EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000014547 (Gene tree)
Gene ID: 102429240
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 11150 bases
Position: chrGL429770:27019156-27030305
Accession: 102429240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000013238	RRM_1	PF00076.22	3.9e-58	1	4
ENSMLUP00000013238	RRM_1	PF00076.22	3.9e-58	2	4
ENSMLUP00000013238	RRM_1	PF00076.22	3.9e-58	3	4
ENSMLUP00000013238	RRM_1	PF00076.22	3.9e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000014550	NCL-201	2154	XM_006082634	ENSMLUP00000013238	717 (aa)	XP_006082696	G1PQ98

Gene Model

Click here to download ENSMLUG00000014547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000014547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000014547	NCL	54	65.891	ENSMLUG00000013420	-	100	67.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000014547	NCL	62	95.238	ENSG00000115053	NCL	100	90.541	Homo_sapiens
ENSMLUG00000014547	NCL	53	97.889	ENSAMEG00000016289	NCL	92	87.029	Ailuropoda_melanoleuca
ENSMLUG00000014547	NCL	53	97.098	ENSANAG00000035814	-	92	86.515	Aotus_nancymaae
ENSMLUG00000014547	NCL	99	68.362	ENSANAG00000024378	-	85	74.074	Aotus_nancymaae
ENSMLUG00000014547	NCL	76	92.642	ENSBTAG00000026909	-	95	92.642	Bos_taurus
ENSMLUG00000014547	NCL	94	85.944	ENSBTAG00000016174	NCL	92	85.970	Bos_taurus
ENSMLUG00000014547	NCL	75	90.574	ENSBTAG00000050728	-	87	90.574	Bos_taurus
ENSMLUG00000014547	NCL	61	90.952	ENSBTAG00000051320	-	76	90.610	Bos_taurus
ENSMLUG00000014547	NCL	53	97.098	ENSCJAG00000013538	NCL	92	84.766	Callithrix_jacchus
ENSMLUG00000014547	NCL	92	89.107	ENSCAFG00000011037	NCL	92	87.897	Canis_familiaris
ENSMLUG00000014547	NCL	84	89.803	ENSCAFG00020023145	NCL	89	89.309	Canis_lupus_dingo
ENSMLUG00000014547	NCL	77	96.903	ENSCHIG00000021052	-	100	96.167	Capra_hircus
ENSMLUG00000014547	NCL	92	73.364	ENSCHIG00000012143	-	91	78.959	Capra_hircus
ENSMLUG00000014547	NCL	85	86.386	ENSCHIG00000010894	-	91	86.872	Capra_hircus
ENSMLUG00000014547	NCL	92	79.669	ENSCHIG00000026149	-	93	79.610	Capra_hircus
ENSMLUG00000014547	NCL	90	70.279	ENSTSYG00000036886	-	85	80.952	Carlito_syrichta
ENSMLUG00000014547	NCL	92	86.343	ENSTSYG00000004355	-	92	86.039	Carlito_syrichta
ENSMLUG00000014547	NCL	95	83.793	ENSTSYG00000029779	-	98	83.590	Carlito_syrichta
ENSMLUG00000014547	NCL	53	88.918	ENSCAPG00000009405	NCL	91	78.560	Cavia_aperea
ENSMLUG00000014547	NCL	92	81.487	ENSCPOG00000001034	NCL	92	81.791	Cavia_porcellus
ENSMLUG00000014547	NCL	53	97.098	ENSCCAG00000021040	-	92	85.258	Cebus_capucinus
ENSMLUG00000014547	NCL	55	88.442	ENSCCAG00000000551	-	85	88.557	Cebus_capucinus
ENSMLUG00000014547	NCL	92	87.082	ENSCATG00000037033	NCL	92	86.170	Cercocebus_atys
ENSMLUG00000014547	NCL	92	82.701	ENSCLAG00000013080	NCL	92	83.156	Chinchilla_lanigera
ENSMLUG00000014547	NCL	61	97.273	ENSCSAG00000006660	NCL	95	97.273	Chlorocebus_sabaeus
ENSMLUG00000014547	NCL	61	76.027	ENSCHOG00000012860	NCL	88	76.136	Choloepus_hoffmanni
ENSMLUG00000014547	NCL	92	78.064	ENSCGRG00001024315	-	91	77.492	Cricetulus_griseus_chok1gshd
ENSMLUG00000014547	NCL	92	67.216	ENSCGRG00001022350	-	95	66.617	Cricetulus_griseus_chok1gshd
ENSMLUG00000014547	NCL	92	65.243	ENSCGRG00000000507	-	93	64.865	Cricetulus_griseus_crigri
ENSMLUG00000014547	NCL	85	78.675	ENSCGRG00000017894	-	88	78.803	Cricetulus_griseus_crigri
ENSMLUG00000014547	NCL	92	86.103	ENSDNOG00000010783	-	92	86.707	Dasypus_novemcinctus
ENSMLUG00000014547	NCL	99	75.104	ENSDNOG00000046347	-	99	74.965	Dasypus_novemcinctus
ENSMLUG00000014547	NCL	53	84.433	ENSDORG00000012513	-	91	76.444	Dipodomys_ordii
ENSMLUG00000014547	NCL	51	73.770	ENSDORG00000023596	-	92	65.649	Dipodomys_ordii
ENSMLUG00000014547	NCL	83	67.480	ENSETEG00000008139	-	99	67.297	Echinops_telfairi
ENSMLUG00000014547	NCL	62	61.486	ENSETEG00000008553	-	88	61.991	Echinops_telfairi
ENSMLUG00000014547	NCL	53	91.579	ENSETEG00000018937	-	85	78.862	Echinops_telfairi
ENSMLUG00000014547	NCL	53	91.247	ENSETEG00000014756	-	86	91.293	Echinops_telfairi
ENSMLUG00000014547	NCL	89	85.054	ENSEASG00005008488	NCL	100	97.857	Equus_asinus_asinus
ENSMLUG00000014547	NCL	92	86.165	ENSECAG00000021868	NCL	92	86.316	Equus_caballus
ENSMLUG00000014547	NCL	53	90.501	ENSEEUG00000005913	NCL	85	78.140	Erinaceus_europaeus
ENSMLUG00000014547	NCL	92	88.822	ENSFCAG00000027622	NCL	92	87.462	Felis_catus
ENSMLUG00000014547	NCL	91	82.848	ENSFDAG00000014291	NCL	92	82.389	Fukomys_damarensis
ENSMLUG00000014547	NCL	92	87.082	ENSGGOG00000004300	NCL	100	83.889	Gorilla_gorilla
ENSMLUG00000014547	NCL	91	73.780	ENSHGLG00000011069	-	92	73.252	Heterocephalus_glaber_female
ENSMLUG00000014547	NCL	53	94.987	ENSHGLG00000002031	-	92	83.005	Heterocephalus_glaber_female
ENSMLUG00000014547	NCL	53	94.723	ENSHGLG00100014537	-	92	82.398	Heterocephalus_glaber_male
ENSMLUG00000014547	NCL	72	85.333	ENSHGLG00100000745	-	82	85.411	Heterocephalus_glaber_male
ENSMLUG00000014547	NCL	55	82.609	ENSJJAG00000016165	Ncl	93	75.753	Jaculus_jaculus
ENSMLUG00000014547	NCL	91	72.907	ENSLAFG00000013061	NCL	91	72.231	Loxodonta_africana
ENSMLUG00000014547	NCL	92	87.234	ENSMFAG00000040385	NCL	92	86.170	Macaca_fascicularis
ENSMLUG00000014547	NCL	92	87.234	ENSMMUG00000018094	NCL	100	92.532	Macaca_mulatta
ENSMLUG00000014547	NCL	62	94.331	ENSMNEG00000023839	NCL	100	92.532	Macaca_nemestrina
ENSMLUG00000014547	NCL	92	87.234	ENSMLEG00000028935	NCL	92	86.322	Mandrillus_leucophaeus
ENSMLUG00000014547	NCL	100	85.794	ENSMICG00000002538	-	92	83.587	Microcebus_murinus
ENSMLUG00000014547	NCL	92	66.768	ENSMICG00000029975	-	86	78.431	Microcebus_murinus
ENSMLUG00000014547	NCL	92	77.727	MGP_CAROLIEiJ_G0014362	Ncl	92	75.680	Mus_caroli
ENSMLUG00000014547	NCL	92	77.879	ENSMUSG00000026234	Ncl	92	75.831	Mus_musculus
ENSMLUG00000014547	NCL	92	75.904	MGP_PahariEiJ_G0027599	Ncl	92	75.602	Mus_pahari
ENSMLUG00000014547	NCL	92	76.169	MGP_SPRETEiJ_G0015164	Ncl	92	75.452	Mus_spretus
ENSMLUG00000014547	NCL	92	77.463	ENSNGAG00000002454	-	91	76.716	Nannospalax_galili
ENSMLUG00000014547	NCL	52	73.333	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSMLUG00000014547	NCL	86	75.769	ENSNLEG00000014107	-	85	76.087	Nomascus_leucogenys
ENSMLUG00000014547	NCL	100	80.529	ENSODEG00000003281	-	100	80.389	Octodon_degus
ENSMLUG00000014547	NCL	61	67.403	ENSODEG00000007803	-	90	62.589	Octodon_degus
ENSMLUG00000014547	NCL	62	79.365	ENSODEG00000002441	-	85	85.593	Octodon_degus
ENSMLUG00000014547	NCL	60	87.863	ENSOGAG00000027852	NCL	84	87.863	Otolemur_garnettii
ENSMLUG00000014547	NCL	63	78.174	ENSOARG00000004072	-	92	69.431	Ovis_aries
ENSMLUG00000014547	NCL	88	88.542	ENSOARG00000013270	-	100	92.308	Ovis_aries
ENSMLUG00000014547	NCL	85	74.959	ENSOARG00000013710	-	94	76.786	Ovis_aries
ENSMLUG00000014547	NCL	91	81.325	ENSOARG00000020709	-	92	80.873	Ovis_aries
ENSMLUG00000014547	NCL	62	93.197	ENSPPAG00000011619	NCL	92	84.954	Pan_paniscus
ENSMLUG00000014547	NCL	92	88.502	ENSPPRG00000012603	NCL	92	87.292	Panthera_pardus
ENSMLUG00000014547	NCL	91	88.397	ENSPTIG00000010393	NCL	91	86.870	Panthera_tigris_altaica
ENSMLUG00000014547	NCL	91	98.636	ENSPTRG00000013025	NCL	99	83.704	Pan_troglodytes
ENSMLUG00000014547	NCL	92	87.234	ENSPANG00000010292	NCL	92	86.170	Papio_anubis
ENSMLUG00000014547	NCL	62	84.270	ENSPPYG00000013265	NCL	92	79.217	Pongo_abelii
ENSMLUG00000014547	NCL	91	79.237	ENSPCOG00000004160	-	86	89.418	Propithecus_coquereli
ENSMLUG00000014547	NCL	92	85.455	ENSPCOG00000003051	-	91	84.545	Propithecus_coquereli
ENSMLUG00000014547	NCL	92	90.274	ENSPVAG00000000297	NCL	92	89.666	Pteropus_vampyrus
ENSMLUG00000014547	NCL	92	77.492	ENSRNOG00000018273	Ncl	92	76.284	Rattus_norvegicus
ENSMLUG00000014547	NCL	86	97.232	ENSRBIG00000035396	-	60	95.302	Rhinopithecus_bieti
ENSMLUG00000014547	NCL	92	82.371	ENSRBIG00000037525	-	91	81.459	Rhinopithecus_bieti
ENSMLUG00000014547	NCL	89	98.221	ENSRROG00000028756	-	91	86.018	Rhinopithecus_roxellana
ENSMLUG00000014547	NCL	100	81.399	ENSRROG00000036103	-	99	83.414	Rhinopithecus_roxellana
ENSMLUG00000014547	NCL	53	96.834	ENSSBOG00000029193	-	92	85.325	Saimiri_boliviensis_boliviensis
ENSMLUG00000014547	NCL	56	74.429	ENSSBOG00000023094	-	84	74.661	Saimiri_boliviensis_boliviensis
ENSMLUG00000014547	NCL	74	89.066	ENSSBOG00000027549	-	94	89.066	Saimiri_boliviensis_boliviensis
ENSMLUG00000014547	NCL	92	85.224	ENSSSCG00000016275	NCL	92	86.866	Sus_scrofa
ENSMLUG00000014547	NCL	55	84.697	ENSTBEG00000001546	-	85	80.424	Tupaia_belangeri
ENSMLUG00000014547	NCL	65	81.586	ENSTBEG00000002469	-	66	81.429	Tupaia_belangeri
ENSMLUG00000014547	NCL	92	86.474	ENSTTRG00000009094	NCL	91	86.018	Tursiops_truncatus
ENSMLUG00000014547	NCL	86	78.339	ENSUAMG00000005639	NCL	100	93.837	Ursus_americanus
ENSMLUG00000014547	NCL	53	97.889	ENSUMAG00000015789	NCL	92	86.950	Ursus_maritimus
ENSMLUG00000014547	NCL	69	84.928	ENSVPAG00000001796	NCL	69	84.928	Vicugna_pacos
ENSMLUG00000014547	NCL	92	84.977	ENSVVUG00000025564	NCL	91	84.370	Vulpes_vulpes