EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000016316 (Gene tree)
Gene ID: 102435066
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 8445 bases
Position: chrGL429772:11705093-11713537
Accession: 102435066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000014870	RRM_1	PF00076.22	1.1e-15	1	1
ENSMLUP00000014870	RRM_3	PF08777.11	6.7e-31	1	1
ENSMLUP00000014870	La	PF05383.17	4.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000016319	SSB-201	1256	XM_006083154	ENSMLUP00000014870	416 (aa)	XP_006083216	G1PUB9

Gene Model

Click here to download ENSMLUG00000016316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000016316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000016316	SSB	100	89.362	ENSG00000138385	SSB	100	98.333	Homo_sapiens
ENSMLUG00000016316	SSB	99	54.458	ENSAPOG00000003448	ssb	100	54.699	Acanthochromis_polyacanthus
ENSMLUG00000016316	SSB	100	89.786	ENSAMEG00000010507	SSB	100	89.786	Ailuropoda_melanoleuca
ENSMLUG00000016316	SSB	93	56.589	ENSACIG00000001738	ssb	97	56.589	Amphilophus_citrinellus
ENSMLUG00000016316	SSB	99	54.940	ENSAOCG00000020398	ssb	100	55.181	Amphiprion_ocellaris
ENSMLUG00000016316	SSB	99	55.181	ENSAPEG00000020395	ssb	100	55.422	Amphiprion_percula
ENSMLUG00000016316	SSB	99	57.349	ENSATEG00000016884	ssb	100	57.590	Anabas_testudineus
ENSMLUG00000016316	SSB	100	72.941	ENSAPLG00000006109	SSB	100	72.941	Anas_platyrhynchos
ENSMLUG00000016316	SSB	100	64.235	ENSACAG00000017008	SSB	99	64.235	Anolis_carolinensis
ENSMLUG00000016316	SSB	100	79.762	ENSANAG00000027195	-	100	81.190	Aotus_nancymaae
ENSMLUG00000016316	SSB	99	52.771	ENSACLG00000010798	ssb	100	53.253	Astatotilapia_calliptera
ENSMLUG00000016316	SSB	99	53.318	ENSAMXG00000012606	ssb	100	54.739	Astyanax_mexicanus
ENSMLUG00000016316	SSB	100	89.286	ENSBTAG00000008716	SSB	100	89.286	Bos_taurus
ENSMLUG00000016316	SSB	71	34.768	WBGene00016653	C44E4.4	76	34.768	Caenorhabditis_elegans
ENSMLUG00000016316	SSB	100	89.286	ENSCJAG00000045073	SSB	100	89.286	Callithrix_jacchus
ENSMLUG00000016316	SSB	100	89.786	ENSCAFG00000012418	SSB	100	89.786	Canis_familiaris
ENSMLUG00000016316	SSB	100	89.786	ENSCAFG00020002900	SSB	100	89.786	Canis_lupus_dingo
ENSMLUG00000016316	SSB	100	84.173	ENSCHIG00000022196	-	100	84.173	Capra_hircus
ENSMLUG00000016316	SSB	100	89.286	ENSCHIG00000022624	-	100	89.286	Capra_hircus
ENSMLUG00000016316	SSB	100	89.286	ENSTSYG00000000097	SSB	100	89.286	Carlito_syrichta
ENSMLUG00000016316	SSB	100	91.190	ENSCPOG00000003338	SSB	100	91.190	Cavia_porcellus
ENSMLUG00000016316	SSB	100	90.238	ENSCCAG00000035147	SSB	100	90.238	Cebus_capucinus
ENSMLUG00000016316	SSB	100	65.952	ENSCATG00000042909	-	100	65.952	Cercocebus_atys
ENSMLUG00000016316	SSB	100	69.524	ENSCATG00000036701	SSB	100	69.524	Cercocebus_atys
ENSMLUG00000016316	SSB	100	90.714	ENSCLAG00000015617	-	100	90.714	Chinchilla_lanigera
ENSMLUG00000016316	SSB	100	89.762	ENSCSAG00000015200	SSB	89	89.762	Chlorocebus_sabaeus
ENSMLUG00000016316	SSB	98	81.509	ENSCSAG00000018390	-	100	81.509	Chlorocebus_sabaeus
ENSMLUG00000016316	SSB	100	89.286	ENSCHOG00000007763	SSB	100	89.286	Choloepus_hoffmanni
ENSMLUG00000016316	SSB	100	74.292	ENSCPBG00000006519	SSB	100	75.236	Chrysemys_picta_bellii
ENSMLUG00000016316	SSB	100	89.762	ENSCANG00000027695	SSB	100	89.762	Colobus_angolensis_palliatus
ENSMLUG00000016316	SSB	98	69.565	ENSCANG00000028838	-	95	69.565	Colobus_angolensis_palliatus
ENSMLUG00000016316	SSB	100	75.656	ENSCANG00000033240	-	100	75.656	Colobus_angolensis_palliatus
ENSMLUG00000016316	SSB	100	78.469	ENSCGRG00001024831	Ssb	100	78.469	Cricetulus_griseus_chok1gshd
ENSMLUG00000016316	SSB	100	78.469	ENSCGRG00000005387	Ssb	100	78.469	Cricetulus_griseus_crigri
ENSMLUG00000016316	SSB	98	56.934	ENSCSEG00000011599	ssb	99	57.317	Cynoglossus_semilaevis
ENSMLUG00000016316	SSB	99	56.250	ENSCVAG00000021558	ssb	100	57.074	Cyprinodon_variegatus
ENSMLUG00000016316	SSB	99	54.654	ENSDARG00000029252	ssb	100	55.131	Danio_rerio
ENSMLUG00000016316	SSB	100	88.571	ENSDNOG00000013450	SSB	100	88.571	Dasypus_novemcinctus
ENSMLUG00000016316	SSB	100	84.173	ENSDORG00000005543	Ssb	100	84.173	Dipodomys_ordii
ENSMLUG00000016316	SSB	63	36.397	FBgn0011638	La	67	36.996	Drosophila_melanogaster
ENSMLUG00000016316	SSB	57	93.532	ENSETEG00000004614	-	61	93.532	Echinops_telfairi
ENSMLUG00000016316	SSB	97	45.050	ENSEBUG00000001237	ssb	96	46.040	Eptatretus_burgeri
ENSMLUG00000016316	SSB	100	91.667	ENSEASG00005022835	SSB	100	91.667	Equus_asinus_asinus
ENSMLUG00000016316	SSB	100	91.905	ENSECAG00000018495	SSB	100	91.905	Equus_caballus
ENSMLUG00000016316	SSB	80	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSMLUG00000016316	SSB	99	58.134	ENSELUG00000020929	ssb	100	58.950	Esox_lucius
ENSMLUG00000016316	SSB	100	90.024	ENSFCAG00000011601	SSB	100	90.024	Felis_catus
ENSMLUG00000016316	SSB	100	70.142	ENSFALG00000000930	SSB	100	72.749	Ficedula_albicollis
ENSMLUG00000016316	SSB	100	90.000	ENSFDAG00000000598	SSB	100	90.000	Fukomys_damarensis
ENSMLUG00000016316	SSB	74	52.716	ENSFHEG00000003268	ssb	93	53.165	Fundulus_heteroclitus
ENSMLUG00000016316	SSB	97	54.054	ENSGMOG00000002664	ssb	99	54.902	Gadus_morhua
ENSMLUG00000016316	SSB	100	72.577	ENSGALG00000009677	SSB	100	72.577	Gallus_gallus
ENSMLUG00000016316	SSB	99	54.306	ENSGAFG00000002749	ssb	100	54.785	Gambusia_affinis
ENSMLUG00000016316	SSB	99	54.458	ENSGACG00000005107	ssb	100	54.177	Gasterosteus_aculeatus
ENSMLUG00000016316	SSB	100	74.528	ENSGAGG00000007807	SSB	100	75.000	Gopherus_agassizii
ENSMLUG00000016316	SSB	56	82.083	ENSGGOG00000023471	-	92	82.083	Gorilla_gorilla
ENSMLUG00000016316	SSB	100	73.333	ENSGGOG00000024891	-	100	73.333	Gorilla_gorilla
ENSMLUG00000016316	SSB	99	52.530	ENSHBUG00000006584	ssb	100	53.012	Haplochromis_burtoni
ENSMLUG00000016316	SSB	100	82.227	ENSHGLG00000004478	-	100	82.227	Heterocephalus_glaber_female
ENSMLUG00000016316	SSB	100	81.429	ENSHGLG00000005832	-	100	81.429	Heterocephalus_glaber_female
ENSMLUG00000016316	SSB	100	90.714	ENSHGLG00000017580	-	100	90.714	Heterocephalus_glaber_female
ENSMLUG00000016316	SSB	100	90.714	ENSHGLG00100003084	-	100	90.714	Heterocephalus_glaber_male
ENSMLUG00000016316	SSB	100	78.417	ENSHGLG00100008767	-	100	78.417	Heterocephalus_glaber_male
ENSMLUG00000016316	SSB	98	53.398	ENSHCOG00000019011	ssb	99	53.415	Hippocampus_comes
ENSMLUG00000016316	SSB	99	56.235	ENSIPUG00000003681	SSB	100	56.706	Ictalurus_punctatus
ENSMLUG00000016316	SSB	100	90.238	ENSSTOG00000008416	SSB	100	90.238	Ictidomys_tridecemlineatus
ENSMLUG00000016316	SSB	99	66.667	ENSJJAG00000016250	-	99	66.667	Jaculus_jaculus
ENSMLUG00000016316	SSB	100	81.429	ENSJJAG00000023158	-	100	81.429	Jaculus_jaculus
ENSMLUG00000016316	SSB	99	55.663	ENSKMAG00000017317	ssb	100	55.904	Kryptolebias_marmoratus
ENSMLUG00000016316	SSB	99	53.976	ENSLBEG00000017345	ssb	100	54.217	Labrus_bergylta
ENSMLUG00000016316	SSB	99	64.218	ENSLACG00000014056	SSB	99	66.588	Latimeria_chalumnae
ENSMLUG00000016316	SSB	99	64.524	ENSLOCG00000007933	ssb	99	64.762	Lepisosteus_oculatus
ENSMLUG00000016316	SSB	100	74.524	ENSLAFG00000028909	-	100	74.524	Loxodonta_africana
ENSMLUG00000016316	SSB	72	69.799	ENSLAFG00000026721	-	98	69.799	Loxodonta_africana
ENSMLUG00000016316	SSB	100	85.816	ENSLAFG00000000867	-	100	86.998	Loxodonta_africana
ENSMLUG00000016316	SSB	89	76.613	ENSMFAG00000041478	-	100	76.613	Macaca_fascicularis
ENSMLUG00000016316	SSB	100	89.762	ENSMFAG00000039066	SSB	100	89.762	Macaca_fascicularis
ENSMLUG00000016316	SSB	100	75.895	ENSMMUG00000011724	-	97	75.895	Macaca_mulatta
ENSMLUG00000016316	SSB	100	89.762	ENSMMUG00000023051	SSB	100	89.762	Macaca_mulatta
ENSMLUG00000016316	SSB	99	62.440	ENSMMUG00000039889	-	100	62.679	Macaca_mulatta
ENSMLUG00000016316	SSB	100	77.176	ENSMNEG00000028321	SSB	85	98.261	Macaca_nemestrina
ENSMLUG00000016316	SSB	89	76.613	ENSMNEG00000034698	-	100	76.613	Macaca_nemestrina
ENSMLUG00000016316	SSB	100	89.762	ENSMLEG00000035717	SSB	100	89.762	Mandrillus_leucophaeus
ENSMLUG00000016316	SSB	100	64.200	ENSMLEG00000042644	-	100	64.200	Mandrillus_leucophaeus
ENSMLUG00000016316	SSB	99	57.590	ENSMAMG00000004800	ssb	100	57.831	Mastacembelus_armatus
ENSMLUG00000016316	SSB	99	52.771	ENSMZEG00005005749	ssb	100	53.253	Maylandia_zebra
ENSMLUG00000016316	SSB	100	72.340	ENSMGAG00000010328	SSB	99	77.561	Meleagris_gallopavo
ENSMLUG00000016316	SSB	99	89.713	ENSMICG00000028252	-	99	89.713	Microcebus_murinus
ENSMLUG00000016316	SSB	98	82.641	ENSMICG00000033304	-	94	84.675	Microcebus_murinus
ENSMLUG00000016316	SSB	100	53.302	ENSMODG00000019271	-	100	53.302	Monodelphis_domestica
ENSMLUG00000016316	SSB	86	80.503	ENSMODG00000007027	-	99	80.503	Monodelphis_domestica
ENSMLUG00000016316	SSB	100	77.698	ENSMODG00000008227	-	100	77.698	Monodelphis_domestica
ENSMLUG00000016316	SSB	91	55.145	ENSMALG00000008045	ssb	90	57.106	Monopterus_albus
ENSMLUG00000016316	SSB	100	78.520	MGP_CAROLIEiJ_G0023629	-	100	91.848	Mus_caroli
ENSMLUG00000016316	SSB	100	77.804	ENSMUSG00000068882	Ssb	100	91.848	Mus_musculus
ENSMLUG00000016316	SSB	100	77.804	MGP_PahariEiJ_G0025081	-	100	91.848	Mus_pahari
ENSMLUG00000016316	SSB	100	77.804	MGP_SPRETEiJ_G0024551	Ssb	100	91.848	Mus_spretus
ENSMLUG00000016316	SSB	100	90.714	ENSMPUG00000000785	SSB	100	90.714	Mustela_putorius_furo
ENSMLUG00000016316	SSB	99	52.644	ENSNBRG00000012661	ssb	100	53.125	Neolamprologus_brichardi
ENSMLUG00000016316	SSB	100	64.608	ENSNLEG00000028754	-	100	65.083	Nomascus_leucogenys
ENSMLUG00000016316	SSB	100	90.000	ENSNLEG00000004958	SSB	100	90.000	Nomascus_leucogenys
ENSMLUG00000016316	SSB	60	88.710	ENSMEUG00000001650	-	100	88.710	Notamacropus_eugenii
ENSMLUG00000016316	SSB	73	69.836	ENSOPRG00000008475	-	100	69.836	Ochotona_princeps
ENSMLUG00000016316	SSB	94	85.897	ENSODEG00000004202	-	100	85.897	Octodon_degus
ENSMLUG00000016316	SSB	99	52.404	ENSONIG00000008776	ssb	100	52.885	Oreochromis_niloticus
ENSMLUG00000016316	SSB	100	78.333	ENSOANG00000008543	SSB	100	80.238	Ornithorhynchus_anatinus
ENSMLUG00000016316	SSB	100	90.000	ENSOCUG00000010396	SSB	100	90.000	Oryctolagus_cuniculus
ENSMLUG00000016316	SSB	99	57.108	ENSORLG00000017208	ssb	100	57.349	Oryzias_latipes
ENSMLUG00000016316	SSB	99	56.971	ENSORLG00020022574	ssb	100	57.212	Oryzias_latipes_hni
ENSMLUG00000016316	SSB	99	56.867	ENSORLG00015016592	ssb	100	57.108	Oryzias_latipes_hsok
ENSMLUG00000016316	SSB	99	56.250	ENSOMEG00000003193	ssb	100	56.971	Oryzias_melastigma
ENSMLUG00000016316	SSB	100	86.967	ENSOGAG00000029768	SSB	100	86.967	Otolemur_garnettii
ENSMLUG00000016316	SSB	100	88.810	ENSOARG00000002906	SSB	100	88.810	Ovis_aries
ENSMLUG00000016316	SSB	100	72.381	ENSPPAG00000032427	-	100	86.047	Pan_paniscus
ENSMLUG00000016316	SSB	100	89.362	ENSPPAG00000042673	SSB	100	89.362	Pan_paniscus
ENSMLUG00000016316	SSB	98	70.171	ENSPPAG00000006189	-	96	73.643	Pan_paniscus
ENSMLUG00000016316	SSB	100	90.024	ENSPPRG00000006599	SSB	100	90.024	Panthera_pardus
ENSMLUG00000016316	SSB	100	89.786	ENSPTIG00000011021	SSB	97	89.786	Panthera_tigris_altaica
ENSMLUG00000016316	SSB	100	89.362	ENSPTRG00000012620	SSB	100	89.362	Pan_troglodytes
ENSMLUG00000016316	SSB	100	68.810	ENSPTRG00000042880	-	100	68.810	Pan_troglodytes
ENSMLUG00000016316	SSB	100	89.762	ENSPANG00000007440	SSB	100	89.762	Papio_anubis
ENSMLUG00000016316	SSB	100	63.810	ENSPANG00000034126	-	100	64.286	Papio_anubis
ENSMLUG00000016316	SSB	98	62.470	ENSPANG00000031877	-	95	62.470	Papio_anubis
ENSMLUG00000016316	SSB	99	60.817	ENSPKIG00000019325	ssb	99	61.151	Paramormyrops_kingsleyae
ENSMLUG00000016316	SSB	100	70.991	ENSPSIG00000002265	SSB	93	71.934	Pelodiscus_sinensis
ENSMLUG00000016316	SSB	84	52.125	ENSPMGG00000020075	ssb	90	53.652	Periophthalmus_magnuspinnatus
ENSMLUG00000016316	SSB	79	49.394	ENSPMAG00000002982	ssb	100	43.274	Petromyzon_marinus
ENSMLUG00000016316	SSB	100	77.619	ENSPCIG00000028591	-	100	79.572	Phascolarctos_cinereus
ENSMLUG00000016316	SSB	99	55.422	ENSPFOG00000009650	ssb	100	55.663	Poecilia_formosa
ENSMLUG00000016316	SSB	99	55.422	ENSPLAG00000020498	ssb	100	55.663	Poecilia_latipinna
ENSMLUG00000016316	SSB	99	55.181	ENSPMEG00000001051	ssb	100	55.422	Poecilia_mexicana
ENSMLUG00000016316	SSB	93	55.897	ENSPREG00000003708	ssb	98	56.154	Poecilia_reticulata
ENSMLUG00000016316	SSB	100	90.000	ENSPPYG00000012919	SSB	100	90.000	Pongo_abelii
ENSMLUG00000016316	SSB	95	84.673	ENSPCAG00000010276	SSB	100	85.176	Procavia_capensis
ENSMLUG00000016316	SSB	100	86.190	ENSPCOG00000015741	-	100	86.190	Propithecus_coquereli
ENSMLUG00000016316	SSB	100	78.095	ENSPCOG00000023189	-	100	78.095	Propithecus_coquereli
ENSMLUG00000016316	SSB	88	90.736	ENSPVAG00000006615	SSB	99	90.736	Pteropus_vampyrus
ENSMLUG00000016316	SSB	99	52.771	ENSPNYG00000006444	ssb	100	53.253	Pundamilia_nyererei
ENSMLUG00000016316	SSB	99	53.774	ENSPNAG00000011708	ssb	100	55.189	Pygocentrus_nattereri
ENSMLUG00000016316	SSB	100	78.759	ENSRNOG00000007998	Ssb	100	78.759	Rattus_norvegicus
ENSMLUG00000016316	SSB	100	76.739	ENSRNOG00000011606	AABR07061825.1	100	76.739	Rattus_norvegicus
ENSMLUG00000016316	SSB	89	81.963	ENSRBIG00000041608	-	98	81.963	Rhinopithecus_bieti
ENSMLUG00000016316	SSB	100	64.371	ENSRBIG00000029918	-	100	64.371	Rhinopithecus_bieti
ENSMLUG00000016316	SSB	94	74.300	ENSRBIG00000041232	-	98	74.300	Rhinopithecus_bieti
ENSMLUG00000016316	SSB	100	73.882	ENSRBIG00000041972	SSB	88	98.261	Rhinopithecus_bieti
ENSMLUG00000016316	SSB	100	89.762	ENSRROG00000040346	SSB	100	89.762	Rhinopithecus_roxellana
ENSMLUG00000016316	SSB	98	80.482	ENSRROG00000034102	-	98	80.387	Rhinopithecus_roxellana
ENSMLUG00000016316	SSB	98	75.610	ENSRROG00000031684	-	100	75.610	Rhinopithecus_roxellana
ENSMLUG00000016316	SSB	100	73.872	ENSRROG00000007149	-	100	73.872	Rhinopithecus_roxellana
ENSMLUG00000016316	SSB	100	90.000	ENSSBOG00000027204	SSB	100	90.000	Saimiri_boliviensis_boliviensis
ENSMLUG00000016316	SSB	100	77.143	ENSSHAG00000018062	SSB	100	79.097	Sarcophilus_harrisii
ENSMLUG00000016316	SSB	99	62.085	ENSSFOG00015000550	ssb	100	62.322	Scleropages_formosus
ENSMLUG00000016316	SSB	99	52.657	ENSSMAG00000013885	ssb	99	55.959	Scophthalmus_maximus
ENSMLUG00000016316	SSB	99	56.627	ENSSDUG00000020117	ssb	100	56.867	Seriola_dumerili
ENSMLUG00000016316	SSB	99	54.831	ENSSLDG00000002525	ssb	100	54.831	Seriola_lalandi_dorsalis
ENSMLUG00000016316	SSB	95	81.156	ENSSARG00000007747	SSB	100	81.156	Sorex_araneus
ENSMLUG00000016316	SSB	100	70.853	ENSSPUG00000012112	SSB	100	73.223	Sphenodon_punctatus
ENSMLUG00000016316	SSB	99	55.904	ENSSPAG00000005696	ssb	100	56.145	Stegastes_partitus
ENSMLUG00000016316	SSB	98	74.696	ENSSSCG00000015938	SSB	98	75.912	Sus_scrofa
ENSMLUG00000016316	SSB	100	69.811	ENSTGUG00000007942	SSB	100	72.406	Taeniopygia_guttata
ENSMLUG00000016316	SSB	99	55.181	ENSTRUG00000017839	ssb	100	56.145	Takifugu_rubripes
ENSMLUG00000016316	SSB	91	57.592	ENSTNIG00000000915	ssb	100	57.592	Tetraodon_nigroviridis
ENSMLUG00000016316	SSB	83	98.261	ENSTBEG00000009056	SSB	82	98.261	Tupaia_belangeri
ENSMLUG00000016316	SSB	100	89.549	ENSTTRG00000002152	SSB	100	89.549	Tursiops_truncatus
ENSMLUG00000016316	SSB	93	91.260	ENSUAMG00000027833	SSB	98	91.260	Ursus_americanus
ENSMLUG00000016316	SSB	100	90.261	ENSUMAG00000013907	SSB	100	90.261	Ursus_maritimus
ENSMLUG00000016316	SSB	100	89.286	ENSVPAG00000007183	SSB	100	89.286	Vicugna_pacos
ENSMLUG00000016316	SSB	100	89.786	ENSVVUG00000016573	SSB	78	89.786	Vulpes_vulpes
ENSMLUG00000016316	SSB	100	55.756	ENSXETG00000025402	ssb	100	57.562	Xenopus_tropicalis
ENSMLUG00000016316	SSB	92	54.167	ENSXCOG00000019109	ssb	93	62.992	Xiphophorus_couchianus
ENSMLUG00000016316	SSB	99	54.785	ENSXMAG00000004888	ssb	100	55.024	Xiphophorus_maculatus