EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000017130 (Gene tree)
Gene ID: 102419918
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 411606 bases
Position: chrGL429840:192830-604435
Accession: 102419918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000015627	TUDOR	PF00567.24	9.8e-28	1	1
ENSMLUP00000015627	SNase	PF00565.17	1.3e-68	1	5
ENSMLUP00000015627	SNase	PF00565.17	1.3e-68	2	5
ENSMLUP00000015627	SNase	PF00565.17	1.3e-68	3	5
ENSMLUP00000015627	SNase	PF00565.17	1.3e-68	4	5
ENSMLUP00000015627	SNase	PF00565.17	1.3e-68	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000017140	SND1-201	2691	XM_006090488	ENSMLUP00000015627	896 (aa)	XP_006090550	G1PW66

Gene Model

Click here to download ENSMLUG00000017130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000017130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000017130	SND1	99	97.207	ENSG00000197157	SND1	100	98.621	Homo_sapiens
ENSMLUG00000017130	SND1	99	83.055	ENSAPOG00000017599	snd1	97	83.724	Acanthochromis_polyacanthus
ENSMLUG00000017130	SND1	99	97.430	ENSAMEG00000004664	SND1	92	97.430	Ailuropoda_melanoleuca
ENSMLUG00000017130	SND1	99	80.915	ENSACIG00000003551	snd1	97	80.915	Amphilophus_citrinellus
ENSMLUG00000017130	SND1	99	82.832	ENSAOCG00000014166	snd1	97	83.501	Amphiprion_ocellaris
ENSMLUG00000017130	SND1	99	82.832	ENSAPEG00000007067	snd1	97	83.501	Amphiprion_percula
ENSMLUG00000017130	SND1	98	82.955	ENSATEG00000018475	snd1	87	82.955	Anabas_testudineus
ENSMLUG00000017130	SND1	99	97.318	ENSANAG00000034463	SND1	99	97.318	Aotus_nancymaae
ENSMLUG00000017130	SND1	99	83.166	ENSACLG00000022897	snd1	97	83.166	Astatotilapia_calliptera
ENSMLUG00000017130	SND1	99	83.871	ENSAMXG00000016318	snd1	97	83.871	Astyanax_mexicanus
ENSMLUG00000017130	SND1	99	97.095	ENSBTAG00000010692	SND1	97	97.095	Bos_taurus
ENSMLUG00000017130	SND1	99	46.366	WBGene00006626	tsn-1	97	46.476	Caenorhabditis_elegans
ENSMLUG00000017130	SND1	99	97.318	ENSCJAG00000017668	SND1	99	97.318	Callithrix_jacchus
ENSMLUG00000017130	SND1	99	97.430	ENSCAFG00000001700	SND1	97	97.430	Canis_familiaris
ENSMLUG00000017130	SND1	99	97.430	ENSCAFG00020021639	SND1	97	97.430	Canis_lupus_dingo
ENSMLUG00000017130	SND1	99	97.207	ENSCHIG00000023390	SND1	98	97.207	Capra_hircus
ENSMLUG00000017130	SND1	71	98.421	ENSTSYG00000004979	SND1	96	98.421	Carlito_syrichta
ENSMLUG00000017130	SND1	100	84.187	ENSCAPG00000010677	SND1	98	84.187	Cavia_aperea
ENSMLUG00000017130	SND1	99	96.201	ENSCPOG00000006251	SND1	97	96.201	Cavia_porcellus
ENSMLUG00000017130	SND1	99	97.430	ENSCCAG00000036847	SND1	98	97.430	Cebus_capucinus
ENSMLUG00000017130	SND1	99	97.318	ENSCATG00000035214	SND1	99	97.318	Cercocebus_atys
ENSMLUG00000017130	SND1	99	96.760	ENSCLAG00000011796	SND1	97	96.760	Chinchilla_lanigera
ENSMLUG00000017130	SND1	99	97.318	ENSCSAG00000010182	SND1	97	97.318	Chlorocebus_sabaeus
ENSMLUG00000017130	SND1	79	91.176	ENSCHOG00000002218	SND1	86	91.176	Choloepus_hoffmanni
ENSMLUG00000017130	SND1	99	91.508	ENSCPBG00000018094	SND1	97	91.508	Chrysemys_picta_bellii
ENSMLUG00000017130	SND1	99	56.057	ENSCING00000000524	-	97	56.057	Ciona_intestinalis
ENSMLUG00000017130	SND1	99	57.603	ENSCSAVG00000008807	-	97	57.603	Ciona_savignyi
ENSMLUG00000017130	SND1	99	97.318	ENSCANG00000035119	SND1	97	97.318	Colobus_angolensis_palliatus
ENSMLUG00000017130	SND1	99	95.866	ENSCGRG00001022514	Snd1	97	95.866	Cricetulus_griseus_chok1gshd
ENSMLUG00000017130	SND1	100	95.759	ENSCGRG00000012277	Snd1	99	95.759	Cricetulus_griseus_crigri
ENSMLUG00000017130	SND1	99	82.497	ENSCSEG00000008661	snd1	97	83.166	Cynoglossus_semilaevis
ENSMLUG00000017130	SND1	99	84.058	ENSCVAG00000010316	snd1	100	82.520	Cyprinodon_variegatus
ENSMLUG00000017130	SND1	99	84.410	ENSDARG00000006766	snd1	94	88.931	Danio_rerio
ENSMLUG00000017130	SND1	99	94.637	ENSDNOG00000006795	SND1	99	94.637	Dasypus_novemcinctus
ENSMLUG00000017130	SND1	99	97.207	ENSDORG00000000336	Snd1	97	97.207	Dipodomys_ordii
ENSMLUG00000017130	SND1	99	50.654	FBgn0035121	Tudor-SN	97	50.710	Drosophila_melanogaster
ENSMLUG00000017130	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSMLUG00000017130	SND1	58	67.204	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSMLUG00000017130	SND1	99	95.719	ENSEASG00005008513	SND1	97	95.719	Equus_asinus_asinus
ENSMLUG00000017130	SND1	99	97.430	ENSECAG00000011451	SND1	97	97.430	Equus_caballus
ENSMLUG00000017130	SND1	99	85.028	ENSEEUG00000014737	SND1	97	85.028	Erinaceus_europaeus
ENSMLUG00000017130	SND1	99	81.605	ENSELUG00000001805	snd1	94	82.274	Esox_lucius
ENSMLUG00000017130	SND1	99	97.430	ENSFCAG00000008289	SND1	97	97.430	Felis_catus
ENSMLUG00000017130	SND1	99	96.760	ENSFDAG00000015881	SND1	97	96.760	Fukomys_damarensis
ENSMLUG00000017130	SND1	99	81.788	ENSFHEG00000004093	snd1	96	83.508	Fundulus_heteroclitus
ENSMLUG00000017130	SND1	71	72.452	ENSGMOG00000018932	snd1	63	72.452	Gadus_morhua
ENSMLUG00000017130	SND1	99	83.389	ENSGAFG00000008421	snd1	99	84.058	Gambusia_affinis
ENSMLUG00000017130	SND1	99	53.363	ENSGACG00000019793	snd1	97	53.363	Gasterosteus_aculeatus
ENSMLUG00000017130	SND1	99	97.318	ENSGGOG00000009614	SND1	99	97.318	Gorilla_gorilla
ENSMLUG00000017130	SND1	99	83.166	ENSHBUG00000019135	snd1	97	83.166	Haplochromis_burtoni
ENSMLUG00000017130	SND1	99	96.648	ENSHGLG00000003618	SND1	97	96.648	Heterocephalus_glaber_female
ENSMLUG00000017130	SND1	99	96.648	ENSHGLG00100012449	SND1	98	96.648	Heterocephalus_glaber_male
ENSMLUG00000017130	SND1	99	82.943	ENSHCOG00000005266	snd1	97	82.943	Hippocampus_comes
ENSMLUG00000017130	SND1	99	82.759	ENSIPUG00000013279	snd1	97	82.759	Ictalurus_punctatus
ENSMLUG00000017130	SND1	99	97.207	ENSSTOG00000002140	SND1	97	97.207	Ictidomys_tridecemlineatus
ENSMLUG00000017130	SND1	99	96.983	ENSJJAG00000009561	Snd1	97	96.983	Jaculus_jaculus
ENSMLUG00000017130	SND1	99	83.166	ENSKMAG00000016997	snd1	97	83.835	Kryptolebias_marmoratus
ENSMLUG00000017130	SND1	99	86.189	ENSLBEG00000013563	snd1	97	86.189	Labrus_bergylta
ENSMLUG00000017130	SND1	99	84.862	ENSLOCG00000015537	snd1	97	84.862	Lepisosteus_oculatus
ENSMLUG00000017130	SND1	99	96.760	ENSLAFG00000009696	SND1	97	96.760	Loxodonta_africana
ENSMLUG00000017130	SND1	99	97.318	ENSMFAG00000038114	SND1	99	97.318	Macaca_fascicularis
ENSMLUG00000017130	SND1	99	97.318	ENSMMUG00000015432	SND1	97	97.318	Macaca_mulatta
ENSMLUG00000017130	SND1	99	97.318	ENSMNEG00000039808	SND1	99	97.318	Macaca_nemestrina
ENSMLUG00000017130	SND1	99	97.207	ENSMLEG00000029040	SND1	99	97.207	Mandrillus_leucophaeus
ENSMLUG00000017130	SND1	99	83.389	ENSMAMG00000011739	snd1	97	83.389	Mastacembelus_armatus
ENSMLUG00000017130	SND1	99	83.166	ENSMZEG00005005681	snd1	97	83.166	Maylandia_zebra
ENSMLUG00000017130	SND1	99	97.318	ENSMICG00000000097	SND1	97	97.318	Microcebus_murinus
ENSMLUG00000017130	SND1	99	96.425	ENSMOCG00000005040	Snd1	97	96.425	Microtus_ochrogaster
ENSMLUG00000017130	SND1	99	82.609	ENSMMOG00000001795	snd1	97	83.278	Mola_mola
ENSMLUG00000017130	SND1	99	94.525	ENSMODG00000015182	SND1	97	94.525	Monodelphis_domestica
ENSMLUG00000017130	SND1	99	82.943	ENSMALG00000012071	snd1	97	82.943	Monopterus_albus
ENSMLUG00000017130	SND1	99	96.201	MGP_CAROLIEiJ_G0028159	Snd1	97	96.201	Mus_caroli
ENSMLUG00000017130	SND1	99	95.978	ENSMUSG00000001424	Snd1	97	95.978	Mus_musculus
ENSMLUG00000017130	SND1	99	96.089	MGP_PahariEiJ_G0021917	Snd1	96	97.540	Mus_pahari
ENSMLUG00000017130	SND1	99	96.201	MGP_SPRETEiJ_G0029159	Snd1	97	96.201	Mus_spretus
ENSMLUG00000017130	SND1	99	96.872	ENSMPUG00000006545	SND1	97	96.872	Mustela_putorius_furo
ENSMLUG00000017130	SND1	99	96.425	ENSNGAG00000011186	Snd1	97	96.425	Nannospalax_galili
ENSMLUG00000017130	SND1	99	83.055	ENSNBRG00000006681	snd1	97	83.055	Neolamprologus_brichardi
ENSMLUG00000017130	SND1	99	97.318	ENSNLEG00000012263	SND1	99	97.318	Nomascus_leucogenys
ENSMLUG00000017130	SND1	92	100.000	ENSOPRG00000013405	SND1	90	100.000	Ochotona_princeps
ENSMLUG00000017130	SND1	99	96.760	ENSODEG00000011502	SND1	97	96.760	Octodon_degus
ENSMLUG00000017130	SND1	99	83.055	ENSONIG00000011481	snd1	95	83.055	Oreochromis_niloticus
ENSMLUG00000017130	SND1	99	93.184	ENSOANG00000000817	SND1	97	93.184	Ornithorhynchus_anatinus
ENSMLUG00000017130	SND1	99	95.642	ENSOCUG00000001620	SND1	97	95.642	Oryctolagus_cuniculus
ENSMLUG00000017130	SND1	99	82.943	ENSORLG00000015201	snd1	97	82.943	Oryzias_latipes
ENSMLUG00000017130	SND1	99	83.055	ENSORLG00020013991	snd1	97	83.055	Oryzias_latipes_hni
ENSMLUG00000017130	SND1	99	83.055	ENSORLG00015012436	snd1	97	83.055	Oryzias_latipes_hsok
ENSMLUG00000017130	SND1	99	83.278	ENSOMEG00000006406	snd1	97	83.278	Oryzias_melastigma
ENSMLUG00000017130	SND1	99	97.318	ENSOGAG00000013356	SND1	92	97.318	Otolemur_garnettii
ENSMLUG00000017130	SND1	99	94.302	ENSOARG00000002149	SND1	99	94.302	Ovis_aries
ENSMLUG00000017130	SND1	99	97.207	ENSPPAG00000042947	SND1	99	97.207	Pan_paniscus
ENSMLUG00000017130	SND1	99	97.430	ENSPPRG00000004494	SND1	97	97.430	Panthera_pardus
ENSMLUG00000017130	SND1	99	97.318	ENSPTIG00000014214	SND1	97	97.318	Panthera_tigris_altaica
ENSMLUG00000017130	SND1	99	97.207	ENSPTRG00000023911	SND1	99	97.207	Pan_troglodytes
ENSMLUG00000017130	SND1	99	97.318	ENSPANG00000011997	SND1	99	97.318	Papio_anubis
ENSMLUG00000017130	SND1	99	80.552	ENSPKIG00000023494	snd1	97	80.552	Paramormyrops_kingsleyae
ENSMLUG00000017130	SND1	94	81.797	ENSPMGG00000003629	snd1	100	81.797	Periophthalmus_magnuspinnatus
ENSMLUG00000017130	SND1	99	96.313	ENSPEMG00000010240	Snd1	97	96.313	Peromyscus_maniculatus_bairdii
ENSMLUG00000017130	SND1	99	72.879	ENSPMAG00000007915	-	99	72.879	Petromyzon_marinus
ENSMLUG00000017130	SND1	99	94.860	ENSPCIG00000011561	SND1	97	94.860	Phascolarctos_cinereus
ENSMLUG00000017130	SND1	99	83.055	ENSPFOG00000001557	snd1	97	83.724	Poecilia_formosa
ENSMLUG00000017130	SND1	99	83.055	ENSPLAG00000018459	snd1	94	83.724	Poecilia_latipinna
ENSMLUG00000017130	SND1	99	83.501	ENSPMEG00000006803	snd1	97	84.169	Poecilia_mexicana
ENSMLUG00000017130	SND1	99	83.166	ENSPREG00000002189	snd1	97	83.835	Poecilia_reticulata
ENSMLUG00000017130	SND1	93	97.219	ENSPPYG00000017972	SND1	97	97.219	Pongo_abelii
ENSMLUG00000017130	SND1	99	83.911	ENSPCAG00000011305	SND1	97	84.581	Procavia_capensis
ENSMLUG00000017130	SND1	100	96.987	ENSPCOG00000026791	SND1	99	97.095	Propithecus_coquereli
ENSMLUG00000017130	SND1	99	95.196	ENSPVAG00000013945	SND1	97	95.196	Pteropus_vampyrus
ENSMLUG00000017130	SND1	99	83.166	ENSPNYG00000000932	snd1	97	83.166	Pundamilia_nyererei
ENSMLUG00000017130	SND1	99	83.426	ENSPNAG00000001206	snd1	97	83.426	Pygocentrus_nattereri
ENSMLUG00000017130	SND1	99	95.866	ENSRNOG00000031173	Snd1	99	94.525	Rattus_norvegicus
ENSMLUG00000017130	SND1	71	99.057	ENSRBIG00000027782	-	93	99.048	Rhinopithecus_bieti
ENSMLUG00000017130	SND1	99	97.318	ENSRROG00000033020	SND1	97	97.318	Rhinopithecus_roxellana
ENSMLUG00000017130	SND1	99	97.318	ENSSBOG00000032461	SND1	99	97.318	Saimiri_boliviensis_boliviensis
ENSMLUG00000017130	SND1	100	91.853	ENSSHAG00000015359	SND1	99	91.853	Sarcophilus_harrisii
ENSMLUG00000017130	SND1	99	82.522	ENSSFOG00015001103	snd1	97	82.522	Scleropages_formosus
ENSMLUG00000017130	SND1	99	82.497	ENSSMAG00000001932	snd1	92	82.497	Scophthalmus_maximus
ENSMLUG00000017130	SND1	99	83.501	ENSSDUG00000002699	snd1	91	83.501	Seriola_dumerili
ENSMLUG00000017130	SND1	99	76.143	ENSSLDG00000001950	snd1	97	76.143	Seriola_lalandi_dorsalis
ENSMLUG00000017130	SND1	89	98.113	ENSSARG00000004877	SND1	92	98.113	Sorex_araneus
ENSMLUG00000017130	SND1	71	87.652	ENSSPUG00000017586	SND1	96	87.652	Sphenodon_punctatus
ENSMLUG00000017130	SND1	71	86.420	ENSSPAG00000021398	snd1	95	86.420	Stegastes_partitus
ENSMLUG00000017130	SND1	99	96.983	ENSSSCG00000016590	SND1	97	96.983	Sus_scrofa
ENSMLUG00000017130	SND1	99	84.314	ENSTRUG00000014067	snd1	97	82.497	Takifugu_rubripes
ENSMLUG00000017130	SND1	99	83.055	ENSTNIG00000011019	snd1	94	86.911	Tetraodon_nigroviridis
ENSMLUG00000017130	SND1	96	91.502	ENSTBEG00000003999	SND1	100	91.502	Tupaia_belangeri
ENSMLUG00000017130	SND1	100	92.291	ENSTTRG00000006059	SND1	97	92.291	Tursiops_truncatus
ENSMLUG00000017130	SND1	93	96.276	ENSUAMG00000005604	-	93	96.276	Ursus_americanus
ENSMLUG00000017130	SND1	68	89.136	ENSUAMG00000002820	-	83	89.136	Ursus_americanus
ENSMLUG00000017130	SND1	99	97.318	ENSUMAG00000005960	SND1	97	97.318	Ursus_maritimus
ENSMLUG00000017130	SND1	74	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSMLUG00000017130	SND1	99	97.207	ENSVVUG00000007226	SND1	97	97.207	Vulpes_vulpes
ENSMLUG00000017130	SND1	99	82.609	ENSXETG00000023043	snd1	100	83.277	Xenopus_tropicalis
ENSMLUG00000017130	SND1	95	79.601	ENSXCOG00000013629	snd1	99	80.305	Xiphophorus_couchianus
ENSMLUG00000017130	SND1	99	83.389	ENSXMAG00000011469	snd1	97	84.058	Xiphophorus_maculatus