPF	69	100.000	Equus_caballus
ENSMLUG00000013577	-	100	100.000	ENSEEUG00000013509	SNRPF	100	100.000	Erinaceus_europaeus
ENSMLUG00000013577	-	87	94.595	ENSELUG00000003121	RUXF	86	94.595	Esox_lucius
ENSMLUG00000013577	-	100	91.765	ENSELUG00000007737	RUXF	85	93.243	Esox_lucius
ENSMLUG00000013577	-	100	100.000	ENSFCAG00000029966	-	99	100.000	Felis_catus
ENSMLUG00000013577	-	87	75.676	ENSFCAG00000021942	-	85	75.676	Felis_catus
ENSMLUG00000013577	-	98	78.313	ENSFCAG00000031148	-	71	76.623	Felis_catus
ENSMLUG00000013577	-	100	100.000	ENSFALG00000010799	SNRPF	99	100.000	Ficedula_albicollis
ENSMLUG00000013577	-	100	100.000	ENSFDAG00000002831	-	99	100.000	Fukomys_damarensis
ENSMLUG00000013577	-	100	97.647	ENSFHEG00000003240	snrpf	75	97.647	Fundulus_heteroclitus
ENSMLUG00000013577	-	100	97.647	ENSGMOG00000007741	snrpf	100	97.647	Gadus_morhua
ENSMLUG00000013577	-	100	100.000	ENSGALG00000011409	SNRPF	99	100.000	Gallus_gallus
ENSMLUG00000013577	-	99	97.619	ENSGAFG00000016187	snrpf	97	97.619	Gambusia_affinis
ENSMLUG00000013577	-	100	96.471	ENSGACG00000020055	snrpf	100	96.471	Gasterosteus_aculeatus
ENSMLUG00000013577	-	87	93.243	ENSGAGG00000012945	-	68	94.595	Gopherus_agassizii
ENSMLUG00000013577	-	72	96.721	ENSGAGG00000020974	-	51	96.721	Gopherus_agassizii
ENSMLUG00000013577	-	71	91.667	ENSGAGG00000011163	-	100	91.667	Gopherus_agassizii
ENSMLUG00000013577	-	93	91.139	ENSGAGG00000022991	-	80	94.118	Gopherus_agassizii
ENSMLUG00000013577	-	80	86.765	ENSGAGG00000014132	-	82	86.765	Gopherus_agassizii
ENSMLUG00000013577	-	100	100.000	ENSGGOG00000001127	-	99	100.000	Gorilla_gorilla
ENSMLUG00000013577	-	98	80.723	ENSGGOG00000039936	-	82	78.378	Gorilla_gorilla
ENSMLUG00000013577	-	92	75.641	ENSGGOG00000039564	-	89	74.324	Gorilla_gorilla
ENSMLUG00000013577	-	100	100.000	ENSHGLG00000009108	SNRPF	99	100.000	Heterocephalus_glaber_female
ENSMLUG00000013577	-	100	98.824	ENSHGLG00000021172	-	99	98.824	Heterocephalus_glaber_female
ENSMLUG00000013577	-	100	98.824	ENSHGLG00100019596	-	99	98.824	Heterocephalus_glaber_male
ENSMLUG00000013577	-	100	100.000	ENSHGLG00100008103	-	100	100.000	Heterocephalus_glaber_male
ENSMLUG00000013577	-	74	85.714	ENSHCOG00000018663	snrpf	55	85.714	Hippocampus_comes
ENSMLUG00000013577	-	100	97.647	ENSIPUG00000018994	snrpf	99	97.647	Ictalurus_punctatus
ENSMLUG00000013577	-	100	100.000	ENSSTOG00000010434	-	99	100.000	Ictidomys_tridecemlineatus
ENSMLUG00000013577	-	100	84.706	ENSJJAG00000010502	-	88	86.486	Jaculus_jaculus
ENSMLUG00000013577	-	100	81.176	ENSJJAG00000004558	-	88	82.432	Jaculus_jaculus
ENSMLUG00000013577	-	100	100.000	ENSJJAG00000011272	-	99	100.000	Jaculus_jaculus
ENSMLUG00000013577	-	79	94.030	ENSJJAG00000004828	-	100	94.030	Jaculus_jaculus
ENSMLUG00000013577	-	99	97.619	ENSKMAG00000013566	snrpf	98	97.619	Kryptolebias_marmoratus
ENSMLUG00000013577	-	100	96.471	ENSLBEG00000008800	snrpf	99	96.471	Labrus_bergylta
ENSMLUG00000013577	-	100	100.000	ENSLACG00000002456	-	73	100.000	Latimeria_chalumnae
ENSMLUG00000013577	-	87	94.595	ENSLOCG00000015744	snrpf	86	94.595	Lepisosteus_oculatus
ENSMLUG00000013577	-	100	100.000	ENSLAFG00000017426	SNRPF	99	100.000	Loxodonta_africana
ENSMLUG00000013577	-	99	96.429	ENSMAMG00000016593	snrpf	99	96.429	Mastacembelus_armatus
ENSMLUG00000013577	-	99	97.619	ENSMZEG00005014701	snrpf	99	97.619	Maylandia_zebra
ENSMLUG00000013577	-	99	100.000	ENSMGAG00000011453	-	76	100.000	Meleagris_gallopavo
ENSMLUG00000013577	-	87	100.000	ENSMAUG00000019737	-	100	100.000	Mesocricetus_auratus
ENSMLUG00000013577	-	87	100.000	ENSMAUG00000016909	-	100	100.000	Mesocricetus_auratus
ENSMLUG00000013577	-	72	93.443	ENSMAUG00000010289	-	76	93.443	Mesocricetus_auratus
ENSMLUG00000013577	-	87	94.595	ENSMAUG00000008799	-	86	94.595	Mesocricetus_auratus
ENSMLUG00000013577	-	87	93.243	ENSMICG00000030494	-	59	93.243	Microcebus_murinus
ENSMLUG00000013577	-	100	100.000	ENSMICG00000012153	-	99	100.000	Microcebus_murinus
ENSMLUG00000013577	-	80	83.824	ENSMOCG00000020220	-	87	83.824	Microtus_ochrogaster
ENSMLUG00000013577	-	87	85.135	ENSMOCG00000022166	-	81	85.135	Microtus_ochrogaster
ENSMLUG00000013577	-	100	100.000	ENSMOCG00000020437	Snrpf	99	100.000	Microtus_ochrogaster
ENSMLUG00000013577	-	100	96.471	ENSMMOG00000007127	snrpf	100	96.471	Mola_mola
ENSMLUG00000013577	-	100	100.000	ENSMODG00000008091	SNRPF	75	100.000	Monodelphis_domestica
ENSMLUG00000013577	-	99	97.619	ENSMALG00000012328	snrpf	99	97.619	Monopterus_albus
ENSMLUG00000013577	-	100	100.000	MGP_CAROLIEiJ_G0015735	-	99	100.000	Mus_caroli
ENSMLUG00000013577	-	100	100.000	ENSMUSG00000020018	Snrpf	99	100.000	Mus_musculus
ENSMLUG00000013577	-	100	100.000	MGP_PahariEiJ_G0031350	Snrpf	99	100.000	Mus_pahari
ENSMLUG00000013577	-	100	100.000	MGP_SPRETEiJ_G0016553	Snrpf	99	100.000	Mus_spretus
ENSMLUG00000013577	-	100	100.000	ENSMPUG00000007176	-	76	100.000	Mustela_putorius_furo
ENSMLUG00000013577	-	74	90.476	ENSNGAG00000005851	-	71	90.000	Nannospalax_galili
ENSMLUG00000013577	-	100	100.000	ENSNGAG00000024292	-	99	100.000	Nannospalax_galili
ENSMLUG00000013577	-	100	97.647	ENSNBRG00000011682	snrpf	87	97.647	Neolamprologus_brichardi
ENSMLUG00000013577	-	87	70.270	ENSMEUG00000000671	SNRPF	87	70.270	Notamacropus_eugenii
ENSMLUG00000013577	-	100	100.000	ENSODEG00000010328	-	99	100.000	Octodon_degus
ENSMLUG00000013577	-	100	100.000	ENSOCUG00000010925	SNRPF	75	100.000	Oryctolagus_cuniculus
ENSMLUG00000013577	-	87	94.595	ENSORLG00020008216	snrpf	87	94.595	Oryzias_latipes_hni
ENSMLUG00000013577	-	87	94.595	ENSORLG00015007418	snrpf	87	94.595	Oryzias_latipes_hsok
ENSMLUG00000013577	-	99	96.429	ENSOMEG00000003018	snrpf	99	96.429	Oryzias_melastigma
ENSMLUG00000013577	-	100	97.647	ENSOGAG00000030323	-	99	97.647	Otolemur_garnettii
ENSMLUG00000013577	-	100	100.000	ENSOARG00000011853	-	74	100.000	Ovis_aries
ENSMLUG00000013577	-	98	80.723	ENSPPAG00000037544	-	82	78.378	Pan_paniscus
ENSMLUG00000013577	-	92	75.641	ENSPPAG00000037479	-	89	74.324	Pan_paniscus
ENSMLUG00000013577	-	98	77.108	ENSPPRG00000007449	-	76	77.027	Panthera_pardus
ENSMLUG00000013577	-	100	100.000	ENSPPRG00000005875	-	99	100.000	Panthera_pardus
ENSMLUG00000013577	-	100	100.000	ENSPTIG00000007520	SNRPF	99	100.000	Panthera_tigris_altaica
ENSMLUG00000013577	-	98	79.518	ENSPTIG00000005117	-	88	77.027	Panthera_tigris_altaica
ENSMLUG00000013577	-	92	75.641	ENSPTRG00000047717	-	89	74.324	Pan_troglodytes
ENSMLUG00000013577	-	98	80.723	ENSPTRG00000043814	-	82	78.378	Pan_troglodytes
ENSMLUG00000013577	-	100	97.647	ENSPKIG00000014784	snrpf	93	97.647	Paramormyrops_kingsleyae
ENSMLUG00000013577	-	100	100.000	ENSPSIG00000016462	SNRPF	99	100.000	Pelodiscus_sinensis
ENSMLUG00000013577	-	100	96.471	ENSPMGG00000023548	snrpf	100	96.471	Periophthalmus_magnuspinnatus
ENSMLUG00000013577	-	100	100.000	ENSPEMG00000023326	Snrpf	99	100.000	Peromyscus_maniculatus_bairdii
ENSMLUG00000013577	-	99	97.619	ENSPLAG00000023932	snrpf	99	97.619	Poecilia_latipinna
ENSMLUG00000013577	-	99	97.619	ENSPMEG00000003377	snrpf	99	97.619	Poecilia_mexicana
ENSMLUG00000013577	-	99	97.619	ENSPREG00000022635	snrpf	97	97.619	Poecilia_reticulata
ENSMLUG00000013577	-	100	100.000	ENSPPYG00000004847	-	99	100.000	Pongo_abelii
ENSMLUG00000013577	-	100	100.000	ENSPCOG00000023833	-	99	100.000	Propithecus_coquereli
ENSMLUG00000013577	-	100	100.000	ENSPVAG00000009036	SNRPF	99	100.000	Pteropus_vampyrus
ENSMLUG00000013577	-	99	97.619	ENSPNYG00000021712	snrpf	99	97.619	Pundamilia_nyererei
ENSMLUG00000013577	-	99	96.429	ENSPNAG00000019117	snrpf	99	96.429	Pygocentrus_nattereri
ENSMLUG00000013577	-	100	100.000	ENSRNOG00000005556	Snrpf	99	100.000	Rattus_norvegicus
ENSMLUG00000013577	-	100	96.471	ENSRBIG00000030414	-	99	96.471	Rhinopithecus_bieti
ENSMLUG00000013577	-	100	96.471	ENSRROG00000021975	-	99	96.471	Rhinopithecus_roxellana
ENSMLUG00000013577	-	82	59.155	YPR182W	SMX3	83	59.155	Saccharomyces_cerevisiae
ENSMLUG00000013577	-	100	100.000	ENSSBOG00000036179	-	99	100.000	Saimiri_boliviensis_boliviensis
ENSMLUG00000013577	-	87	85.135	ENSSBOG00000032297	-	85	85.135	Saimiri_boliviensis_boliviensis
ENSMLUG00000013577	-	91	80.000	ENSSBOG00000027638	-	90	80.000	Saimiri_boliviensis_boliviensis
ENSMLUG00000013577	-	100	98.824	ENSSBOG00000012868	-	99	98.824	Saimiri_boliviensis_boliviensis
ENSMLUG00000013577	-	100	100.000	ENSSHAG00000012294	SNRPF	77	100.000	Sarcophilus_harrisii
ENSMLUG00000013577	-	75	96.875	ENSSFOG00015021523	snrpf	96	96.875	Scleropages_formosus
ENSMLUG00000013577	-	100	96.471	ENSSMAG00000005533	snrpf	98	96.471	Scophthalmus_maximus
ENSMLUG00000013577	-	75	96.875	ENSSDUG00000016283	snrpf	76	96.875	Seriola_dumerili
ENSMLUG00000013577	-	99	97.619	ENSSLDG00000005119	snrpf	98	97.619	Seriola_lalandi_dorsalis
ENSMLUG00000013577	-	94	73.750	ENSSLDG00000003885	-	90	77.027	Seriola_lalandi_dorsalis
ENSMLUG00000013577	-	99	100.000	ENSSPUG00000014590	-	99	100.000	Sphenodon_punctatus
ENSMLUG00000013577	-	100	97.647	ENSSPAG00000003283	snrpf	97	97.647	Stegastes_partitus
ENSMLUG00000013577	-	100	100.000	ENSSSCG00000000895	SNRPF	99	100.000	Sus_scrofa
ENSMLUG00000013577	-	68	94.828	ENSTRUG00000014956	snrpf	84	94.828	Takifugu_rubripes
ENSMLUG00000013577	-	100	96.471	ENSTNIG00000012672	snrpf	99	96.471	Tetraodon_nigroviridis
ENSMLUG00000013577	-	87	70.270	ENSTTRG00000006070	SNRPF	86	70.270	Tursiops_truncatus
ENSMLUG00000013577	-	100	87.059	ENSUAMG00000001101	-	87	89.189	Ursus_americanus
ENSMLUG00000013577	-	100	100.000	ENSUAMG00000008176	-	99	100.000	Ursus_americanus
ENSMLUG00000013577	-	87	89.189	ENSUMAG00000006177	-	87	89.189	Ursus_maritimus
ENSMLUG00000013577	-	100	100.000	ENSUMAG00000003528	-	99	100.000	Ursus_maritimus
ENSMLUG00000013577	-	100	100.000	ENSVPAG00000008712	-	99	100.000	Vicugna_pacos
ENSMLUG00000013577	-	91	92.208	ENSVVUG00000023821	-	95	91.892	Vulpes_vulpes
ENSMLUG00000013577	-	87	75.000	ENSXETG00000021630	snrpf	87	75.000	Xenopus_tropicalis
ENSMLUG00000013577	-	99	97.619	ENSXCOG00000013860	snrpf	97	97.619	Xiphophorus_couchianus
ENSMLUG00000013577	-	99	97.619	ENSXMAG00000015448	snrpf	99	97.619	Xiphophorus_maculatus