EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000015217 (Gene tree)
Gene ID: 102440345
Gene Symbol: -
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 11523 bases
Position: chrGL430329:31446-42968
Accession: 102440345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000013868	KH_1	PF00013.29	1.9e-07	1	1
ENSMLUP00000013868	zf-CCHC	PF00098.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000015226	-	1920	XM_006104318	ENSMLUP00000013868	639 (aa)	XP_006104380	G1PRT8

Gene Model

Click here to download ENSMLUG00000015217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000015217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000015217	-	70	94.655	ENSMLUG00000029800	-	77	95.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000015217	-	58	82.322	ENSAPOG00000012341	sf1	59	77.273	Acanthochromis_polyacanthus
ENSMLUG00000015217	-	92	94.567	ENSAMEG00000017828	SF1	91	94.567	Ailuropoda_melanoleuca
ENSMLUG00000015217	-	58	83.467	ENSACIG00000016514	sf1	62	76.471	Amphilophus_citrinellus
ENSMLUG00000015217	-	58	82.058	ENSAOCG00000010934	sf1	59	77.033	Amphiprion_ocellaris
ENSMLUG00000015217	-	58	82.058	ENSAPEG00000009498	sf1	59	77.033	Amphiprion_percula
ENSMLUG00000015217	-	58	82.105	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSMLUG00000015217	-	99	99.525	ENSANAG00000026664	-	99	99.525	Aotus_nancymaae
ENSMLUG00000015217	-	96	87.092	ENSANAG00000022607	-	99	86.899	Aotus_nancymaae
ENSMLUG00000015217	-	57	84.282	ENSACLG00000007633	sf1	61	78.177	Astatotilapia_calliptera
ENSMLUG00000015217	-	58	86.364	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSMLUG00000015217	-	99	99.683	ENSBTAG00000001035	SF1	99	99.683	Bos_taurus
ENSMLUG00000015217	-	99	99.683	ENSCJAG00000002780	SF1	99	99.683	Callithrix_jacchus
ENSMLUG00000015217	-	92	99.323	ENSCAFG00000014239	SF1	93	99.323	Canis_familiaris
ENSMLUG00000015217	-	99	99.683	ENSCAFG00020014381	SF1	99	99.683	Canis_lupus_dingo
ENSMLUG00000015217	-	99	99.683	ENSCHIG00000025867	SF1	99	99.683	Capra_hircus
ENSMLUG00000015217	-	69	98.636	ENSCAPG00000010762	SF1	79	98.636	Cavia_aperea
ENSMLUG00000015217	-	92	99.150	ENSCPOG00000012290	SF1	96	99.035	Cavia_porcellus
ENSMLUG00000015217	-	92	99.323	ENSCCAG00000037881	SF1	94	99.749	Cebus_capucinus
ENSMLUG00000015217	-	99	80.190	ENSCCAG00000023781	-	93	82.752	Cebus_capucinus
ENSMLUG00000015217	-	99	99.683	ENSCATG00000011564	SF1	99	99.683	Cercocebus_atys
ENSMLUG00000015217	-	82	99.232	ENSCSAG00000007258	SF1	95	99.232	Chlorocebus_sabaeus
ENSMLUG00000015217	-	65	93.541	ENSCHOG00000006008	SF1	79	93.541	Choloepus_hoffmanni
ENSMLUG00000015217	-	81	86.486	ENSCPBG00000023763	SF1	66	84.749	Chrysemys_picta_bellii
ENSMLUG00000015217	-	59	58.115	ENSCING00000005564	-	74	60.638	Ciona_intestinalis
ENSMLUG00000015217	-	55	57.865	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSMLUG00000015217	-	99	99.683	ENSCANG00000042201	SF1	99	99.683	Colobus_angolensis_palliatus
ENSMLUG00000015217	-	99	99.208	ENSCGRG00001003677	Sf1	99	99.208	Cricetulus_griseus_chok1gshd
ENSMLUG00000015217	-	82	97.524	ENSCGRG00000001708	Sf1	97	97.524	Cricetulus_griseus_crigri
ENSMLUG00000015217	-	62	79.064	ENSCSEG00000014375	sf1	57	76.316	Cynoglossus_semilaevis
ENSMLUG00000015217	-	58	84.324	ENSCVAG00000001670	sf1	63	78.729	Cyprinodon_variegatus
ENSMLUG00000015217	-	77	81.013	ENSDARG00000008188	sf1	70	78.147	Danio_rerio
ENSMLUG00000015217	-	82	99.040	ENSDNOG00000001282	SF1	95	99.040	Dasypus_novemcinctus
ENSMLUG00000015217	-	99	99.683	ENSDORG00000016334	Sf1	99	99.683	Dipodomys_ordii
ENSMLUG00000015217	-	92	92.308	ENSETEG00000012830	SF1	82	91.282	Echinops_telfairi
ENSMLUG00000015217	-	82	98.848	ENSEASG00005018272	SF1	95	98.848	Equus_asinus_asinus
ENSMLUG00000015217	-	82	99.040	ENSECAG00000024544	SF1	95	99.040	Equus_caballus
ENSMLUG00000015217	-	62	99.491	ENSEEUG00000001058	SF1	100	99.491	Erinaceus_europaeus
ENSMLUG00000015217	-	58	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSMLUG00000015217	-	92	99.323	ENSFCAG00000012231	SF1	93	99.323	Felis_catus
ENSMLUG00000015217	-	90	95.304	ENSFDAG00000009833	SF1	89	95.304	Fukomys_damarensis
ENSMLUG00000015217	-	58	82.850	ENSFHEG00000022656	sf1	59	77.251	Fundulus_heteroclitus
ENSMLUG00000015217	-	50	87.651	ENSGMOG00000007469	sf1	60	87.651	Gadus_morhua
ENSMLUG00000015217	-	57	84.182	ENSGAFG00000019284	sf1	76	80.392	Gambusia_affinis
ENSMLUG00000015217	-	71	89.011	ENSGAGG00000021691	SF1	72	84.749	Gopherus_agassizii
ENSMLUG00000015217	-	58	82.895	ENSHBUG00000011598	sf1	59	77.103	Haplochromis_burtoni
ENSMLUG00000015217	-	92	99.323	ENSHGLG00000009541	SF1	93	99.323	Heterocephalus_glaber_female
ENSMLUG00000015217	-	97	78.662	ENSHGLG00100013879	-	79	98.864	Heterocephalus_glaber_male
ENSMLUG00000015217	-	71	86.752	ENSHGLG00100008255	-	92	86.325	Heterocephalus_glaber_male
ENSMLUG00000015217	-	68	88.966	ENSHGLG00100008076	-	86	86.744	Heterocephalus_glaber_male
ENSMLUG00000015217	-	59	81.347	ENSHCOG00000011388	sf1	58	76.513	Hippocampus_comes
ENSMLUG00000015217	-	72	85.996	ENSSTOG00000024353	-	77	87.558	Ictidomys_tridecemlineatus
ENSMLUG00000015217	-	98	99.682	ENSSTOG00000009790	-	100	99.682	Ictidomys_tridecemlineatus
ENSMLUG00000015217	-	99	99.525	ENSJJAG00000011788	Sf1	99	99.525	Jaculus_jaculus
ENSMLUG00000015217	-	59	82.687	ENSKMAG00000005854	sf1	62	77.725	Kryptolebias_marmoratus
ENSMLUG00000015217	-	75	82.199	ENSLBEG00000019836	sf1	51	86.310	Labrus_bergylta
ENSMLUG00000015217	-	64	79.087	ENSLACG00000018493	SF1	74	78.313	Latimeria_chalumnae
ENSMLUG00000015217	-	58	85.294	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSMLUG00000015217	-	90	99.481	ENSLAFG00000007201	SF1	90	99.481	Loxodonta_africana
ENSMLUG00000015217	-	99	99.683	ENSMFAG00000033122	SF1	99	99.683	Macaca_fascicularis
ENSMLUG00000015217	-	99	99.683	ENSMMUG00000022606	SF1	100	99.683	Macaca_mulatta
ENSMLUG00000015217	-	99	99.683	ENSMNEG00000037901	SF1	99	99.683	Macaca_nemestrina
ENSMLUG00000015217	-	100	98.592	ENSMLEG00000040706	SF1	97	98.592	Mandrillus_leucophaeus
ENSMLUG00000015217	-	58	82.507	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSMLUG00000015217	-	58	82.632	ENSMZEG00005009196	sf1	59	76.869	Maylandia_zebra
ENSMLUG00000015217	-	92	98.816	ENSMAUG00000014064	Sf1	93	98.816	Mesocricetus_auratus
ENSMLUG00000015217	-	99	99.525	ENSMICG00000001202	SF1	99	99.525	Microcebus_murinus
ENSMLUG00000015217	-	92	98.646	ENSMOCG00000022038	Sf1	93	98.646	Microtus_ochrogaster
ENSMLUG00000015217	-	58	82.258	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSMLUG00000015217	-	70	94.407	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSMLUG00000015217	-	58	83.646	ENSMALG00000020521	sf1	68	76.777	Monopterus_albus
ENSMLUG00000015217	-	99	99.049	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSMLUG00000015217	-	99	99.049	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSMLUG00000015217	-	99	99.049	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSMLUG00000015217	-	99	99.049	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSMLUG00000015217	-	99	99.210	ENSMPUG00000012684	SF1	99	99.210	Mustela_putorius_furo
ENSMLUG00000015217	-	92	99.154	ENSNGAG00000005550	Sf1	93	99.154	Nannospalax_galili
ENSMLUG00000015217	-	58	83.690	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSMLUG00000015217	-	99	99.525	ENSNLEG00000005236	-	99	99.525	Nomascus_leucogenys
ENSMLUG00000015217	-	80	97.856	ENSMEUG00000013424	SF1	97	97.856	Notamacropus_eugenii
ENSMLUG00000015217	-	74	98.737	ENSOPRG00000005008	SF1	96	98.737	Ochotona_princeps
ENSMLUG00000015217	-	90	93.599	ENSODEG00000006102	-	88	93.599	Octodon_degus
ENSMLUG00000015217	-	58	82.895	ENSONIG00000015728	sf1	59	77.103	Oreochromis_niloticus
ENSMLUG00000015217	-	63	85.961	ENSOANG00000002909	SF1	96	87.661	Ornithorhynchus_anatinus
ENSMLUG00000015217	-	92	99.323	ENSOCUG00000026486	SF1	94	99.323	Oryctolagus_cuniculus
ENSMLUG00000015217	-	60	80.563	ENSORLG00000011853	sf1	58	77.458	Oryzias_latipes
ENSMLUG00000015217	-	60	80.563	ENSORLG00020011834	sf1	58	77.458	Oryzias_latipes_hni
ENSMLUG00000015217	-	58	80.366	ENSORLG00015012855	sf1	59	76.978	Oryzias_latipes_hsok
ENSMLUG00000015217	-	58	81.937	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSMLUG00000015217	-	92	99.154	ENSOGAG00000016196	SF1	93	99.154	Otolemur_garnettii
ENSMLUG00000015217	-	84	92.349	ENSOARG00000009166	SF1	80	99.781	Ovis_aries
ENSMLUG00000015217	-	96	99.674	ENSPPAG00000002799	-	100	99.674	Pan_paniscus
ENSMLUG00000015217	-	96	99.674	ENSPPRG00000013566	SF1	100	99.674	Panthera_pardus
ENSMLUG00000015217	-	69	98.649	ENSPTIG00000016141	SF1	80	98.649	Panthera_tigris_altaica
ENSMLUG00000015217	-	92	99.323	ENSPTRG00000003846	SF1	97	99.761	Pan_troglodytes
ENSMLUG00000015217	-	92	97.315	ENSPANG00000020754	SF1	95	99.232	Papio_anubis
ENSMLUG00000015217	-	51	80.180	ENSPKIG00000012116	sf1	86	75.668	Paramormyrops_kingsleyae
ENSMLUG00000015217	-	55	86.895	ENSPSIG00000003610	SF1	97	75.098	Pelodiscus_sinensis
ENSMLUG00000015217	-	92	98.816	ENSPEMG00000010463	Sf1	93	98.816	Peromyscus_maniculatus_bairdii
ENSMLUG00000015217	-	99	98.574	ENSPCIG00000018173	SF1	99	98.574	Phascolarctos_cinereus
ENSMLUG00000015217	-	58	85.445	ENSPFOG00000013683	sf1	66	80.779	Poecilia_formosa
ENSMLUG00000015217	-	59	82.124	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSMLUG00000015217	-	59	82.124	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSMLUG00000015217	-	59	81.606	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSMLUG00000015217	-	92	99.323	ENSPPYG00000003098	-	98	99.423	Pongo_abelii
ENSMLUG00000015217	-	82	97.719	ENSPCAG00000013631	SF1	78	97.719	Procavia_capensis
ENSMLUG00000015217	-	99	99.525	ENSPCOG00000027546	SF1	99	99.525	Propithecus_coquereli
ENSMLUG00000015217	-	82	97.909	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSMLUG00000015217	-	58	82.632	ENSPNYG00000004673	sf1	59	76.869	Pundamilia_nyererei
ENSMLUG00000015217	-	58	85.185	ENSPNAG00000013072	sf1	59	78.606	Pygocentrus_nattereri
ENSMLUG00000015217	-	99	99.049	ENSRNOG00000021085	Sf1	99	99.049	Rattus_norvegicus
ENSMLUG00000015217	-	99	95.721	ENSRBIG00000042818	SF1	99	95.721	Rhinopithecus_bieti
ENSMLUG00000015217	-	82	96.737	ENSRROG00000045655	SF1	96	99.205	Rhinopithecus_roxellana
ENSMLUG00000015217	-	96	80.163	ENSSBOG00000022267	-	97	81.373	Saimiri_boliviensis_boliviensis
ENSMLUG00000015217	-	62	93.300	ENSSHAG00000006841	SF1	74	93.548	Sarcophilus_harrisii
ENSMLUG00000015217	-	62	81.000	ENSSFOG00015021978	sf1	55	76.329	Scleropages_formosus
ENSMLUG00000015217	-	65	76.212	ENSSMAG00000007549	sf1	64	75.926	Scophthalmus_maximus
ENSMLUG00000015217	-	81	95.358	ENSSARG00000008180	SF1	100	95.358	Sorex_araneus
ENSMLUG00000015217	-	79	82.759	ENSSPUG00000012907	SF1	86	80.843	Sphenodon_punctatus
ENSMLUG00000015217	-	58	81.530	ENSSPAG00000019060	sf1	58	76.998	Stegastes_partitus
ENSMLUG00000015217	-	99	99.842	ENSSSCG00000013021	SF1	100	99.809	Sus_scrofa
ENSMLUG00000015217	-	82	62.617	ENSTNIG00000004820	sf1	78	69.451	Tetraodon_nigroviridis
ENSMLUG00000015217	-	97	84.142	ENSTBEG00000013133	SF1	80	100.000	Tupaia_belangeri
ENSMLUG00000015217	-	81	94.788	ENSTTRG00000008857	SF1	96	95.155	Tursiops_truncatus
ENSMLUG00000015217	-	82	96.756	ENSUAMG00000011977	SF1	100	96.756	Ursus_americanus
ENSMLUG00000015217	-	77	100.000	ENSUMAG00000007268	SF1	88	100.000	Ursus_maritimus
ENSMLUG00000015217	-	56	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSMLUG00000015217	-	82	99.232	ENSVVUG00000028585	SF1	95	99.232	Vulpes_vulpes
ENSMLUG00000015217	-	97	69.545	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSMLUG00000015217	-	57	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSMLUG00000015217	-	59	81.654	ENSXMAG00000007822	sf1	63	77.934	Xiphophorus_maculatus