EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000015723 (Gene tree)
Gene ID: 102442108
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 73128 bases
Position: chrGL430298:206565-279692
Accession: 102442108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000014337	RNA_pol_Rpb1_5	PF04998.17	1.2e-103	1	1
ENSMLUP00000014337	RNA_pol_Rpb1_4	PF05000.17	1e-25	1	1
ENSMLUP00000014337	RNA_pol_Rpb1_2	PF00623.20	1.4e-70	1	1
ENSMLUP00000014337	RNA_pol_Rpb1_3	PF04983.18	3e-36	1	1
ENSMLUP00000014337	RNA_pol_Rpb1_1	PF04997.12	1.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000015739	POLR1A-201	5184	XM_006104003	ENSMLUP00000014337	1727 (aa)	XP_006104065	G1PT10

Gene Model

Click here to download ENSMLUG00000015723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000015723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000015723	POLR1A	62	38.806	ENSMLUG00000009088	-	53	38.806
ENSMLUG00000015723	POLR1A	55	35.747	ENSMLUG00000011522	POLR3A	65	35.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000015723	POLR1A	97	96.410	ENSG00000068654	POLR1A	100	89.589	Homo_sapiens
ENSMLUG00000015723	POLR1A	69	67.586	ENSAPOG00000017945	polr1a	99	67.586	Acanthochromis_polyacanthus
ENSMLUG00000015723	POLR1A	100	90.735	ENSAMEG00000005807	POLR1A	100	93.558	Ailuropoda_melanoleuca
ENSMLUG00000015723	POLR1A	96	67.744	ENSACIG00000022147	polr1a	100	67.263	Amphilophus_citrinellus
ENSMLUG00000015723	POLR1A	100	66.263	ENSAOCG00000017336	polr1a	100	67.840	Amphiprion_ocellaris
ENSMLUG00000015723	POLR1A	94	73.611	ENSAPEG00000016105	polr1a	98	73.611	Amphiprion_percula
ENSMLUG00000015723	POLR1A	100	66.609	ENSATEG00000016773	polr1a	100	65.957	Anabas_testudineus
ENSMLUG00000015723	POLR1A	85	72.297	ENSAPLG00000013871	POLR1A	99	71.922	Anas_platyrhynchos
ENSMLUG00000015723	POLR1A	99	69.151	ENSACAG00000012141	POLR1A	99	68.573	Anolis_carolinensis
ENSMLUG00000015723	POLR1A	100	88.368	ENSANAG00000033927	POLR1A	100	88.600	Aotus_nancymaae
ENSMLUG00000015723	POLR1A	100	62.651	ENSACLG00000020541	polr1a	100	62.190	Astatotilapia_calliptera
ENSMLUG00000015723	POLR1A	100	88.722	ENSBTAG00000006481	POLR1A	100	88.780	Bos_taurus
ENSMLUG00000015723	POLR1A	99	38.697	WBGene00012999	rpoa-1	98	38.652	Caenorhabditis_elegans
ENSMLUG00000015723	POLR1A	100	88.099	ENSCJAG00000019547	POLR1A	100	88.446	Callithrix_jacchus
ENSMLUG00000015723	POLR1A	100	90.562	ENSCAFG00000007613	POLR1A	100	90.562	Canis_familiaris
ENSMLUG00000015723	POLR1A	100	90.677	ENSCAFG00020014752	POLR1A	100	90.677	Canis_lupus_dingo
ENSMLUG00000015723	POLR1A	100	88.188	ENSCHIG00000018204	POLR1A	100	87.898	Capra_hircus
ENSMLUG00000015723	POLR1A	100	86.458	ENSTSYG00000002761	POLR1A	100	86.343	Carlito_syrichta
ENSMLUG00000015723	POLR1A	97	83.175	ENSCAPG00000010132	POLR1A	100	83.085	Cavia_aperea
ENSMLUG00000015723	POLR1A	100	87.666	ENSCPOG00000012350	POLR1A	100	87.666	Cavia_porcellus
ENSMLUG00000015723	POLR1A	100	88.504	ENSCCAG00000019839	POLR1A	100	88.850	Cebus_capucinus
ENSMLUG00000015723	POLR1A	100	89.705	ENSCATG00000029786	POLR1A	100	90.052	Cercocebus_atys
ENSMLUG00000015723	POLR1A	100	87.384	ENSCLAG00000005187	POLR1A	100	87.326	Chinchilla_lanigera
ENSMLUG00000015723	POLR1A	100	89.647	ENSCSAG00000016251	POLR1A	100	89.994	Chlorocebus_sabaeus
ENSMLUG00000015723	POLR1A	99	74.812	ENSCPBG00000001115	POLR1A	99	74.754	Chrysemys_picta_bellii
ENSMLUG00000015723	POLR1A	99	47.052	ENSCSAVG00000007184	-	91	55.335	Ciona_savignyi
ENSMLUG00000015723	POLR1A	100	86.647	ENSCANG00000031785	POLR1A	100	86.647	Colobus_angolensis_palliatus
ENSMLUG00000015723	POLR1A	100	82.687	ENSCGRG00001006651	Polr1a	100	82.687	Cricetulus_griseus_chok1gshd
ENSMLUG00000015723	POLR1A	60	86.434	ENSCGRG00000010834	Polr1a	100	86.434	Cricetulus_griseus_crigri
ENSMLUG00000015723	POLR1A	100	61.875	ENSCSEG00000020190	polr1a	100	61.800	Cynoglossus_semilaevis
ENSMLUG00000015723	POLR1A	100	64.723	ENSCVAG00000020941	polr1a	100	64.524	Cyprinodon_variegatus
ENSMLUG00000015723	POLR1A	100	67.376	ENSDARG00000098375	polr1a	100	67.376	Danio_rerio
ENSMLUG00000015723	POLR1A	100	82.054	ENSDNOG00000010829	POLR1A	100	82.023	Dasypus_novemcinctus
ENSMLUG00000015723	POLR1A	100	87.197	ENSDORG00000008298	Polr1a	100	86.794	Dipodomys_ordii
ENSMLUG00000015723	POLR1A	80	43.911	FBgn0019938	RpI1	99	42.981	Drosophila_melanogaster
ENSMLUG00000015723	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSMLUG00000015723	POLR1A	88	66.667	ENSEBUG00000005667	-	99	47.714	Eptatretus_burgeri
ENSMLUG00000015723	POLR1A	100	90.804	ENSEASG00005001625	POLR1A	100	91.151	Equus_asinus_asinus
ENSMLUG00000015723	POLR1A	100	90.804	ENSECAG00000010092	POLR1A	100	92.688	Equus_caballus
ENSMLUG00000015723	POLR1A	100	90.804	ENSECAG00000036306	-	100	92.688	Equus_caballus
ENSMLUG00000015723	POLR1A	100	90.804	ENSECAG00000030510	-	100	92.688	Equus_caballus
ENSMLUG00000015723	POLR1A	85	96.809	ENSEEUG00000000676	POLR1A	85	96.667	Erinaceus_europaeus
ENSMLUG00000015723	POLR1A	100	66.802	ENSELUG00000012769	polr1a	99	66.416	Esox_lucius
ENSMLUG00000015723	POLR1A	100	90.851	ENSFCAG00000008966	POLR1A	100	90.851	Felis_catus
ENSMLUG00000015723	POLR1A	99	71.170	ENSFALG00000010082	POLR1A	99	70.887	Ficedula_albicollis
ENSMLUG00000015723	POLR1A	100	87.442	ENSFDAG00000013726	POLR1A	100	87.269	Fukomys_damarensis
ENSMLUG00000015723	POLR1A	100	62.067	ENSFHEG00000005996	polr1a	100	61.778	Fundulus_heteroclitus
ENSMLUG00000015723	POLR1A	100	59.931	ENSGMOG00000002230	polr1a	100	59.550	Gadus_morhua
ENSMLUG00000015723	POLR1A	90	69.674	ENSGALG00000038160	-	99	69.221	Gallus_gallus
ENSMLUG00000015723	POLR1A	100	64.818	ENSGAFG00000015266	polr1a	100	64.007	Gambusia_affinis
ENSMLUG00000015723	POLR1A	100	65.000	ENSGACG00000018791	polr1a	100	65.092	Gasterosteus_aculeatus
ENSMLUG00000015723	POLR1A	90	75.355	ENSGAGG00000004984	-	96	81.477	Gopherus_agassizii
ENSMLUG00000015723	POLR1A	100	89.184	ENSGGOG00000001788	POLR1A	100	89.532	Gorilla_gorilla
ENSMLUG00000015723	POLR1A	90	64.399	ENSHBUG00000020021	polr1a	99	64.399	Haplochromis_burtoni
ENSMLUG00000015723	POLR1A	100	87.956	ENSHGLG00000006334	POLR1A	100	87.905	Heterocephalus_glaber_female
ENSMLUG00000015723	POLR1A	100	87.702	ENSHGLG00100006614	POLR1A	100	87.651	Heterocephalus_glaber_male
ENSMLUG00000015723	POLR1A	100	62.299	ENSHCOG00000003345	polr1a	100	62.406	Hippocampus_comes
ENSMLUG00000015723	POLR1A	100	65.726	ENSIPUG00000013174	polr1a	100	65.247	Ictalurus_punctatus
ENSMLUG00000015723	POLR1A	100	85.871	ENSSTOG00000012580	POLR1A	100	85.756	Ictidomys_tridecemlineatus
ENSMLUG00000015723	POLR1A	100	86.524	ENSJJAG00000013113	Polr1a	100	86.524	Jaculus_jaculus
ENSMLUG00000015723	POLR1A	100	65.780	ENSKMAG00000007399	polr1a	100	65.260	Kryptolebias_marmoratus
ENSMLUG00000015723	POLR1A	94	68.185	ENSLBEG00000015401	polr1a	99	68.531	Labrus_bergylta
ENSMLUG00000015723	POLR1A	53	76.273	ENSLACG00000003218	polr1a	100	76.273	Latimeria_chalumnae
ENSMLUG00000015723	POLR1A	100	70.761	ENSLOCG00000010881	polr1a	100	70.052	Lepisosteus_oculatus
ENSMLUG00000015723	POLR1A	100	88.273	ENSLAFG00000014948	POLR1A	100	88.619	Loxodonta_africana
ENSMLUG00000015723	POLR1A	100	89.647	ENSMFAG00000046097	POLR1A	100	89.994	Macaca_fascicularis
ENSMLUG00000015723	POLR1A	100	89.532	ENSMMUG00000015815	POLR1A	100	89.879	Macaca_mulatta
ENSMLUG00000015723	POLR1A	100	89.647	ENSMNEG00000043313	POLR1A	100	89.994	Macaca_nemestrina
ENSMLUG00000015723	POLR1A	100	89.127	ENSMLEG00000042428	POLR1A	100	89.474	Mandrillus_leucophaeus
ENSMLUG00000015723	POLR1A	100	66.263	ENSMAMG00000016565	polr1a	100	65.440	Mastacembelus_armatus
ENSMLUG00000015723	POLR1A	100	65.994	ENSMZEG00005004915	polr1a	100	65.648	Maylandia_zebra
ENSMLUG00000015723	POLR1A	99	69.391	ENSMGAG00000013111	POLR1A	99	69.155	Meleagris_gallopavo
ENSMLUG00000015723	POLR1A	92	86.987	ENSMAUG00000008497	Polr1a	100	86.797	Mesocricetus_auratus
ENSMLUG00000015723	POLR1A	100	89.191	ENSMICG00000000757	POLR1A	100	89.017	Microcebus_murinus
ENSMLUG00000015723	POLR1A	100	87.203	ENSMOCG00000000122	Polr1a	100	86.914	Microtus_ochrogaster
ENSMLUG00000015723	POLR1A	100	65.087	ENSMMOG00000010216	polr1a	100	64.934	Mola_mola
ENSMLUG00000015723	POLR1A	100	74.899	ENSMODG00000009335	POLR1A	100	74.555	Monodelphis_domestica
ENSMLUG00000015723	POLR1A	100	65.551	ENSMALG00000013363	polr1a	100	65.263	Monopterus_albus
ENSMLUG00000015723	POLR1A	100	85.350	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.177	Mus_caroli
ENSMLUG00000015723	POLR1A	100	85.640	ENSMUSG00000049553	Polr1a	100	85.466	Mus_musculus
ENSMLUG00000015723	POLR1A	100	86.450	MGP_PahariEiJ_G0022230	Polr1a	100	86.277	Mus_pahari
ENSMLUG00000015723	POLR1A	100	84.817	MGP_SPRETEiJ_G0029499	Polr1a	100	84.475	Mus_spretus
ENSMLUG00000015723	POLR1A	100	90.562	ENSMPUG00000009135	POLR1A	100	90.562	Mustela_putorius_furo
ENSMLUG00000015723	POLR1A	100	87.847	ENSNGAG00000017907	Polr1a	100	87.500	Nannospalax_galili
ENSMLUG00000015723	POLR1A	100	65.897	ENSNBRG00000000519	polr1a	100	65.666	Neolamprologus_brichardi
ENSMLUG00000015723	POLR1A	100	87.507	ENSNLEG00000002264	POLR1A	100	87.680	Nomascus_leucogenys
ENSMLUG00000015723	POLR1A	75	94.488	ENSMEUG00000011665	-	75	94.488	Notamacropus_eugenii
ENSMLUG00000015723	POLR1A	99	82.084	ENSOPRG00000008269	POLR1A	100	81.967	Ochotona_princeps
ENSMLUG00000015723	POLR1A	100	87.674	ENSODEG00000003542	POLR1A	100	87.442	Octodon_degus
ENSMLUG00000015723	POLR1A	100	65.917	ENSONIG00000015895	polr1a	100	65.859	Oreochromis_niloticus
ENSMLUG00000015723	POLR1A	100	88.844	ENSOCUG00000010138	POLR1A	100	89.017	Oryctolagus_cuniculus
ENSMLUG00000015723	POLR1A	100	65.115	ENSORLG00000008753	polr1a	99	64.824	Oryzias_latipes
ENSMLUG00000015723	POLR1A	100	63.678	ENSORLG00020020726	polr1a	99	62.929	Oryzias_latipes_hni
ENSMLUG00000015723	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSMLUG00000015723	POLR1A	100	88.606	ENSOGAG00000004031	POLR1A	100	88.664	Otolemur_garnettii
ENSMLUG00000015723	POLR1A	100	89.184	ENSOARG00000020601	POLR1A	100	89.249	Ovis_aries
ENSMLUG00000015723	POLR1A	100	89.184	ENSPPAG00000042450	POLR1A	100	89.532	Pan_paniscus
ENSMLUG00000015723	POLR1A	100	90.967	ENSPPRG00000006702	POLR1A	100	90.967	Panthera_pardus
ENSMLUG00000015723	POLR1A	100	90.421	ENSPTIG00000018783	POLR1A	100	90.421	Panthera_tigris_altaica
ENSMLUG00000015723	POLR1A	100	89.242	ENSPTRG00000012147	POLR1A	100	89.532	Pan_troglodytes
ENSMLUG00000015723	POLR1A	100	89.589	ENSPANG00000025908	POLR1A	100	89.936	Papio_anubis
ENSMLUG00000015723	POLR1A	94	76.389	ENSPKIG00000005468	polr1a	99	76.389	Paramormyrops_kingsleyae
ENSMLUG00000015723	POLR1A	63	71.823	ENSPSIG00000009321	-	99	71.823	Pelodiscus_sinensis
ENSMLUG00000015723	POLR1A	55	67.585	ENSPMGG00000009718	polr1a	95	67.585	Periophthalmus_magnuspinnatus
ENSMLUG00000015723	POLR1A	100	87.551	ENSPEMG00000022224	Polr1a	100	87.261	Peromyscus_maniculatus_bairdii
ENSMLUG00000015723	POLR1A	95	78.667	ENSPCIG00000004222	POLR1A	99	78.689	Phascolarctos_cinereus
ENSMLUG00000015723	POLR1A	100	65.283	ENSPFOG00000005025	polr1a	100	64.642	Poecilia_formosa
ENSMLUG00000015723	POLR1A	100	65.320	ENSPLAG00000021389	polr1a	100	64.760	Poecilia_latipinna
ENSMLUG00000015723	POLR1A	100	63.762	ENSPMEG00000006463	polr1a	100	63.020	Poecilia_mexicana
ENSMLUG00000015723	POLR1A	100	65.551	ENSPREG00000002389	polr1a	100	64.669	Poecilia_reticulata
ENSMLUG00000015723	POLR1A	100	88.664	ENSPPYG00000012217	POLR1A	100	89.011	Pongo_abelii
ENSMLUG00000015723	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	92	100.000	Procavia_capensis
ENSMLUG00000015723	POLR1A	100	88.902	ENSPCOG00000026987	POLR1A	100	89.075	Propithecus_coquereli
ENSMLUG00000015723	POLR1A	95	89.247	ENSPVAG00000012674	POLR1A	95	88.699	Pteropus_vampyrus
ENSMLUG00000015723	POLR1A	100	65.994	ENSPNYG00000000026	polr1a	100	65.648	Pundamilia_nyererei
ENSMLUG00000015723	POLR1A	100	66.878	ENSPNAG00000019223	polr1a	100	66.590	Pygocentrus_nattereri
ENSMLUG00000015723	POLR1A	100	87.203	ENSRNOG00000009545	Polr1a	100	87.030	Rattus_norvegicus
ENSMLUG00000015723	POLR1A	100	88.837	ENSRBIG00000028335	POLR1A	100	89.184	Rhinopithecus_bieti
ENSMLUG00000015723	POLR1A	100	88.780	ENSRROG00000031473	POLR1A	100	89.127	Rhinopithecus_roxellana
ENSMLUG00000015723	POLR1A	99	37.226	YOR341W	RPA190	99	37.199	Saccharomyces_cerevisiae
ENSMLUG00000015723	POLR1A	100	88.042	ENSSBOG00000030262	POLR1A	100	88.388	Saimiri_boliviensis_boliviensis
ENSMLUG00000015723	POLR1A	100	73.172	ENSSHAG00000014739	POLR1A	100	73.387	Sarcophilus_harrisii
ENSMLUG00000015723	POLR1A	100	68.208	ENSSFOG00015019716	polr1a	100	67.553	Scleropages_formosus
ENSMLUG00000015723	POLR1A	100	65.549	ENSSMAG00000014342	polr1a	100	65.260	Scophthalmus_maximus
ENSMLUG00000015723	POLR1A	100	66.858	ENSSDUG00000014631	polr1a	100	66.399	Seriola_dumerili
ENSMLUG00000015723	POLR1A	100	64.963	ENSSLDG00000024095	polr1a	100	64.503	Seriola_lalandi_dorsalis
ENSMLUG00000015723	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSMLUG00000015723	POLR1A	94	80.000	ENSSPUG00000004215	POLR1A	98	80.000	Sphenodon_punctatus
ENSMLUG00000015723	POLR1A	65	70.901	ENSSPAG00000016341	polr1a	95	70.901	Stegastes_partitus
ENSMLUG00000015723	POLR1A	83	90.098	ENSSSCG00000008226	POLR1A	99	90.070	Sus_scrofa
ENSMLUG00000015723	POLR1A	99	70.106	ENSTGUG00000010704	POLR1A	100	69.672	Taeniopygia_guttata
ENSMLUG00000015723	POLR1A	100	63.043	ENSTRUG00000002210	polr1a	99	63.358	Takifugu_rubripes
ENSMLUG00000015723	POLR1A	100	59.965	ENSTNIG00000010116	polr1a	100	59.850	Tetraodon_nigroviridis
ENSMLUG00000015723	POLR1A	74	95.133	ENSTBEG00000008646	POLR1A	74	95.133	Tupaia_belangeri
ENSMLUG00000015723	POLR1A	100	85.756	ENSTTRG00000008597	POLR1A	100	86.103	Tursiops_truncatus
ENSMLUG00000015723	POLR1A	68	91.109	ENSUAMG00000012158	-	94	91.109	Ursus_americanus
ENSMLUG00000015723	POLR1A	100	90.504	ENSUMAG00000006700	POLR1A	100	90.504	Ursus_maritimus
ENSMLUG00000015723	POLR1A	100	90.446	ENSVVUG00000001245	POLR1A	100	90.446	Vulpes_vulpes
ENSMLUG00000015723	POLR1A	100	67.931	ENSXETG00000001952	polr1a	100	68.876	Xenopus_tropicalis
ENSMLUG00000015723	POLR1A	100	65.418	ENSXMAG00000004032	polr1a	100	64.629	Xiphophorus_maculatus