EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000016071 (Gene tree)
Gene ID: 102425616
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 49708 bases
Position: chrGL430273:482181-531888
Accession: 102425616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000014640	DND1_DSRM	PF14709.7	2.9e-25	1	1
ENSMLUP00000014640	RRM_1	PF00076.22	1.1e-40	1	3
ENSMLUP00000014640	RRM_1	PF00076.22	1.1e-40	2	3
ENSMLUP00000014640	RRM_1	PF00076.22	1.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000016071	A1CF-201	1785	XM_006103768	ENSMLUP00000014640	594 (aa)	XP_006103830	G1PTS0

Gene Model

Click here to download ENSMLUG00000016071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000016071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000016071	A1CF	73	71.761	ENSMLUG00000003221	RBM46	75	71.761
ENSMLUG00000016071	A1CF	74	58.652	ENSMLUG00000000889	RBM47	72	58.652
ENSMLUG00000016071	A1CF	52	51.911	ENSMLUG00000007582	HNRNPR	50	51.582
ENSMLUG00000016071	A1CF	52	51.780	ENSMLUG00000006919	SYNCRIP	63	44.608

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000016071	A1CF	100	94.454	ENSG00000148584	A1CF	100	98.507	Homo_sapiens
ENSMLUG00000016071	A1CF	100	73.466	ENSAPOG00000008259	a1cf	100	72.848	Acanthochromis_polyacanthus
ENSMLUG00000016071	A1CF	100	94.790	ENSAMEG00000000523	A1CF	100	94.790	Ailuropoda_melanoleuca
ENSMLUG00000016071	A1CF	100	75.693	ENSACIG00000008632	a1cf	100	76.509	Amphilophus_citrinellus
ENSMLUG00000016071	A1CF	100	74.141	ENSAOCG00000023744	a1cf	96	84.058	Amphiprion_ocellaris
ENSMLUG00000016071	A1CF	100	75.123	ENSAPEG00000009537	a1cf	100	75.327	Amphiprion_percula
ENSMLUG00000016071	A1CF	100	75.896	ENSATEG00000013720	a1cf	100	76.998	Anabas_testudineus
ENSMLUG00000016071	A1CF	100	87.416	ENSAPLG00000002964	A1CF	100	87.081	Anas_platyrhynchos
ENSMLUG00000016071	A1CF	100	82.886	ENSACAG00000015269	A1CF	100	82.047	Anolis_carolinensis
ENSMLUG00000016071	A1CF	100	93.277	ENSANAG00000019974	A1CF	100	93.277	Aotus_nancymaae
ENSMLUG00000016071	A1CF	100	73.529	ENSACLG00000017428	a1cf	100	74.837	Astatotilapia_calliptera
ENSMLUG00000016071	A1CF	100	74.380	ENSAMXG00000018180	a1cf	100	74.215	Astyanax_mexicanus
ENSMLUG00000016071	A1CF	100	94.118	ENSBTAG00000021195	A1CF	100	94.118	Bos_taurus
ENSMLUG00000016071	A1CF	100	94.958	ENSCJAG00000005045	A1CF	100	94.958	Callithrix_jacchus
ENSMLUG00000016071	A1CF	100	94.454	ENSCAFG00000015581	A1CF	100	94.118	Canis_familiaris
ENSMLUG00000016071	A1CF	100	94.454	ENSCAFG00020026421	A1CF	100	94.118	Canis_lupus_dingo
ENSMLUG00000016071	A1CF	100	94.622	ENSCHIG00000020411	A1CF	100	94.622	Capra_hircus
ENSMLUG00000016071	A1CF	95	93.085	ENSTSYG00000001755	A1CF	100	92.527	Carlito_syrichta
ENSMLUG00000016071	A1CF	100	81.902	ENSCAPG00000017386	A1CF	100	81.902	Cavia_aperea
ENSMLUG00000016071	A1CF	100	93.950	ENSCPOG00000009807	A1CF	100	93.950	Cavia_porcellus
ENSMLUG00000016071	A1CF	100	94.790	ENSCCAG00000018168	A1CF	100	94.622	Cebus_capucinus
ENSMLUG00000016071	A1CF	100	92.605	ENSCATG00000043715	A1CF	100	92.605	Cercocebus_atys
ENSMLUG00000016071	A1CF	100	93.624	ENSCLAG00000010424	A1CF	100	93.624	Chinchilla_lanigera
ENSMLUG00000016071	A1CF	100	93.950	ENSCSAG00000007032	A1CF	100	93.950	Chlorocebus_sabaeus
ENSMLUG00000016071	A1CF	98	89.492	ENSCHOG00000009089	A1CF	98	88.814	Choloepus_hoffmanni
ENSMLUG00000016071	A1CF	100	87.416	ENSCPBG00000026464	A1CF	100	87.081	Chrysemys_picta_bellii
ENSMLUG00000016071	A1CF	100	94.118	ENSCANG00000038032	A1CF	100	94.118	Colobus_angolensis_palliatus
ENSMLUG00000016071	A1CF	100	93.277	ENSCGRG00001017413	A1cf	100	93.277	Cricetulus_griseus_chok1gshd
ENSMLUG00000016071	A1CF	100	92.773	ENSCGRG00000017332	A1cf	100	92.773	Cricetulus_griseus_crigri
ENSMLUG00000016071	A1CF	100	75.124	ENSCSEG00000002361	a1cf	100	75.622	Cynoglossus_semilaevis
ENSMLUG00000016071	A1CF	100	74.756	ENSCVAG00000010520	a1cf	100	75.693	Cyprinodon_variegatus
ENSMLUG00000016071	A1CF	100	77.870	ENSDARG00000002968	a1cf	100	78.203	Danio_rerio
ENSMLUG00000016071	A1CF	100	93.782	ENSDNOG00000002829	A1CF	100	93.782	Dasypus_novemcinctus
ENSMLUG00000016071	A1CF	81	92.391	ENSETEG00000012527	A1CF	81	92.391	Echinops_telfairi
ENSMLUG00000016071	A1CF	100	96.482	ENSEASG00005012924	A1CF	100	96.482	Equus_asinus_asinus
ENSMLUG00000016071	A1CF	100	96.147	ENSECAG00000010424	A1CF	100	96.147	Equus_caballus
ENSMLUG00000016071	A1CF	78	80.728	ENSEEUG00000000013	A1CF	97	81.333	Erinaceus_europaeus
ENSMLUG00000016071	A1CF	100	78.037	ENSELUG00000003159	a1cf	100	78.869	Esox_lucius
ENSMLUG00000016071	A1CF	100	92.101	ENSFCAG00000011179	A1CF	100	92.101	Felis_catus
ENSMLUG00000016071	A1CF	100	85.738	ENSFALG00000013183	A1CF	100	85.403	Ficedula_albicollis
ENSMLUG00000016071	A1CF	100	92.101	ENSFDAG00000019371	A1CF	100	92.101	Fukomys_damarensis
ENSMLUG00000016071	A1CF	100	70.033	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSMLUG00000016071	A1CF	100	71.782	ENSGMOG00000018943	a1cf	100	70.792	Gadus_morhua
ENSMLUG00000016071	A1CF	95	87.080	ENSGALG00000003765	A1CF	97	86.726	Gallus_gallus
ENSMLUG00000016071	A1CF	100	70.164	ENSGAFG00000014868	a1cf	100	71.311	Gambusia_affinis
ENSMLUG00000016071	A1CF	100	74.056	ENSGACG00000010241	a1cf	100	74.262	Gasterosteus_aculeatus
ENSMLUG00000016071	A1CF	94	87.567	ENSGAGG00000016508	A1CF	97	87.211	Gopherus_agassizii
ENSMLUG00000016071	A1CF	100	94.622	ENSGGOG00000009670	A1CF	100	94.622	Gorilla_gorilla
ENSMLUG00000016071	A1CF	100	74.715	ENSHBUG00000021959	a1cf	100	76.260	Haplochromis_burtoni
ENSMLUG00000016071	A1CF	100	93.950	ENSHGLG00000008955	A1CF	100	93.950	Heterocephalus_glaber_female
ENSMLUG00000016071	A1CF	100	93.277	ENSHGLG00100000518	A1CF	100	93.277	Heterocephalus_glaber_male
ENSMLUG00000016071	A1CF	100	69.593	ENSHCOG00000017669	a1cf	100	72.195	Hippocampus_comes
ENSMLUG00000016071	A1CF	89	82.739	ENSIPUG00000010367	a1cf	95	82.739	Ictalurus_punctatus
ENSMLUG00000016071	A1CF	100	77.073	ENSKMAG00000006568	a1cf	100	77.236	Kryptolebias_marmoratus
ENSMLUG00000016071	A1CF	99	75.369	ENSLBEG00000020994	a1cf	98	76.847	Labrus_bergylta
ENSMLUG00000016071	A1CF	100	81.302	ENSLACG00000008061	A1CF	100	81.135	Latimeria_chalumnae
ENSMLUG00000016071	A1CF	100	81.167	ENSLOCG00000006302	a1cf	100	81.167	Lepisosteus_oculatus
ENSMLUG00000016071	A1CF	100	93.613	ENSLAFG00000015462	A1CF	100	93.613	Loxodonta_africana
ENSMLUG00000016071	A1CF	100	92.941	ENSMFAG00000035948	A1CF	100	92.941	Macaca_fascicularis
ENSMLUG00000016071	A1CF	100	92.941	ENSMMUG00000007077	A1CF	100	92.941	Macaca_mulatta
ENSMLUG00000016071	A1CF	100	92.605	ENSMNEG00000031454	A1CF	100	92.605	Macaca_nemestrina
ENSMLUG00000016071	A1CF	100	93.950	ENSMLEG00000037223	A1CF	100	93.950	Mandrillus_leucophaeus
ENSMLUG00000016071	A1CF	100	73.486	ENSMAMG00000010402	a1cf	100	75.000	Mastacembelus_armatus
ENSMLUG00000016071	A1CF	100	76.167	ENSMZEG00005013245	a1cf	100	77.333	Maylandia_zebra
ENSMLUG00000016071	A1CF	100	87.270	ENSMGAG00000001507	A1CF	100	86.935	Meleagris_gallopavo
ENSMLUG00000016071	A1CF	100	92.941	ENSMAUG00000007422	A1cf	100	92.941	Mesocricetus_auratus
ENSMLUG00000016071	A1CF	100	92.977	ENSMICG00000003377	A1CF	100	92.977	Microcebus_murinus
ENSMLUG00000016071	A1CF	100	92.941	ENSMOCG00000021536	A1cf	100	92.941	Microtus_ochrogaster
ENSMLUG00000016071	A1CF	100	67.921	ENSMMOG00000009422	a1cf	100	69.722	Mola_mola
ENSMLUG00000016071	A1CF	89	89.098	ENSMODG00000016478	A1CF	97	89.414	Monodelphis_domestica
ENSMLUG00000016071	A1CF	100	72.667	ENSMALG00000012992	a1cf	100	72.333	Monopterus_albus
ENSMLUG00000016071	A1CF	100	91.765	MGP_CAROLIEiJ_G0022873	A1cf	100	91.765	Mus_caroli
ENSMLUG00000016071	A1CF	100	91.765	ENSMUSG00000052595	A1cf	99	94.474	Mus_musculus
ENSMLUG00000016071	A1CF	100	90.924	MGP_PahariEiJ_G0014366	A1cf	100	90.924	Mus_pahari
ENSMLUG00000016071	A1CF	100	91.261	MGP_SPRETEiJ_G0023792	A1cf	100	91.261	Mus_spretus
ENSMLUG00000016071	A1CF	100	88.067	ENSMPUG00000016971	A1CF	100	88.067	Mustela_putorius_furo
ENSMLUG00000016071	A1CF	100	93.277	ENSNGAG00000015136	A1cf	100	93.277	Nannospalax_galili
ENSMLUG00000016071	A1CF	100	74.715	ENSNBRG00000001712	a1cf	100	76.098	Neolamprologus_brichardi
ENSMLUG00000016071	A1CF	100	95.294	ENSNLEG00000012028	A1CF	100	95.294	Nomascus_leucogenys
ENSMLUG00000016071	A1CF	94	87.211	ENSMEUG00000015909	A1CF	100	87.211	Notamacropus_eugenii
ENSMLUG00000016071	A1CF	88	84.000	ENSOPRG00000010667	A1CF	97	84.091	Ochotona_princeps
ENSMLUG00000016071	A1CF	100	75.367	ENSONIG00000019105	a1cf	100	76.098	Oreochromis_niloticus
ENSMLUG00000016071	A1CF	78	88.009	ENSOANG00000007360	A1CF	99	88.009	Ornithorhynchus_anatinus
ENSMLUG00000016071	A1CF	100	91.779	ENSOCUG00000011587	A1CF	100	91.946	Oryctolagus_cuniculus
ENSMLUG00000016071	A1CF	100	74.593	ENSORLG00000013342	a1cf	100	73.786	Oryzias_latipes
ENSMLUG00000016071	A1CF	100	75.693	ENSORLG00020000586	a1cf	100	75.490	Oryzias_latipes_hni
ENSMLUG00000016071	A1CF	100	75.530	ENSORLG00015018569	a1cf	100	75.654	Oryzias_latipes_hsok
ENSMLUG00000016071	A1CF	100	74.632	ENSOMEG00000013531	a1cf	100	74.141	Oryzias_melastigma
ENSMLUG00000016071	A1CF	100	92.437	ENSOGAG00000012884	A1CF	100	92.773	Otolemur_garnettii
ENSMLUG00000016071	A1CF	100	94.958	ENSOARG00000013695	A1CF	100	94.958	Ovis_aries
ENSMLUG00000016071	A1CF	97	92.548	ENSPPAG00000028115	A1CF	100	96.154	Pan_paniscus
ENSMLUG00000016071	A1CF	100	93.782	ENSPPRG00000012180	A1CF	100	93.782	Panthera_pardus
ENSMLUG00000016071	A1CF	100	93.782	ENSPTIG00000021223	A1CF	100	93.782	Panthera_tigris_altaica
ENSMLUG00000016071	A1CF	100	94.454	ENSPTRG00000002508	A1CF	100	94.454	Pan_troglodytes
ENSMLUG00000016071	A1CF	100	92.941	ENSPANG00000021988	A1CF	100	92.941	Papio_anubis
ENSMLUG00000016071	A1CF	100	79.534	ENSPKIG00000025176	a1cf	100	79.201	Paramormyrops_kingsleyae
ENSMLUG00000016071	A1CF	100	86.074	ENSPSIG00000010318	A1CF	100	85.738	Pelodiscus_sinensis
ENSMLUG00000016071	A1CF	88	71.048	ENSPMGG00000013359	a1cf	89	71.619	Periophthalmus_magnuspinnatus
ENSMLUG00000016071	A1CF	100	92.773	ENSPEMG00000015021	A1cf	100	92.773	Peromyscus_maniculatus_bairdii
ENSMLUG00000016071	A1CF	100	87.584	ENSPCIG00000002175	A1CF	100	87.584	Phascolarctos_cinereus
ENSMLUG00000016071	A1CF	100	76.059	ENSPFOG00000007437	-	100	76.948	Poecilia_formosa
ENSMLUG00000016071	A1CF	100	76.221	ENSPFOG00000006683	a1cf	100	77.110	Poecilia_formosa
ENSMLUG00000016071	A1CF	100	74.919	ENSPLAG00000000026	a1cf	100	75.812	Poecilia_latipinna
ENSMLUG00000016071	A1CF	100	74.919	ENSPLAG00000001210	-	100	75.812	Poecilia_latipinna
ENSMLUG00000016071	A1CF	100	68.627	ENSPMEG00000015529	-	100	69.608	Poecilia_mexicana
ENSMLUG00000016071	A1CF	100	67.484	ENSPMEG00000000921	a1cf	100	68.464	Poecilia_mexicana
ENSMLUG00000016071	A1CF	100	75.896	ENSPREG00000016298	a1cf	100	77.036	Poecilia_reticulata
ENSMLUG00000016071	A1CF	100	93.782	ENSPPYG00000002819	A1CF	100	93.782	Pongo_abelii
ENSMLUG00000016071	A1CF	79	72.093	ENSPCAG00000006463	A1CF	70	91.489	Procavia_capensis
ENSMLUG00000016071	A1CF	100	94.128	ENSPCOG00000024172	A1CF	100	93.960	Propithecus_coquereli
ENSMLUG00000016071	A1CF	100	76.020	ENSPNYG00000017944	a1cf	100	77.561	Pundamilia_nyererei
ENSMLUG00000016071	A1CF	100	79.305	ENSPNAG00000007704	a1cf	100	78.974	Pygocentrus_nattereri
ENSMLUG00000016071	A1CF	100	90.756	ENSRNOG00000033195	A1cf	100	90.756	Rattus_norvegicus
ENSMLUG00000016071	A1CF	100	87.605	ENSRBIG00000042892	A1CF	100	90.607	Rhinopithecus_bieti
ENSMLUG00000016071	A1CF	100	94.286	ENSRROG00000041398	A1CF	100	94.286	Rhinopithecus_roxellana
ENSMLUG00000016071	A1CF	100	94.958	ENSSBOG00000021930	A1CF	100	94.958	Saimiri_boliviensis_boliviensis
ENSMLUG00000016071	A1CF	100	88.255	ENSSHAG00000005096	A1CF	100	88.255	Sarcophilus_harrisii
ENSMLUG00000016071	A1CF	100	79.602	ENSSFOG00015011774	a1cf	100	79.104	Scleropages_formosus
ENSMLUG00000016071	A1CF	100	75.244	ENSSMAG00000013271	a1cf	100	75.081	Scophthalmus_maximus
ENSMLUG00000016071	A1CF	100	76.119	ENSSDUG00000013930	a1cf	100	76.578	Seriola_dumerili
ENSMLUG00000016071	A1CF	100	69.142	ENSSLDG00000004290	a1cf	100	69.256	Seriola_lalandi_dorsalis
ENSMLUG00000016071	A1CF	95	83.569	ENSSARG00000005940	A1CF	96	83.569	Sorex_araneus
ENSMLUG00000016071	A1CF	95	86.819	ENSSPUG00000006797	A1CF	95	86.643	Sphenodon_punctatus
ENSMLUG00000016071	A1CF	100	95.798	ENSSSCG00000010431	A1CF	100	95.798	Sus_scrofa
ENSMLUG00000016071	A1CF	100	87.458	ENSTGUG00000005090	A1CF	100	86.957	Taeniopygia_guttata
ENSMLUG00000016071	A1CF	100	74.878	ENSTRUG00000001982	a1cf	100	74.388	Takifugu_rubripes
ENSMLUG00000016071	A1CF	100	75.447	ENSTNIG00000003580	a1cf	100	75.285	Tetraodon_nigroviridis
ENSMLUG00000016071	A1CF	97	87.002	ENSTTRG00000013190	A1CF	95	87.002	Tursiops_truncatus
ENSMLUG00000016071	A1CF	100	93.613	ENSUAMG00000020065	A1CF	100	93.445	Ursus_americanus
ENSMLUG00000016071	A1CF	100	94.454	ENSUMAG00000011162	A1CF	100	94.454	Ursus_maritimus
ENSMLUG00000016071	A1CF	87	88.676	ENSVPAG00000006130	A1CF	86	88.484	Vicugna_pacos
ENSMLUG00000016071	A1CF	100	92.773	ENSVVUG00000002504	A1CF	100	92.605	Vulpes_vulpes
ENSMLUG00000016071	A1CF	100	77.333	ENSXETG00000006611	a1cf	100	77.000	Xenopus_tropicalis
ENSMLUG00000016071	A1CF	100	75.902	ENSXCOG00000003302	a1cf	100	76.393	Xiphophorus_couchianus
ENSMLUG00000016071	A1CF	100	77.049	ENSXMAG00000016703	a1cf	100	77.541	Xiphophorus_maculatus