EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000015930 (Gene tree)
Gene ID: -
Gene Symbol: LSM11
Alias: FLJ38273
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 3148 bases
Position: chrGL429823:2076216-2079363
Accession: 30860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000018438	LSM	PF01423.22	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000029717	LSM11-202	534	XM_006109972	ENSMLUP00000018438	177 (aa)	-	G1Q405
ENSMLUT00000015938	LSM11-201	654	-	ENSMLUP00000014518	217 (aa)	-	G1PTG6

Gene Model

Click here to download ENSMLUG00000015930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000015930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000015930	LSM11	95	71.905	ENSCAPG00000009739	LSM11	100	71.905	Cavia_aperea
ENSMLUG00000015930	LSM11	97	70.892	ENSCPOG00000000906	LSM11	100	70.892	Cavia_porcellus
ENSMLUG00000015930	LSM11	100	72.018	ENSCLAG00000017067	LSM11	94	72.018	Chinchilla_lanigera
ENSMLUG00000015930	LSM11	95	71.905	ENSCHOG00000010946	LSM11	100	71.905	Choloepus_hoffmanni
ENSMLUG00000015930	LSM11	95	73.333	ENSCANG00000040781	LSM11	100	73.333	Colobus_angolensis_palliatus
ENSMLUG00000015930	LSM11	98	73.953	ENSCGRG00000000197	Lsm11	97	73.953	Cricetulus_griseus_crigri
ENSMLUG00000015930	LSM11	98	45.143	ENSCSEG00000019951	lsm11	53	45.143	Cynoglossus_semilaevis
ENSMLUG00000015930	LSM11	98	45.902	ENSCVAG00000011703	lsm11	52	45.902	Cyprinodon_variegatus
ENSMLUG00000015930	LSM11	95	71.905	ENSEEUG00000010814	LSM11	100	71.905	Erinaceus_europaeus
ENSMLUG00000015930	LSM11	95	73.810	ENSMLEG00000027420	LSM11	100	73.810	Mandrillus_leucophaeus
ENSMLUG00000015930	LSM11	99	44.751	ENSMMOG00000009365	lsm11	52	44.751	Mola_mola
ENSMLUG00000015930	LSM11	96	72.986	ENSOGAG00000009059	LSM11	100	72.986	Otolemur_garnettii
ENSMLUG00000015930	LSM11	96	60.000	ENSPSIG00000005234	LSM11	100	60.000	Pelodiscus_sinensis
ENSMLUG00000015930	LSM11	98	47.126	ENSPMGG00000020709	lsm11	52	47.126	Periophthalmus_magnuspinnatus
ENSMLUG00000015930	LSM11	98	46.286	ENSPFOG00000000512	lsm11	52	46.286	Poecilia_formosa
ENSMLUG00000015930	LSM11	98	46.286	ENSPLAG00000019434	lsm11	53	46.286	Poecilia_latipinna
ENSMLUG00000015930	LSM11	97	70.423	ENSPCAG00000016360	LSM11	100	70.423	Procavia_capensis
ENSMLUG00000015930	LSM11	95	73.333	ENSTBEG00000000992	LSM11	100	73.333	Tupaia_belangeri
ENSMLUG00000015930	LSM11	98	47.159	ENSXMAG00000008238	lsm11	53	47.159	Xiphophorus_maculatus