EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000016247 (Gene tree)
Gene ID: 102423046
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 168206 bases
Position: chrGL429783:13495576-13663781
Accession: 102423046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000014820	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000016264	CHD6-201	8270	XM_006085184	ENSMLUP00000014820	2719 (aa)	XP_006085246	G1PU72

Gene Model

Click here to download ENSMLUG00000016247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000016247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000016247	CHD6	62	61.317	ENSMLUG00000001878	CHD8	60	62.866
ENSMLUG00000016247	CHD6	75	64.552	ENSMLUG00000015266	CHD7	73	61.724
ENSMLUG00000016247	CHD6	79	62.012	ENSMLUG00000004456	CHD9	68	65.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000016247	CHD6	100	91.363	ENSG00000124177	CHD6	99	99.320	Homo_sapiens
ENSMLUG00000016247	CHD6	75	71.193	ENSAPOG00000013736	chd6	67	72.309	Acanthochromis_polyacanthus
ENSMLUG00000016247	CHD6	100	92.571	ENSAMEG00000009496	CHD6	100	92.571	Ailuropoda_melanoleuca
ENSMLUG00000016247	CHD6	72	75.480	ENSATEG00000005608	chd6	62	77.326	Anabas_testudineus
ENSMLUG00000016247	CHD6	92	75.153	ENSACAG00000006842	CHD6	92	76.066	Anolis_carolinensis
ENSMLUG00000016247	CHD6	100	90.628	ENSANAG00000037548	CHD6	99	93.028	Aotus_nancymaae
ENSMLUG00000016247	CHD6	76	74.009	ENSAMXG00000009576	chd6	78	69.639	Astyanax_mexicanus
ENSMLUG00000016247	CHD6	100	89.089	ENSBTAG00000005733	CHD6	100	89.089	Bos_taurus
ENSMLUG00000016247	CHD6	100	90.812	ENSCJAG00000017920	CHD6	99	92.844	Callithrix_jacchus
ENSMLUG00000016247	CHD6	100	92.350	ENSCAFG00000009236	CHD6	100	92.350	Canis_familiaris
ENSMLUG00000016247	CHD6	99	91.657	ENSCAFG00020012906	CHD6	99	97.693	Canis_lupus_dingo
ENSMLUG00000016247	CHD6	100	89.236	ENSCHIG00000017606	CHD6	100	89.236	Capra_hircus
ENSMLUG00000016247	CHD6	84	89.921	ENSTSYG00000014635	CHD6	100	89.921	Carlito_syrichta
ENSMLUG00000016247	CHD6	100	90.143	ENSCPOG00000015641	CHD6	100	90.143	Cavia_porcellus
ENSMLUG00000016247	CHD6	100	90.849	ENSCCAG00000036828	CHD6	99	93.028	Cebus_capucinus
ENSMLUG00000016247	CHD6	100	90.812	ENSCATG00000039248	CHD6	99	93.028	Cercocebus_atys
ENSMLUG00000016247	CHD6	100	89.945	ENSCLAG00000013743	CHD6	100	89.908	Chinchilla_lanigera
ENSMLUG00000016247	CHD6	100	91.180	ENSCSAG00000013997	CHD6	100	91.180	Chlorocebus_sabaeus
ENSMLUG00000016247	CHD6	91	90.184	ENSCHOG00000012647	CHD6	95	90.184	Choloepus_hoffmanni
ENSMLUG00000016247	CHD6	99	73.153	ENSCPBG00000019382	CHD6	99	73.482	Chrysemys_picta_bellii
ENSMLUG00000016247	CHD6	100	91.143	ENSCANG00000043435	CHD6	99	93.028	Colobus_angolensis_palliatus
ENSMLUG00000016247	CHD6	100	88.121	ENSCGRG00001002694	Chd6	100	88.157	Cricetulus_griseus_chok1gshd
ENSMLUG00000016247	CHD6	82	73.397	ENSDARG00000017244	chd6	80	73.397	Danio_rerio
ENSMLUG00000016247	CHD6	99	89.450	ENSDNOG00000004176	CHD6	99	89.450	Dasypus_novemcinctus
ENSMLUG00000016247	CHD6	99	92.641	ENSEASG00005023433	CHD6	95	97.297	Equus_asinus_asinus
ENSMLUG00000016247	CHD6	99	93.265	ENSECAG00000011761	CHD6	100	93.265	Equus_caballus
ENSMLUG00000016247	CHD6	66	78.368	ENSELUG00000012309	chd6	90	78.368	Esox_lucius
ENSMLUG00000016247	CHD6	100	92.019	ENSFCAG00000003572	CHD6	100	92.019	Felis_catus
ENSMLUG00000016247	CHD6	99	89.705	ENSFDAG00000013791	CHD6	99	89.705	Fukomys_damarensis
ENSMLUG00000016247	CHD6	73	69.264	ENSGMOG00000011715	chd6	84	70.376	Gadus_morhua
ENSMLUG00000016247	CHD6	78	70.592	ENSGACG00000000037	chd6	92	64.779	Gasterosteus_aculeatus
ENSMLUG00000016247	CHD6	100	91.400	ENSGGOG00000013123	CHD6	99	93.028	Gorilla_gorilla
ENSMLUG00000016247	CHD6	75	71.875	ENSHBUG00000014701	chd6	66	71.928	Haplochromis_burtoni
ENSMLUG00000016247	CHD6	100	89.926	ENSHGLG00000004548	CHD6	100	89.963	Heterocephalus_glaber_female
ENSMLUG00000016247	CHD6	100	89.926	ENSHGLG00100006401	CHD6	100	89.963	Heterocephalus_glaber_male
ENSMLUG00000016247	CHD6	76	77.778	ENSIPUG00000003692	chd6	74	77.607	Ictalurus_punctatus
ENSMLUG00000016247	CHD6	100	90.474	ENSSTOG00000013382	CHD6	100	90.474	Ictidomys_tridecemlineatus
ENSMLUG00000016247	CHD6	86	76.193	ENSLACG00000010881	CHD6	85	76.251	Latimeria_chalumnae
ENSMLUG00000016247	CHD6	72	81.116	ENSLOCG00000007386	chd6	84	76.348	Lepisosteus_oculatus
ENSMLUG00000016247	CHD6	100	91.213	ENSLAFG00000012144	CHD6	100	91.213	Loxodonta_africana
ENSMLUG00000016247	CHD6	100	91.143	ENSMFAG00000032830	CHD6	99	93.028	Macaca_fascicularis
ENSMLUG00000016247	CHD6	100	91.143	ENSMMUG00000020458	CHD6	99	93.028	Macaca_mulatta
ENSMLUG00000016247	CHD6	100	91.143	ENSMNEG00000040847	CHD6	99	93.028	Macaca_nemestrina
ENSMLUG00000016247	CHD6	100	90.819	ENSMLEG00000031965	CHD6	99	93.028	Mandrillus_leucophaeus
ENSMLUG00000016247	CHD6	74	72.992	ENSMAMG00000013111	chd6	62	77.310	Mastacembelus_armatus
ENSMLUG00000016247	CHD6	99	71.345	ENSMGAG00000001121	CHD6	100	71.836	Meleagris_gallopavo
ENSMLUG00000016247	CHD6	100	90.546	ENSMICG00000016641	CHD6	99	92.294	Microcebus_murinus
ENSMLUG00000016247	CHD6	89	80.503	ENSMODG00000000720	-	99	80.544	Monodelphis_domestica
ENSMLUG00000016247	CHD6	100	86.576	MGP_CAROLIEiJ_G0024604	Chd6	100	93.840	Mus_caroli
ENSMLUG00000016247	CHD6	100	86.797	ENSMUSG00000057133	Chd6	100	93.755	Mus_musculus
ENSMLUG00000016247	CHD6	100	86.502	MGP_PahariEiJ_G0026048	Chd6	100	94.093	Mus_pahari
ENSMLUG00000016247	CHD6	100	86.760	MGP_SPRETEiJ_G0025526	Chd6	100	93.840	Mus_spretus
ENSMLUG00000016247	CHD6	100	90.902	ENSMPUG00000017695	CHD6	100	90.902	Mustela_putorius_furo
ENSMLUG00000016247	CHD6	75	73.089	ENSNBRG00000013839	chd6	78	73.220	Neolamprologus_brichardi
ENSMLUG00000016247	CHD6	100	89.423	ENSNLEG00000006496	CHD6	100	89.497	Nomascus_leucogenys
ENSMLUG00000016247	CHD6	100	86.282	ENSOPRG00000013376	-	100	86.282	Ochotona_princeps
ENSMLUG00000016247	CHD6	82	74.362	ENSONIG00000000393	chd6	84	74.362	Oreochromis_niloticus
ENSMLUG00000016247	CHD6	100	70.369	ENSOANG00000014347	CHD6	86	77.250	Ornithorhynchus_anatinus
ENSMLUG00000016247	CHD6	99	88.480	ENSOCUG00000012394	CHD6	100	88.480	Oryctolagus_cuniculus
ENSMLUG00000016247	CHD6	78	70.724	ENSORLG00020021891	chd6	95	85.571	Oryzias_latipes_hni
ENSMLUG00000016247	CHD6	99	89.641	ENSOGAG00000002427	CHD6	99	89.543	Otolemur_garnettii
ENSMLUG00000016247	CHD6	99	86.801	ENSOARG00000002597	CHD6	100	86.801	Ovis_aries
ENSMLUG00000016247	CHD6	100	92.129	ENSPPRG00000014756	CHD6	100	92.129	Panthera_pardus
ENSMLUG00000016247	CHD6	100	92.019	ENSPTIG00000011094	CHD6	100	92.019	Panthera_tigris_altaica
ENSMLUG00000016247	CHD6	100	91.400	ENSPTRG00000013504	CHD6	99	93.028	Pan_troglodytes
ENSMLUG00000016247	CHD6	100	91.106	ENSPANG00000025554	CHD6	99	92.844	Papio_anubis
ENSMLUG00000016247	CHD6	76	76.467	ENSPKIG00000005578	chd6	82	70.231	Paramormyrops_kingsleyae
ENSMLUG00000016247	CHD6	77	75.926	ENSPMGG00000014877	chd6	88	76.190	Periophthalmus_magnuspinnatus
ENSMLUG00000016247	CHD6	100	79.545	ENSPCIG00000028037	CHD6	100	80.022	Phascolarctos_cinereus
ENSMLUG00000016247	CHD6	75	71.429	ENSPLAG00000003128	chd6	66	70.538	Poecilia_latipinna
ENSMLUG00000016247	CHD6	69	74.064	ENSPREG00000022653	chd6	99	86.264	Poecilia_reticulata
ENSMLUG00000016247	CHD6	100	91.587	ENSPPYG00000011016	CHD6	100	91.587	Pongo_abelii
ENSMLUG00000016247	CHD6	99	90.832	ENSPCOG00000001089	CHD6	99	92.844	Propithecus_coquereli
ENSMLUG00000016247	CHD6	75	74.707	ENSPNYG00000022516	chd6	78	74.643	Pundamilia_nyererei
ENSMLUG00000016247	CHD6	79	73.195	ENSPNAG00000012825	chd6	77	73.084	Pygocentrus_nattereri
ENSMLUG00000016247	CHD6	100	86.282	ENSRNOG00000016744	Chd6	100	86.135	Rattus_norvegicus
ENSMLUG00000016247	CHD6	100	90.702	ENSSBOG00000022089	CHD6	99	93.028	Saimiri_boliviensis_boliviensis
ENSMLUG00000016247	CHD6	99	79.222	ENSSHAG00000017072	CHD6	99	79.699	Sarcophilus_harrisii
ENSMLUG00000016247	CHD6	77	76.735	ENSSFOG00015012920	chd6	80	73.317	Scleropages_formosus
ENSMLUG00000016247	CHD6	58	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSMLUG00000016247	CHD6	100	91.324	ENSSSCG00000007360	CHD6	100	92.145	Sus_scrofa
ENSMLUG00000016247	CHD6	97	72.902	ENSTGUG00000003179	CHD6	99	73.023	Taeniopygia_guttata
ENSMLUG00000016247	CHD6	74	77.159	ENSTNIG00000017487	chd6	82	77.159	Tetraodon_nigroviridis
ENSMLUG00000016247	CHD6	100	88.832	ENSTTRG00000013438	CHD6	100	88.832	Tursiops_truncatus
ENSMLUG00000016247	CHD6	100	90.147	ENSUAMG00000024036	CHD6	95	95.753	Ursus_americanus
ENSMLUG00000016247	CHD6	99	92.538	ENSUMAG00000002017	CHD6	99	92.543	Ursus_maritimus
ENSMLUG00000016247	CHD6	92	90.144	ENSVPAG00000007941	CHD6	93	90.144	Vicugna_pacos
ENSMLUG00000016247	CHD6	100	92.350	ENSVVUG00000029164	CHD6	100	92.350	Vulpes_vulpes
ENSMLUG00000016247	CHD6	93	70.074	ENSXETG00000021445	chd6	93	69.949	Xenopus_tropicalis