EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000015417 (Gene tree)
Gene ID: 102442980
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 30660 bases
Position: chrGL429832:23460-54119
Accession: 102442980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000014060	EST1	PF10374.9	5.8e-25	1	1
ENSMLUP00000014060	EST1_DNA_bind	PF10373.9	1.8e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000015430	SMG7-201	3426	XM_006089847	ENSMLUP00000014060	1141 (aa)	XP_006089909	G1PSB8

Gene Model

Click here to download ENSMLUG00000015417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000015417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000015417	SMG7	99	96.734	ENSG00000116698	SMG7	100	97.222	Homo_sapiens
ENSMLUG00000015417	SMG7	88	71.710	ENSAPOG00000009611	smg7	95	71.710	Acanthochromis_polyacanthus
ENSMLUG00000015417	SMG7	96	93.188	ENSAMEG00000002357	SMG7	100	93.188	Ailuropoda_melanoleuca
ENSMLUG00000015417	SMG7	97	60.017	ENSACIG00000015152	smg7	98	66.210	Amphilophus_citrinellus
ENSMLUG00000015417	SMG7	99	64.657	ENSAOCG00000013538	smg7	99	64.905	Amphiprion_ocellaris
ENSMLUG00000015417	SMG7	99	64.521	ENSAPEG00000007851	smg7	99	64.769	Amphiprion_percula
ENSMLUG00000015417	SMG7	99	62.120	ENSATEG00000006931	smg7	99	62.407	Anabas_testudineus
ENSMLUG00000015417	SMG7	99	81.910	ENSAPLG00000015811	SMG7	99	81.741	Anas_platyrhynchos
ENSMLUG00000015417	SMG7	99	84.020	ENSACAG00000014989	SMG7	100	83.876	Anolis_carolinensis
ENSMLUG00000015417	SMG7	96	96.259	ENSANAG00000028114	SMG7	99	92.621	Aotus_nancymaae
ENSMLUG00000015417	SMG7	99	63.823	ENSACLG00000022079	smg7	99	64.404	Astatotilapia_calliptera
ENSMLUG00000015417	SMG7	99	66.332	ENSAMXG00000020809	smg7	99	66.611	Astyanax_mexicanus
ENSMLUG00000015417	SMG7	99	96.205	ENSBTAG00000008003	SMG7	97	96.205	Bos_taurus
ENSMLUG00000015417	SMG7	99	96.293	ENSCJAG00000005135	SMG7	97	96.293	Callithrix_jacchus
ENSMLUG00000015417	SMG7	99	97.087	ENSCAFG00000013276	SMG7	97	97.087	Canis_familiaris
ENSMLUG00000015417	SMG7	99	97.087	ENSCAFG00020015475	SMG7	97	97.087	Canis_lupus_dingo
ENSMLUG00000015417	SMG7	100	95.881	ENSCHIG00000018192	SMG7	100	95.881	Capra_hircus
ENSMLUG00000015417	SMG7	99	96.117	ENSTSYG00000002667	SMG7	97	96.117	Carlito_syrichta
ENSMLUG00000015417	SMG7	99	96.205	ENSCPOG00000008906	SMG7	99	94.616	Cavia_porcellus
ENSMLUG00000015417	SMG7	96	92.751	ENSCCAG00000028596	SMG7	100	92.751	Cebus_capucinus
ENSMLUG00000015417	SMG7	99	96.823	ENSCATG00000011063	SMG7	97	96.823	Cercocebus_atys
ENSMLUG00000015417	SMG7	99	96.028	ENSCLAG00000010751	SMG7	99	96.028	Chinchilla_lanigera
ENSMLUG00000015417	SMG7	99	96.646	ENSCSAG00000012654	SMG7	97	96.646	Chlorocebus_sabaeus
ENSMLUG00000015417	SMG7	92	88.157	ENSCHOG00000010522	SMG7	93	88.539	Choloepus_hoffmanni
ENSMLUG00000015417	SMG7	99	88.409	ENSCPBG00000015724	SMG7	100	87.731	Chrysemys_picta_bellii
ENSMLUG00000015417	SMG7	96	92.838	ENSCANG00000015680	SMG7	100	92.838	Colobus_angolensis_palliatus
ENSMLUG00000015417	SMG7	99	94.881	ENSCGRG00001013705	Smg7	99	94.881	Cricetulus_griseus_chok1gshd
ENSMLUG00000015417	SMG7	99	94.881	ENSCGRG00000018401	Smg7	99	94.881	Cricetulus_griseus_crigri
ENSMLUG00000015417	SMG7	98	63.132	ENSCVAG00000011842	smg7	100	68.000	Cyprinodon_variegatus
ENSMLUG00000015417	SMG7	99	66.277	ENSDARG00000060767	smg7	99	66.361	Danio_rerio
ENSMLUG00000015417	SMG7	99	95.587	ENSDORG00000007331	Smg7	99	95.587	Dipodomys_ordii
ENSMLUG00000015417	SMG7	96	95.073	ENSETEG00000002654	SMG7	99	95.073	Echinops_telfairi
ENSMLUG00000015417	SMG7	99	97.440	ENSEASG00005006524	SMG7	99	97.440	Equus_asinus_asinus
ENSMLUG00000015417	SMG7	99	97.529	ENSECAG00000004313	SMG7	99	97.529	Equus_caballus
ENSMLUG00000015417	SMG7	95	96.679	ENSEEUG00000002024	SMG7	92	96.679	Erinaceus_europaeus
ENSMLUG00000015417	SMG7	92	76.652	ENSELUG00000010293	smg7	99	64.930	Esox_lucius
ENSMLUG00000015417	SMG7	99	96.999	ENSFCAG00000010900	SMG7	99	97.329	Felis_catus
ENSMLUG00000015417	SMG7	98	82.228	ENSFALG00000003047	SMG7	100	82.143	Ficedula_albicollis
ENSMLUG00000015417	SMG7	99	96.110	ENSFDAG00000012121	SMG7	99	95.989	Fukomys_damarensis
ENSMLUG00000015417	SMG7	99	60.732	ENSFHEG00000011073	smg7	99	60.149	Fundulus_heteroclitus
ENSMLUG00000015417	SMG7	88	67.449	ENSGMOG00000004916	smg7	92	67.449	Gadus_morhua
ENSMLUG00000015417	SMG7	100	81.407	ENSGALG00000004667	SMG7	100	81.240	Gallus_gallus
ENSMLUG00000015417	SMG7	99	60.483	ENSGAFG00000019000	smg7	99	60.067	Gambusia_affinis
ENSMLUG00000015417	SMG7	97	64.768	ENSGACG00000001634	smg7	99	64.799	Gasterosteus_aculeatus
ENSMLUG00000015417	SMG7	99	96.558	ENSGGOG00000002342	SMG7	97	96.558	Gorilla_gorilla
ENSMLUG00000015417	SMG7	99	64.404	ENSHBUG00000003726	smg7	97	71.066	Haplochromis_burtoni
ENSMLUG00000015417	SMG7	98	96.078	ENSHGLG00000009353	SMG7	100	96.078	Heterocephalus_glaber_female
ENSMLUG00000015417	SMG7	99	88.261	ENSHGLG00100004878	-	99	88.261	Heterocephalus_glaber_male
ENSMLUG00000015417	SMG7	98	94.385	ENSHGLG00100009637	-	100	94.385	Heterocephalus_glaber_male
ENSMLUG00000015417	SMG7	99	66.863	ENSIPUG00000016997	smg7	99	67.031	Ictalurus_punctatus
ENSMLUG00000015417	SMG7	99	96.558	ENSSTOG00000000401	SMG7	99	96.558	Ictidomys_tridecemlineatus
ENSMLUG00000015417	SMG7	99	94.440	ENSJJAG00000012351	Smg7	99	94.440	Jaculus_jaculus
ENSMLUG00000015417	SMG7	97	58.814	ENSKMAG00000004900	smg7	100	59.068	Kryptolebias_marmoratus
ENSMLUG00000015417	SMG7	99	62.334	ENSLBEG00000002983	smg7	99	62.252	Labrus_bergylta
ENSMLUG00000015417	SMG7	99	75.431	ENSLACG00000000972	SMG7	99	75.496	Latimeria_chalumnae
ENSMLUG00000015417	SMG7	99	66.917	ENSLOCG00000002010	smg7	99	67.083	Lepisosteus_oculatus
ENSMLUG00000015417	SMG7	99	96.381	ENSLAFG00000008186	SMG7	99	96.381	Loxodonta_africana
ENSMLUG00000015417	SMG7	99	96.734	ENSMFAG00000031653	SMG7	99	96.734	Macaca_fascicularis
ENSMLUG00000015417	SMG7	99	96.823	ENSMMUG00000018458	SMG7	97	96.823	Macaca_mulatta
ENSMLUG00000015417	SMG7	96	92.926	ENSMNEG00000034798	SMG7	100	92.926	Macaca_nemestrina
ENSMLUG00000015417	SMG7	99	96.823	ENSMLEG00000037170	SMG7	97	96.823	Mandrillus_leucophaeus
ENSMLUG00000015417	SMG7	87	63.569	ENSMAMG00000018733	smg7	85	63.713	Mastacembelus_armatus
ENSMLUG00000015417	SMG7	99	64.274	ENSMZEG00005015247	smg7	99	64.404	Maylandia_zebra
ENSMLUG00000015417	SMG7	97	81.443	ENSMGAG00000001561	SMG7	98	81.271	Meleagris_gallopavo
ENSMLUG00000015417	SMG7	99	95.322	ENSMAUG00000019484	Smg7	99	95.450	Mesocricetus_auratus
ENSMLUG00000015417	SMG7	99	96.734	ENSMICG00000007145	SMG7	99	96.734	Microcebus_murinus
ENSMLUG00000015417	SMG7	99	95.322	ENSMOCG00000020748	Smg7	99	95.322	Microtus_ochrogaster
ENSMLUG00000015417	SMG7	99	60.083	ENSMMOG00000001524	smg7	99	60.150	Mola_mola
ENSMLUG00000015417	SMG7	92	85.440	ENSMODG00000007139	SMG7	99	85.440	Monodelphis_domestica
ENSMLUG00000015417	SMG7	96	67.662	ENSMALG00000000061	smg7	93	67.662	Monopterus_albus
ENSMLUG00000015417	SMG7	99	94.969	MGP_CAROLIEiJ_G0014704	Smg7	99	94.616	Mus_caroli
ENSMLUG00000015417	SMG7	99	94.881	ENSMUSG00000042772	Smg7	99	94.881	Mus_musculus
ENSMLUG00000015417	SMG7	99	95.057	MGP_PahariEiJ_G0027940	Smg7	99	95.057	Mus_pahari
ENSMLUG00000015417	SMG7	99	94.969	MGP_SPRETEiJ_G0015511	Smg7	99	94.969	Mus_spretus
ENSMLUG00000015417	SMG7	99	96.137	ENSMPUG00000011732	SMG7	98	96.137	Mustela_putorius_furo
ENSMLUG00000015417	SMG7	99	95.234	ENSNGAG00000009836	Smg7	99	95.234	Nannospalax_galili
ENSMLUG00000015417	SMG7	98	57.573	ENSNBRG00000024343	smg7	98	69.048	Neolamprologus_brichardi
ENSMLUG00000015417	SMG7	99	96.911	ENSNLEG00000018018	SMG7	97	96.911	Nomascus_leucogenys
ENSMLUG00000015417	SMG7	77	86.421	ENSMEUG00000004681	SMG7	77	86.611	Notamacropus_eugenii
ENSMLUG00000015417	SMG7	96	84.384	ENSOPRG00000013942	SMG7	96	84.110	Ochotona_princeps
ENSMLUG00000015417	SMG7	99	95.852	ENSODEG00000010390	SMG7	99	95.852	Octodon_degus
ENSMLUG00000015417	SMG7	99	61.052	ENSONIG00000000277	smg7	99	61.774	Oreochromis_niloticus
ENSMLUG00000015417	SMG7	98	90.337	ENSOANG00000000994	SMG7	100	90.248	Ornithorhynchus_anatinus
ENSMLUG00000015417	SMG7	99	89.497	ENSOCUG00000005887	SMG7	92	89.673	Oryctolagus_cuniculus
ENSMLUG00000015417	SMG7	99	61.487	ENSORLG00000007314	smg7	74	90.000	Oryzias_latipes
ENSMLUG00000015417	SMG7	99	61.905	ENSORLG00020015779	smg7	73	90.000	Oryzias_latipes_hni
ENSMLUG00000015417	SMG7	99	64.157	ENSORLG00015012289	smg7	99	62.448	Oryzias_latipes_hsok
ENSMLUG00000015417	SMG7	99	62.281	ENSOMEG00000002328	smg7	99	62.448	Oryzias_melastigma
ENSMLUG00000015417	SMG7	96	94.982	ENSOGAG00000003107	SMG7	93	94.434	Otolemur_garnettii
ENSMLUG00000015417	SMG7	99	95.940	ENSOARG00000001352	SMG7	97	95.940	Ovis_aries
ENSMLUG00000015417	SMG7	96	92.926	ENSPPAG00000031619	SMG7	100	92.926	Pan_paniscus
ENSMLUG00000015417	SMG7	99	97.176	ENSPPRG00000011222	SMG7	97	97.176	Panthera_pardus
ENSMLUG00000015417	SMG7	97	96.923	ENSPTIG00000007242	SMG7	100	93.275	Panthera_tigris_altaica
ENSMLUG00000015417	SMG7	96	96.715	ENSPTRG00000001764	SMG7	100	92.926	Pan_troglodytes
ENSMLUG00000015417	SMG7	99	96.823	ENSPANG00000004520	SMG7	97	96.823	Papio_anubis
ENSMLUG00000015417	SMG7	99	63.406	ENSPKIG00000007242	smg7	100	67.000	Paramormyrops_kingsleyae
ENSMLUG00000015417	SMG7	99	91.439	ENSPSIG00000012201	SMG7	99	90.733	Pelodiscus_sinensis
ENSMLUG00000015417	SMG7	55	55.612	ENSPMGG00000021833	smg7	91	56.000	Periophthalmus_magnuspinnatus
ENSMLUG00000015417	SMG7	99	94.263	ENSPEMG00000011315	Smg7	99	94.263	Peromyscus_maniculatus_bairdii
ENSMLUG00000015417	SMG7	99	89.915	ENSPCIG00000003786	SMG7	99	90.909	Phascolarctos_cinereus
ENSMLUG00000015417	SMG7	99	62.552	ENSPFOG00000019219	smg7	99	62.748	Poecilia_formosa
ENSMLUG00000015417	SMG7	99	60.515	ENSPLAG00000001446	smg7	99	60.432	Poecilia_latipinna
ENSMLUG00000015417	SMG7	96	59.966	ENSPMEG00000005218	smg7	99	59.880	Poecilia_mexicana
ENSMLUG00000015417	SMG7	87	60.038	ENSPREG00000019039	smg7	91	60.265	Poecilia_reticulata
ENSMLUG00000015417	SMG7	99	88.974	ENSPPYG00000000427	SMG7	99	88.974	Pongo_abelii
ENSMLUG00000015417	SMG7	95	84.779	ENSPCAG00000008360	SMG7	94	84.779	Procavia_capensis
ENSMLUG00000015417	SMG7	99	96.734	ENSPCOG00000011996	SMG7	97	96.734	Propithecus_coquereli
ENSMLUG00000015417	SMG7	91	91.827	ENSPVAG00000000851	SMG7	89	91.827	Pteropus_vampyrus
ENSMLUG00000015417	SMG7	99	64.262	ENSPNYG00000007643	smg7	99	64.179	Pundamilia_nyererei
ENSMLUG00000015417	SMG7	99	66.472	ENSPNAG00000011374	smg7	98	68.182	Pygocentrus_nattereri
ENSMLUG00000015417	SMG7	99	94.885	ENSRNOG00000027962	Smg7	100	95.635	Rattus_norvegicus
ENSMLUG00000015417	SMG7	99	96.734	ENSRBIG00000036316	SMG7	97	96.734	Rhinopithecus_bieti
ENSMLUG00000015417	SMG7	99	96.734	ENSRROG00000035719	SMG7	99	96.734	Rhinopithecus_roxellana
ENSMLUG00000015417	SMG7	99	96.558	ENSSBOG00000023454	SMG7	99	96.558	Saimiri_boliviensis_boliviensis
ENSMLUG00000015417	SMG7	100	85.198	ENSSHAG00000013147	SMG7	100	84.945	Sarcophilus_harrisii
ENSMLUG00000015417	SMG7	99	66.807	ENSSFOG00015017252	smg7	99	74.737	Scleropages_formosus
ENSMLUG00000015417	SMG7	99	64.363	ENSSMAG00000006067	smg7	99	64.339	Scophthalmus_maximus
ENSMLUG00000015417	SMG7	96	71.154	ENSSDUG00000017543	smg7	100	61.437	Seriola_dumerili
ENSMLUG00000015417	SMG7	99	82.403	ENSSPUG00000002064	SMG7	99	82.234	Sphenodon_punctatus
ENSMLUG00000015417	SMG7	99	61.264	ENSSPAG00000008733	smg7	99	61.047	Stegastes_partitus
ENSMLUG00000015417	SMG7	99	97.352	ENSSSCG00000015558	SMG7	99	97.352	Sus_scrofa
ENSMLUG00000015417	SMG7	99	81.519	ENSTGUG00000003928	SMG7	100	81.435	Taeniopygia_guttata
ENSMLUG00000015417	SMG7	99	63.636	ENSTNIG00000002802	smg7	99	63.429	Tetraodon_nigroviridis
ENSMLUG00000015417	SMG7	77	94.068	ENSTBEG00000003220	SMG7	75	94.068	Tupaia_belangeri
ENSMLUG00000015417	SMG7	96	97.352	ENSTTRG00000014778	SMG7	94	97.352	Tursiops_truncatus
ENSMLUG00000015417	SMG7	96	92.903	ENSUAMG00000017473	SMG7	100	92.903	Ursus_americanus
ENSMLUG00000015417	SMG7	96	97.361	ENSUMAG00000016389	SMG7	100	97.361	Ursus_maritimus
ENSMLUG00000015417	SMG7	99	97.176	ENSVVUG00000008976	SMG7	99	97.213	Vulpes_vulpes
ENSMLUG00000015417	SMG7	100	65.480	ENSXETG00000012528	smg7	100	65.503	Xenopus_tropicalis
ENSMLUG00000015417	SMG7	99	60.634	ENSXMAG00000007123	smg7	99	60.801	Xiphophorus_maculatus