EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000016885 (Gene tree)
Gene ID: 102418732
Gene Symbol: XRN1
Alias: SEP1
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 202541 bases
Position: chrGL429788:9138391-9340931
Accession: 102418732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000015405	XRN_N	PF03159.18	2e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000016904	XRN1-201	5175	XM_006085764	ENSMLUP00000015405	1724 (aa)	XP_006085826	G1PVM9

Gene Model

Click here to download ENSMLUG00000016885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000016885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000016885	XRN1	100	88.915	ENSG00000114127	XRN1	100	98.182	Homo_sapiens
ENSMLUG00000016885	XRN1	93	72.638	ENSAPOG00000000622	xrn1	100	69.985	Acanthochromis_polyacanthus
ENSMLUG00000016885	XRN1	100	92.206	ENSAMEG00000012538	XRN1	100	92.379	Ailuropoda_melanoleuca
ENSMLUG00000016885	XRN1	93	72.159	ENSACIG00000001057	xrn1	98	72.182	Amphilophus_citrinellus
ENSMLUG00000016885	XRN1	94	70.916	ENSAOCG00000014097	xrn1	98	70.916	Amphiprion_ocellaris
ENSMLUG00000016885	XRN1	100	59.888	ENSAPEG00000006620	xrn1	91	72.071	Amphiprion_percula
ENSMLUG00000016885	XRN1	94	69.326	ENSATEG00000009752	xrn1	100	69.397	Anabas_testudineus
ENSMLUG00000016885	XRN1	99	75.884	ENSAPLG00000004905	XRN1	100	75.884	Anas_platyrhynchos
ENSMLUG00000016885	XRN1	100	71.822	ENSACAG00000004985	XRN1	100	71.822	Anolis_carolinensis
ENSMLUG00000016885	XRN1	100	89.030	ENSANAG00000029013	XRN1	99	94.616	Aotus_nancymaae
ENSMLUG00000016885	XRN1	100	59.800	ENSACLG00000004806	xrn1	99	59.933	Astatotilapia_calliptera
ENSMLUG00000016885	XRN1	99	59.396	ENSAMXG00000019370	xrn1	95	94.175	Astyanax_mexicanus
ENSMLUG00000016885	XRN1	100	88.876	ENSBTAG00000011524	XRN1	100	88.876	Bos_taurus
ENSMLUG00000016885	XRN1	70	39.269	WBGene00012730	xrn-1	83	39.175	Caenorhabditis_elegans
ENSMLUG00000016885	XRN1	100	88.857	ENSCJAG00000001872	XRN1	100	88.857	Callithrix_jacchus
ENSMLUG00000016885	XRN1	100	92.263	ENSCAFG00000007783	XRN1	100	92.379	Canis_familiaris
ENSMLUG00000016885	XRN1	100	92.263	ENSCAFG00020009120	XRN1	98	96.262	Canis_lupus_dingo
ENSMLUG00000016885	XRN1	99	91.304	ENSCHIG00000019192	XRN1	99	91.304	Capra_hircus
ENSMLUG00000016885	XRN1	100	88.517	ENSTSYG00000002705	XRN1	100	88.517	Carlito_syrichta
ENSMLUG00000016885	XRN1	55	75.954	ENSCAPG00000004604	-	97	75.954	Cavia_aperea
ENSMLUG00000016885	XRN1	100	89.319	ENSCCAG00000034800	XRN1	99	96.820	Cebus_capucinus
ENSMLUG00000016885	XRN1	100	89.492	ENSCATG00000041794	XRN1	100	89.607	Cercocebus_atys
ENSMLUG00000016885	XRN1	100	87.572	ENSCLAG00000001451	XRN1	98	94.913	Chinchilla_lanigera
ENSMLUG00000016885	XRN1	100	88.940	ENSCSAG00000011265	XRN1	100	89.054	Chlorocebus_sabaeus
ENSMLUG00000016885	XRN1	56	98.701	ENSCHOG00000013961	-	58	98.701	Choloepus_hoffmanni
ENSMLUG00000016885	XRN1	69	45.234	ENSCSAVG00000008584	-	98	44.809	Ciona_savignyi
ENSMLUG00000016885	XRN1	100	89.607	ENSCANG00000037495	XRN1	99	97.138	Colobus_angolensis_palliatus
ENSMLUG00000016885	XRN1	100	87.002	ENSCGRG00001019411	Xrn1	98	95.231	Cricetulus_griseus_chok1gshd
ENSMLUG00000016885	XRN1	100	87.002	ENSCGRG00000012464	Xrn1	98	95.231	Cricetulus_griseus_crigri
ENSMLUG00000016885	XRN1	93	67.314	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSMLUG00000016885	XRN1	66	71.781	ENSCVAG00000013089	xrn1	99	72.046	Cyprinodon_variegatus
ENSMLUG00000016885	XRN1	99	62.752	ENSDARG00000091652	xrn1	98	79.958	Danio_rerio
ENSMLUG00000016885	XRN1	100	85.764	ENSDORG00000013833	Xrn1	100	85.764	Dipodomys_ordii
ENSMLUG00000016885	XRN1	73	40.093	FBgn0020261	pcm	76	40.154	Drosophila_melanogaster
ENSMLUG00000016885	XRN1	86	97.297	ENSETEG00000003978	XRN1	87	97.297	Echinops_telfairi
ENSMLUG00000016885	XRN1	100	90.878	ENSEASG00005002687	XRN1	98	96.184	Equus_asinus_asinus
ENSMLUG00000016885	XRN1	100	88.653	ENSECAG00000008301	XRN1	100	88.768	Equus_caballus
ENSMLUG00000016885	XRN1	92	82.502	ENSEEUG00000011323	XRN1	92	82.502	Erinaceus_europaeus
ENSMLUG00000016885	XRN1	100	61.029	ENSELUG00000000169	xrn1	100	61.029	Esox_lucius
ENSMLUG00000016885	XRN1	100	86.036	ENSFCAG00000027589	XRN1	99	96.044	Felis_catus
ENSMLUG00000016885	XRN1	100	74.523	ENSFALG00000007021	XRN1	100	74.579	Ficedula_albicollis
ENSMLUG00000016885	XRN1	100	87.832	ENSFDAG00000020494	XRN1	98	94.913	Fukomys_damarensis
ENSMLUG00000016885	XRN1	83	67.657	ENSGMOG00000006396	xrn1	84	67.657	Gadus_morhua
ENSMLUG00000016885	XRN1	100	75.056	ENSGALG00000002706	XRN1	100	75.056	Gallus_gallus
ENSMLUG00000016885	XRN1	100	58.924	ENSGACG00000014328	xrn1	100	59.580	Gasterosteus_aculeatus
ENSMLUG00000016885	XRN1	94	78.303	ENSGAGG00000017535	XRN1	99	78.303	Gopherus_agassizii
ENSMLUG00000016885	XRN1	100	89.145	ENSGGOG00000008047	XRN1	100	89.145	Gorilla_gorilla
ENSMLUG00000016885	XRN1	94	70.182	ENSHBUG00000005908	xrn1	98	72.690	Haplochromis_burtoni
ENSMLUG00000016885	XRN1	100	88.646	ENSHGLG00000014476	XRN1	98	95.390	Heterocephalus_glaber_female
ENSMLUG00000016885	XRN1	100	88.703	ENSHGLG00100015130	XRN1	98	95.390	Heterocephalus_glaber_male
ENSMLUG00000016885	XRN1	96	70.883	ENSHCOG00000014062	xrn1	99	70.804	Hippocampus_comes
ENSMLUG00000016885	XRN1	99	60.716	ENSIPUG00000015229	xrn1	99	61.924	Ictalurus_punctatus
ENSMLUG00000016885	XRN1	100	90.537	ENSSTOG00000013552	XRN1	99	96.502	Ictidomys_tridecemlineatus
ENSMLUG00000016885	XRN1	98	85.748	ENSJJAG00000010863	Xrn1	98	94.536	Jaculus_jaculus
ENSMLUG00000016885	XRN1	94	61.229	ENSKMAG00000021356	xrn1	94	76.160	Kryptolebias_marmoratus
ENSMLUG00000016885	XRN1	100	59.310	ENSLBEG00000018656	xrn1	99	94.286	Labrus_bergylta
ENSMLUG00000016885	XRN1	100	68.746	ENSLACG00000009020	XRN1	100	69.178	Latimeria_chalumnae
ENSMLUG00000016885	XRN1	100	63.941	ENSLOCG00000007944	xrn1	100	63.941	Lepisosteus_oculatus
ENSMLUG00000016885	XRN1	61	94.792	ENSLAFG00000015426	XRN1	99	94.792	Loxodonta_africana
ENSMLUG00000016885	XRN1	100	89.550	ENSMFAG00000032599	XRN1	100	89.665	Macaca_fascicularis
ENSMLUG00000016885	XRN1	100	89.550	ENSMMUG00000014038	XRN1	100	89.665	Macaca_mulatta
ENSMLUG00000016885	XRN1	100	89.376	ENSMNEG00000034217	XRN1	100	89.492	Macaca_nemestrina
ENSMLUG00000016885	XRN1	92	70.347	ENSMAMG00000013219	xrn1	94	77.049	Mastacembelus_armatus
ENSMLUG00000016885	XRN1	100	59.577	ENSMZEG00005015099	xrn1	99	59.711	Maylandia_zebra
ENSMLUG00000016885	XRN1	99	74.811	ENSMGAG00000006333	XRN1	100	74.811	Meleagris_gallopavo
ENSMLUG00000016885	XRN1	100	88.594	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSMLUG00000016885	XRN1	55	94.277	ENSMOCG00000008665	Xrn1	98	94.277	Microtus_ochrogaster
ENSMLUG00000016885	XRN1	100	78.641	ENSMODG00000021236	XRN1	100	78.641	Monodelphis_domestica
ENSMLUG00000016885	XRN1	94	66.614	ENSMALG00000004098	xrn1	98	66.850	Monopterus_albus
ENSMLUG00000016885	XRN1	100	79.017	MGP_CAROLIEiJ_G0032535	Xrn1	100	100.000	Mus_caroli
ENSMLUG00000016885	XRN1	100	85.987	ENSMUSG00000032410	Xrn1	100	100.000	Mus_musculus
ENSMLUG00000016885	XRN1	100	86.393	MGP_PahariEiJ_G0015404	Xrn1	100	100.000	Mus_pahari
ENSMLUG00000016885	XRN1	100	86.045	MGP_SPRETEiJ_G0033678	Xrn1	100	100.000	Mus_spretus
ENSMLUG00000016885	XRN1	100	89.971	ENSMPUG00000012040	XRN1	100	90.086	Mustela_putorius_furo
ENSMLUG00000016885	XRN1	56	91.097	ENSNGAG00000023964	Xrn1	98	91.097	Nannospalax_galili
ENSMLUG00000016885	XRN1	100	89.434	ENSNLEG00000004726	XRN1	100	89.550	Nomascus_leucogenys
ENSMLUG00000016885	XRN1	70	98.969	ENSMEUG00000014473	-	72	99.029	Notamacropus_eugenii
ENSMLUG00000016885	XRN1	79	83.520	ENSOPRG00000007337	-	78	83.520	Ochotona_princeps
ENSMLUG00000016885	XRN1	100	60.562	ENSONIG00000016673	xrn1	99	63.677	Oreochromis_niloticus
ENSMLUG00000016885	XRN1	92	75.623	ENSOANG00000006735	XRN1	100	75.623	Ornithorhynchus_anatinus
ENSMLUG00000016885	XRN1	100	88.309	ENSOCUG00000001861	XRN1	100	88.309	Oryctolagus_cuniculus
ENSMLUG00000016885	XRN1	94	72.793	ENSORLG00000013005	xrn1	100	60.023	Oryzias_latipes
ENSMLUG00000016885	XRN1	94	72.596	ENSORLG00020005559	xrn1	100	61.029	Oryzias_latipes_hni
ENSMLUG00000016885	XRN1	100	60.704	ENSORLG00015022523	xrn1	89	72.325	Oryzias_latipes_hsok
ENSMLUG00000016885	XRN1	90	72.949	ENSOMEG00000015397	xrn1	99	72.949	Oryzias_melastigma
ENSMLUG00000016885	XRN1	100	85.444	ENSOGAG00000000170	XRN1	100	85.444	Otolemur_garnettii
ENSMLUG00000016885	XRN1	99	90.987	ENSOARG00000006343	XRN1	99	90.987	Ovis_aries
ENSMLUG00000016885	XRN1	100	88.972	ENSPPAG00000010180	XRN1	100	88.972	Pan_paniscus
ENSMLUG00000016885	XRN1	100	90.017	ENSPPRG00000007125	XRN1	100	90.133	Panthera_pardus
ENSMLUG00000016885	XRN1	100	90.017	ENSPTIG00000021081	XRN1	100	90.133	Panthera_tigris_altaica
ENSMLUG00000016885	XRN1	100	89.030	ENSPTRG00000015482	XRN1	100	89.030	Pan_troglodytes
ENSMLUG00000016885	XRN1	100	89.550	ENSPANG00000010638	XRN1	100	89.550	Papio_anubis
ENSMLUG00000016885	XRN1	100	76.655	ENSPSIG00000018050	XRN1	100	76.826	Pelodiscus_sinensis
ENSMLUG00000016885	XRN1	56	77.551	ENSPMGG00000002648	xrn1	98	78.493	Periophthalmus_magnuspinnatus
ENSMLUG00000016885	XRN1	55	94.754	ENSPEMG00000020610	Xrn1	98	94.754	Peromyscus_maniculatus_bairdii
ENSMLUG00000016885	XRN1	64	51.055	ENSPMAG00000002975	xrn1	91	78.448	Petromyzon_marinus
ENSMLUG00000016885	XRN1	96	87.451	ENSPCIG00000028735	XRN1	99	89.664	Phascolarctos_cinereus
ENSMLUG00000016885	XRN1	91	63.184	ENSPFOG00000013932	xrn1	99	63.281	Poecilia_formosa
ENSMLUG00000016885	XRN1	91	62.958	ENSPLAG00000021653	xrn1	99	63.184	Poecilia_latipinna
ENSMLUG00000016885	XRN1	89	63.198	ENSPMEG00000003076	xrn1	95	63.412	Poecilia_mexicana
ENSMLUG00000016885	XRN1	100	60.134	ENSPREG00000021147	xrn1	100	60.559	Poecilia_reticulata
ENSMLUG00000016885	XRN1	100	88.424	ENSPPYG00000014172	XRN1	100	88.424	Pongo_abelii
ENSMLUG00000016885	XRN1	88	80.645	ENSPCAG00000005638	XRN1	96	80.645	Procavia_capensis
ENSMLUG00000016885	XRN1	100	89.094	ENSPCOG00000013089	XRN1	99	95.234	Propithecus_coquereli
ENSMLUG00000016885	XRN1	94	91.421	ENSPVAG00000016265	XRN1	93	91.421	Pteropus_vampyrus
ENSMLUG00000016885	XRN1	94	71.101	ENSPNYG00000010570	xrn1	98	71.021	Pundamilia_nyererei
ENSMLUG00000016885	XRN1	99	59.387	ENSPNAG00000023531	xrn1	99	59.469	Pygocentrus_nattereri
ENSMLUG00000016885	XRN1	100	86.655	ENSRNOG00000042951	Xrn1	100	86.655	Rattus_norvegicus
ENSMLUG00000016885	XRN1	100	88.741	ENSRBIG00000041227	XRN1	100	88.857	Rhinopithecus_bieti
ENSMLUG00000016885	XRN1	66	54.496	YGL173C	XRN1	81	34.694	Saccharomyces_cerevisiae
ENSMLUG00000016885	XRN1	100	89.088	ENSSBOG00000029561	XRN1	100	89.088	Saimiri_boliviensis_boliviensis
ENSMLUG00000016885	XRN1	99	79.522	ENSSHAG00000016207	XRN1	100	79.522	Sarcophilus_harrisii
ENSMLUG00000016885	XRN1	100	61.494	ENSSFOG00015024211	xrn1	100	61.552	Scleropages_formosus
ENSMLUG00000016885	XRN1	98	66.787	ENSSMAG00000016534	xrn1	100	66.787	Scophthalmus_maximus
ENSMLUG00000016885	XRN1	86	72.254	ENSSDUG00000010306	xrn1	95	72.254	Seriola_dumerili
ENSMLUG00000016885	XRN1	94	70.497	ENSSLDG00000021543	xrn1	100	70.497	Seriola_lalandi_dorsalis
ENSMLUG00000016885	XRN1	65	83.781	ENSSARG00000007741	-	81	83.781	Sorex_araneus
ENSMLUG00000016885	XRN1	100	75.949	ENSTGUG00000008498	XRN1	100	76.007	Taeniopygia_guttata
ENSMLUG00000016885	XRN1	94	69.372	ENSTRUG00000004895	xrn1	96	75.105	Takifugu_rubripes
ENSMLUG00000016885	XRN1	100	56.989	ENSTNIG00000017615	xrn1	100	57.425	Tetraodon_nigroviridis
ENSMLUG00000016885	XRN1	85	96.496	ENSTBEG00000003256	XRN1	89	86.284	Tupaia_belangeri
ENSMLUG00000016885	XRN1	100	85.321	ENSTTRG00000012914	XRN1	100	85.321	Tursiops_truncatus
ENSMLUG00000016885	XRN1	100	90.767	ENSUAMG00000001608	XRN1	98	96.262	Ursus_americanus
ENSMLUG00000016885	XRN1	100	92.614	ENSUMAG00000013625	XRN1	100	92.787	Ursus_maritimus
ENSMLUG00000016885	XRN1	100	86.533	ENSVPAG00000004690	XRN1	100	86.648	Vicugna_pacos
ENSMLUG00000016885	XRN1	100	92.263	ENSVVUG00000024461	XRN1	99	96.820	Vulpes_vulpes
ENSMLUG00000016885	XRN1	100	66.912	ENSXETG00000000619	xrn1	99	89.062	Xenopus_tropicalis
ENSMLUG00000016885	XRN1	100	59.568	ENSXCOG00000007917	xrn1	100	59.705	Xiphophorus_couchianus
ENSMLUG00000016885	XRN1	90	71.801	ENSXMAG00000018320	xrn1	98	71.964	Xiphophorus_maculatus