EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000013824 (Gene tree)
Gene ID: 102429530
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 171822 bases
Position: chrGL430079:942891-1114712
Accession: 102429530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000012586	R3H	PF01424.22	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000013833	R3HDM1-201	3708	XM_006100437	ENSMLUP00000012586	1106 (aa)	XP_006100499	G1PNQ1

Gene Model

Click here to download ENSMLUG00000013824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000013824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000013824	R3HDM1	67	51.157	ENSMLUG00000013530	ARPP21	88	52.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000013824	R3HDM1	100	93.038	ENSG00000048991	R3HDM1	100	93.038	Homo_sapiens
ENSMLUG00000013824	R3HDM1	89	47.746	ENSAPOG00000020850	r3hdm1	97	46.886	Acanthochromis_polyacanthus
ENSMLUG00000013824	R3HDM1	100	95.570	ENSAMEG00000014886	R3HDM1	100	95.570	Ailuropoda_melanoleuca
ENSMLUG00000013824	R3HDM1	89	47.037	ENSAOCG00000005192	r3hdm1	99	46.939	Amphiprion_ocellaris
ENSMLUG00000013824	R3HDM1	89	46.590	ENSAPEG00000016108	r3hdm1	99	46.667	Amphiprion_percula
ENSMLUG00000013824	R3HDM1	89	45.042	ENSATEG00000000232	r3hdm1	99	45.455	Anabas_testudineus
ENSMLUG00000013824	R3HDM1	100	78.488	ENSAPLG00000015231	R3HDM1	100	78.668	Anas_platyrhynchos
ENSMLUG00000013824	R3HDM1	100	75.567	ENSACAG00000001676	R3HDM1	100	76.527	Anolis_carolinensis
ENSMLUG00000013824	R3HDM1	100	93.580	ENSANAG00000035334	R3HDM1	100	93.580	Aotus_nancymaae
ENSMLUG00000013824	R3HDM1	79	49.568	ENSACLG00000027282	r3hdm1	94	49.568	Astatotilapia_calliptera
ENSMLUG00000013824	R3HDM1	93	62.791	ENSAMXG00000003536	r3hdm1	100	55.393	Astyanax_mexicanus
ENSMLUG00000013824	R3HDM1	93	72.182	ENSAMXG00000012861	R3HDM1	100	60.717	Astyanax_mexicanus
ENSMLUG00000013824	R3HDM1	100	91.140	ENSBTAG00000013302	R3HDM1	100	91.404	Bos_taurus
ENSMLUG00000013824	R3HDM1	100	93.038	ENSCJAG00000011718	R3HDM1	100	93.038	Callithrix_jacchus
ENSMLUG00000013824	R3HDM1	100	95.841	ENSCAFG00000005075	R3HDM1	100	95.841	Canis_familiaris
ENSMLUG00000013824	R3HDM1	100	95.750	ENSCAFG00020016119	R3HDM1	100	95.750	Canis_lupus_dingo
ENSMLUG00000013824	R3HDM1	100	94.123	ENSCHIG00000020851	R3HDM1	100	94.304	Capra_hircus
ENSMLUG00000013824	R3HDM1	100	88.411	ENSCPOG00000012784	R3HDM1	100	88.586	Cavia_porcellus
ENSMLUG00000013824	R3HDM1	100	92.676	ENSCCAG00000027199	R3HDM1	100	92.676	Cebus_capucinus
ENSMLUG00000013824	R3HDM1	100	92.676	ENSCATG00000023642	R3HDM1	100	92.676	Cercocebus_atys
ENSMLUG00000013824	R3HDM1	100	87.873	ENSCLAG00000007962	R3HDM1	100	88.040	Chinchilla_lanigera
ENSMLUG00000013824	R3HDM1	100	89.073	ENSCSAG00000016356	R3HDM1	100	90.351	Chlorocebus_sabaeus
ENSMLUG00000013824	R3HDM1	87	82.128	ENSCHOG00000013638	R3HDM1	91	82.265	Choloepus_hoffmanni
ENSMLUG00000013824	R3HDM1	88	79.406	ENSCPBG00000009645	R3HDM1	100	90.406	Chrysemys_picta_bellii
ENSMLUG00000013824	R3HDM1	100	92.948	ENSCANG00000034748	R3HDM1	100	92.948	Colobus_angolensis_palliatus
ENSMLUG00000013824	R3HDM1	99	88.282	ENSCGRG00001012357	R3hdm1	97	88.282	Cricetulus_griseus_chok1gshd
ENSMLUG00000013824	R3HDM1	99	90.926	ENSCGRG00000012080	R3hdm1	100	91.030	Cricetulus_griseus_crigri
ENSMLUG00000013824	R3HDM1	89	42.416	ENSCSEG00000008944	r3hdm1	99	43.474	Cynoglossus_semilaevis
ENSMLUG00000013824	R3HDM1	89	48.356	ENSCVAG00000007582	r3hdm1	99	47.864	Cyprinodon_variegatus
ENSMLUG00000013824	R3HDM1	100	89.937	ENSDNOG00000000771	R3HDM1	100	89.937	Dasypus_novemcinctus
ENSMLUG00000013824	R3HDM1	100	81.752	ENSETEG00000013606	R3HDM1	100	82.114	Echinops_telfairi
ENSMLUG00000013824	R3HDM1	64	41.876	ENSEBUG00000014746	arpp21	97	42.620	Eptatretus_burgeri
ENSMLUG00000013824	R3HDM1	100	94.756	ENSEASG00005007392	R3HDM1	100	94.937	Equus_asinus_asinus
ENSMLUG00000013824	R3HDM1	100	95.027	ENSECAG00000019114	R3HDM1	100	95.118	Equus_caballus
ENSMLUG00000013824	R3HDM1	91	85.793	ENSEEUG00000012589	R3HDM1	91	85.793	Erinaceus_europaeus
ENSMLUG00000013824	R3HDM1	93	50.268	ENSELUG00000014413	r3hdm1	100	51.613	Esox_lucius
ENSMLUG00000013824	R3HDM1	94	54.898	ENSELUG00000004909	R3HDM1	99	55.051	Esox_lucius
ENSMLUG00000013824	R3HDM1	100	95.118	ENSFCAG00000027113	R3HDM1	100	95.298	Felis_catus
ENSMLUG00000013824	R3HDM1	75	72.158	ENSFALG00000013731	R3HDM1	93	67.413	Ficedula_albicollis
ENSMLUG00000013824	R3HDM1	100	88.323	ENSFDAG00000016478	R3HDM1	99	93.911	Fukomys_damarensis
ENSMLUG00000013824	R3HDM1	89	46.218	ENSFHEG00000018713	r3hdm1	99	45.725	Fundulus_heteroclitus
ENSMLUG00000013824	R3HDM1	57	64.130	ENSGMOG00000006042	-	74	64.130	Gadus_morhua
ENSMLUG00000013824	R3HDM1	100	55.726	ENSGALG00000012246	R3HDM1	99	84.918	Gallus_gallus
ENSMLUG00000013824	R3HDM1	79	49.036	ENSGAFG00000006203	r3hdm1	94	48.927	Gambusia_affinis
ENSMLUG00000013824	R3HDM1	86	48.233	ENSGACG00000014925	r3hdm1	99	47.469	Gasterosteus_aculeatus
ENSMLUG00000013824	R3HDM1	100	77.277	ENSGAGG00000007840	R3HDM1	100	77.006	Gopherus_agassizii
ENSMLUG00000013824	R3HDM1	100	92.586	ENSGGOG00000008156	R3HDM1	100	92.586	Gorilla_gorilla
ENSMLUG00000013824	R3HDM1	100	88.499	ENSHGLG00000015718	R3HDM1	99	93.727	Heterocephalus_glaber_female
ENSMLUG00000013824	R3HDM1	100	68.535	ENSHGLG00100015374	-	100	68.445	Heterocephalus_glaber_male
ENSMLUG00000013824	R3HDM1	100	88.323	ENSHGLG00100003184	-	100	88.372	Heterocephalus_glaber_male
ENSMLUG00000013824	R3HDM1	79	44.956	ENSHCOG00000013366	r3hdm1	88	59.750	Hippocampus_comes
ENSMLUG00000013824	R3HDM1	81	66.348	ENSIPUG00000001676	R3HDM1	99	66.268	Ictalurus_punctatus
ENSMLUG00000013824	R3HDM1	85	66.867	ENSIPUG00000013629	r3hdm1	95	68.438	Ictalurus_punctatus
ENSMLUG00000013824	R3HDM1	100	93.309	ENSSTOG00000007572	R3HDM1	99	95.387	Ictidomys_tridecemlineatus
ENSMLUG00000013824	R3HDM1	95	70.297	ENSLACG00000005334	R3HDM1	100	78.935	Latimeria_chalumnae
ENSMLUG00000013824	R3HDM1	100	66.019	ENSLOCG00000001641	r3hdm1	100	66.165	Lepisosteus_oculatus
ENSMLUG00000013824	R3HDM1	100	91.045	ENSLAFG00000009065	R3HDM1	100	91.045	Loxodonta_africana
ENSMLUG00000013824	R3HDM1	100	92.857	ENSMFAG00000030331	R3HDM1	100	96.059	Macaca_fascicularis
ENSMLUG00000013824	R3HDM1	100	92.676	ENSMMUG00000009844	R3HDM1	100	92.676	Macaca_mulatta
ENSMLUG00000013824	R3HDM1	100	92.676	ENSMNEG00000027793	R3HDM1	100	96.059	Macaca_nemestrina
ENSMLUG00000013824	R3HDM1	100	92.948	ENSMLEG00000043189	R3HDM1	100	92.948	Mandrillus_leucophaeus
ENSMLUG00000013824	R3HDM1	89	48.427	ENSMAMG00000004532	r3hdm1	99	48.184	Mastacembelus_armatus
ENSMLUG00000013824	R3HDM1	89	48.596	ENSMZEG00005003157	r3hdm1	99	48.306	Maylandia_zebra
ENSMLUG00000013824	R3HDM1	100	78.198	ENSMGAG00000012461	R3HDM1	100	78.198	Meleagris_gallopavo
ENSMLUG00000013824	R3HDM1	100	88.158	ENSMAUG00000010315	R3hdm1	100	91.030	Mesocricetus_auratus
ENSMLUG00000013824	R3HDM1	96	69.027	ENSMICG00000042655	-	100	87.698	Microcebus_murinus
ENSMLUG00000013824	R3HDM1	100	92.419	ENSMICG00000005900	-	100	92.419	Microcebus_murinus
ENSMLUG00000013824	R3HDM1	90	77.462	ENSMODG00000000923	R3HDM1	97	77.652	Monodelphis_domestica
ENSMLUG00000013824	R3HDM1	99	46.453	ENSMALG00000009000	r3hdm1	100	45.883	Monopterus_albus
ENSMLUG00000013824	R3HDM1	100	87.094	MGP_CAROLIEiJ_G0014543	R3hdm1	99	92.804	Mus_caroli
ENSMLUG00000013824	R3HDM1	100	87.182	ENSMUSG00000056211	R3hdm1	99	92.804	Mus_musculus
ENSMLUG00000013824	R3HDM1	100	87.006	MGP_PahariEiJ_G0027779	R3hdm1	99	92.251	Mus_pahari
ENSMLUG00000013824	R3HDM1	100	87.357	MGP_SPRETEiJ_G0015350	R3hdm1	99	92.989	Mus_spretus
ENSMLUG00000013824	R3HDM1	100	95.298	ENSMPUG00000002412	R3HDM1	100	95.298	Mustela_putorius_furo
ENSMLUG00000013824	R3HDM1	100	92.767	ENSNLEG00000008622	R3HDM1	100	92.767	Nomascus_leucogenys
ENSMLUG00000013824	R3HDM1	89	72.008	ENSMEUG00000011784	R3HDM1	100	72.211	Notamacropus_eugenii
ENSMLUG00000013824	R3HDM1	100	87.357	ENSODEG00000008607	R3HDM1	100	89.369	Octodon_degus
ENSMLUG00000013824	R3HDM1	95	48.285	ENSONIG00000012017	r3hdm1	98	48.063	Oreochromis_niloticus
ENSMLUG00000013824	R3HDM1	100	80.845	ENSOANG00000007987	R3HDM1	100	80.845	Ornithorhynchus_anatinus
ENSMLUG00000013824	R3HDM1	89	91.996	ENSOCUG00000017366	R3HDM1	98	91.996	Oryctolagus_cuniculus
ENSMLUG00000013824	R3HDM1	89	43.647	ENSORLG00000004297	r3hdm1	99	44.368	Oryzias_latipes
ENSMLUG00000013824	R3HDM1	89	45.298	ENSORLG00015017355	r3hdm1	99	46.380	Oryzias_latipes_hsok
ENSMLUG00000013824	R3HDM1	100	92.224	ENSOGAG00000003136	R3HDM1	100	93.128	Otolemur_garnettii
ENSMLUG00000013824	R3HDM1	100	93.852	ENSOARG00000010788	R3HDM1	100	94.033	Ovis_aries
ENSMLUG00000013824	R3HDM1	100	93.309	ENSPPAG00000027858	R3HDM1	100	93.309	Pan_paniscus
ENSMLUG00000013824	R3HDM1	100	94.937	ENSPPRG00000002626	R3HDM1	100	95.118	Panthera_pardus
ENSMLUG00000013824	R3HDM1	100	94.846	ENSPTIG00000016581	R3HDM1	100	95.027	Panthera_tigris_altaica
ENSMLUG00000013824	R3HDM1	100	93.219	ENSPTRG00000012494	R3HDM1	100	93.219	Pan_troglodytes
ENSMLUG00000013824	R3HDM1	100	92.857	ENSPANG00000026448	R3HDM1	100	92.857	Papio_anubis
ENSMLUG00000013824	R3HDM1	84	75.949	ENSPKIG00000004328	r3hdm1	91	76.433	Paramormyrops_kingsleyae
ENSMLUG00000013824	R3HDM1	100	77.728	ENSPSIG00000012915	R3HDM1	100	77.818	Pelodiscus_sinensis
ENSMLUG00000013824	R3HDM1	100	88.060	ENSPEMG00000015187	R3hdm1	100	90.698	Peromyscus_maniculatus_bairdii
ENSMLUG00000013824	R3HDM1	82	52.890	ENSPMAG00000003369	-	98	42.843	Petromyzon_marinus
ENSMLUG00000013824	R3HDM1	100	83.648	ENSPCIG00000002491	R3HDM1	100	83.827	Phascolarctos_cinereus
ENSMLUG00000013824	R3HDM1	89	46.531	ENSPFOG00000015036	r3hdm1	99	46.083	Poecilia_formosa
ENSMLUG00000013824	R3HDM1	89	46.405	ENSPLAG00000018042	r3hdm1	99	46.220	Poecilia_latipinna
ENSMLUG00000013824	R3HDM1	89	46.552	ENSPMEG00000023947	r3hdm1	99	46.264	Poecilia_mexicana
ENSMLUG00000013824	R3HDM1	89	48.230	ENSPREG00000007902	r3hdm1	88	61.995	Poecilia_reticulata
ENSMLUG00000013824	R3HDM1	100	91.960	ENSPPYG00000012815	R3HDM1	100	91.960	Pongo_abelii
ENSMLUG00000013824	R3HDM1	100	80.922	ENSPCAG00000006208	R3HDM1	94	92.424	Procavia_capensis
ENSMLUG00000013824	R3HDM1	100	90.614	ENSPCOG00000012698	R3HDM1	100	91.572	Propithecus_coquereli
ENSMLUG00000013824	R3HDM1	100	86.166	ENSPVAG00000006098	R3HDM1	100	86.528	Pteropus_vampyrus
ENSMLUG00000013824	R3HDM1	83	75.962	ENSPNAG00000005436	R3HDM1	99	76.129	Pygocentrus_nattereri
ENSMLUG00000013824	R3HDM1	67	39.060	ENSPNAG00000004162	arpp21	88	49.284	Pygocentrus_nattereri
ENSMLUG00000013824	R3HDM1	93	63.466	ENSPNAG00000013952	r3hdm1	100	63.529	Pygocentrus_nattereri
ENSMLUG00000013824	R3HDM1	100	86.743	ENSRNOG00000004099	R3hdm1	100	86.655	Rattus_norvegicus
ENSMLUG00000013824	R3HDM1	100	92.405	ENSRBIG00000033317	R3HDM1	100	98.155	Rhinopithecus_bieti
ENSMLUG00000013824	R3HDM1	100	93.038	ENSRROG00000034534	R3HDM1	100	93.038	Rhinopithecus_roxellana
ENSMLUG00000013824	R3HDM1	100	92.586	ENSSBOG00000020389	R3HDM1	100	92.586	Saimiri_boliviensis_boliviensis
ENSMLUG00000013824	R3HDM1	100	83.935	ENSSHAG00000016999	R3HDM1	100	84.116	Sarcophilus_harrisii
ENSMLUG00000013824	R3HDM1	93	70.218	ENSSFOG00015014134	r3hdm1	100	70.316	Scleropages_formosus
ENSMLUG00000013824	R3HDM1	100	56.106	ENSSFOG00015019851	-	100	55.713	Scleropages_formosus
ENSMLUG00000013824	R3HDM1	99	45.150	ENSSMAG00000001669	r3hdm1	99	45.022	Scophthalmus_maximus
ENSMLUG00000013824	R3HDM1	89	47.104	ENSSDUG00000010749	r3hdm1	99	47.569	Seriola_dumerili
ENSMLUG00000013824	R3HDM1	99	46.978	ENSSLDG00000004499	r3hdm1	99	47.054	Seriola_lalandi_dorsalis
ENSMLUG00000013824	R3HDM1	69	83.389	ENSSARG00000000352	-	69	83.389	Sorex_araneus
ENSMLUG00000013824	R3HDM1	100	79.369	ENSSPUG00000004167	R3HDM1	100	79.279	Sphenodon_punctatus
ENSMLUG00000013824	R3HDM1	89	49.380	ENSSPAG00000004648	r3hdm1	99	49.654	Stegastes_partitus
ENSMLUG00000013824	R3HDM1	100	94.846	ENSSSCG00000015692	R3HDM1	100	94.937	Sus_scrofa
ENSMLUG00000013824	R3HDM1	100	73.136	ENSTGUG00000011750	R3HDM1	100	72.956	Taeniopygia_guttata
ENSMLUG00000013824	R3HDM1	79	47.078	ENSTRUG00000011654	r3hdm1	93	46.470	Takifugu_rubripes
ENSMLUG00000013824	R3HDM1	87	46.386	ENSTNIG00000010362	r3hdm1	99	46.185	Tetraodon_nigroviridis
ENSMLUG00000013824	R3HDM1	100	87.613	ENSTTRG00000003935	R3HDM1	100	87.794	Tursiops_truncatus
ENSMLUG00000013824	R3HDM1	70	96.149	ENSUAMG00000024806	R3HDM1	99	94.834	Ursus_americanus
ENSMLUG00000013824	R3HDM1	100	90.778	ENSUMAG00000005552	R3HDM1	100	91.734	Ursus_maritimus
ENSMLUG00000013824	R3HDM1	93	92.982	ENSVPAG00000007333	R3HDM1	93	92.982	Vicugna_pacos
ENSMLUG00000013824	R3HDM1	100	92.801	ENSVVUG00000006457	R3HDM1	100	92.801	Vulpes_vulpes
ENSMLUG00000013824	R3HDM1	90	66.901	ENSXETG00000019330	r3hdm1	100	67.001	Xenopus_tropicalis
ENSMLUG00000013824	R3HDM1	67	49.936	ENSXCOG00000017448	r3hdm1	94	49.109	Xiphophorus_couchianus
ENSMLUG00000013824	R3HDM1	89	46.598	ENSXMAG00000007885	r3hdm1	99	45.093	Xiphophorus_maculatus