EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000017159 (Gene tree)
Gene ID: 102439158
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 34883 bases
Position: chrGL430043:98804-133686
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000015649	ResIII	PF04851.15	6.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000017165	SBNO1-201	4179	XM_006099494	ENSMLUP00000015649	1392 (aa)	-	G1PW87

Gene Model

Click here to download ENSMLUG00000017159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000017159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000017159	SBNO1	100	97.775	ENSG00000139697	SBNO1	100	97.775	Homo_sapiens
ENSMLUG00000017159	SBNO1	82	80.911	ENSAPOG00000003196	sbno1	98	80.997	Acanthochromis_polyacanthus
ENSMLUG00000017159	SBNO1	100	97.994	ENSAMEG00000015151	SBNO1	100	97.994	Ailuropoda_melanoleuca
ENSMLUG00000017159	SBNO1	99	74.314	ENSACIG00000008088	sbno1	99	73.840	Amphilophus_citrinellus
ENSMLUG00000017159	SBNO1	99	74.789	ENSAOCG00000014859	sbno1	99	74.965	Amphiprion_ocellaris
ENSMLUG00000017159	SBNO1	99	74.789	ENSAPEG00000006069	sbno1	99	74.965	Amphiprion_percula
ENSMLUG00000017159	SBNO1	99	75.560	ENSATEG00000006667	sbno1	99	75.630	Anabas_testudineus
ENSMLUG00000017159	SBNO1	100	91.816	ENSAPLG00000015674	SBNO1	100	91.822	Anas_platyrhynchos
ENSMLUG00000017159	SBNO1	100	87.287	ENSACAG00000015441	SBNO1	88	87.287	Anolis_carolinensis
ENSMLUG00000017159	SBNO1	100	97.487	ENSANAG00000029958	-	100	97.487	Aotus_nancymaae
ENSMLUG00000017159	SBNO1	99	73.997	ENSACLG00000024913	sbno1	99	74.355	Astatotilapia_calliptera
ENSMLUG00000017159	SBNO1	99	79.048	ENSAMXG00000019473	sbno1	99	79.433	Astyanax_mexicanus
ENSMLUG00000017159	SBNO1	99	98.348	ENSBTAG00000020505	SBNO1	99	98.348	Bos_taurus
ENSMLUG00000017159	SBNO1	100	97.631	ENSCJAG00000016599	SBNO1	100	97.631	Callithrix_jacchus
ENSMLUG00000017159	SBNO1	100	97.921	ENSCAFG00000007503	SBNO1	100	97.921	Canis_familiaris
ENSMLUG00000017159	SBNO1	100	97.200	ENSCAFG00020015363	SBNO1	100	97.200	Canis_lupus_dingo
ENSMLUG00000017159	SBNO1	99	98.132	ENSCHIG00000008382	SBNO1	99	98.132	Capra_hircus
ENSMLUG00000017159	SBNO1	100	97.918	ENSTSYG00000012749	SBNO1	100	97.918	Carlito_syrichta
ENSMLUG00000017159	SBNO1	96	97.671	ENSCAPG00000000384	SBNO1	100	97.671	Cavia_aperea
ENSMLUG00000017159	SBNO1	100	96.913	ENSCPOG00000008109	SBNO1	99	98.553	Cavia_porcellus
ENSMLUG00000017159	SBNO1	100	93.257	ENSCCAG00000035316	SBNO1	100	93.257	Cebus_capucinus
ENSMLUG00000017159	SBNO1	99	95.824	ENSCATG00000008239	SBNO1	98	98.553	Cercocebus_atys
ENSMLUG00000017159	SBNO1	100	97.128	ENSCLAG00000008995	SBNO1	99	98.553	Chinchilla_lanigera
ENSMLUG00000017159	SBNO1	83	98.532	ENSCSAG00000002064	SBNO1	100	98.532	Chlorocebus_sabaeus
ENSMLUG00000017159	SBNO1	96	94.327	ENSCHOG00000008814	SBNO1	96	94.327	Choloepus_hoffmanni
ENSMLUG00000017159	SBNO1	100	92.109	ENSCPBG00000025968	SBNO1	99	91.966	Chrysemys_picta_bellii
ENSMLUG00000017159	SBNO1	100	92.258	ENSCANG00000042688	-	100	92.186	Colobus_angolensis_palliatus
ENSMLUG00000017159	SBNO1	100	96.985	ENSCGRG00001017470	Sbno1	100	96.985	Cricetulus_griseus_chok1gshd
ENSMLUG00000017159	SBNO1	100	96.985	ENSCGRG00000004756	Sbno1	100	96.985	Cricetulus_griseus_crigri
ENSMLUG00000017159	SBNO1	99	74.175	ENSCSEG00000011919	sbno1	99	74.912	Cynoglossus_semilaevis
ENSMLUG00000017159	SBNO1	99	75.404	ENSCVAG00000007038	sbno1	99	75.966	Cyprinodon_variegatus
ENSMLUG00000017159	SBNO1	99	79.128	ENSDARG00000099080	sbno1	99	79.271	Danio_rerio
ENSMLUG00000017159	SBNO1	100	97.306	ENSDNOG00000017147	SBNO1	98	98.047	Dasypus_novemcinctus
ENSMLUG00000017159	SBNO1	100	83.656	ENSDORG00000015261	Sbno1	100	83.656	Dipodomys_ordii
ENSMLUG00000017159	SBNO1	93	90.481	ENSETEG00000005620	SBNO1	93	90.481	Echinops_telfairi
ENSMLUG00000017159	SBNO1	75	62.570	ENSEBUG00000013823	sbno1	93	62.162	Eptatretus_burgeri
ENSMLUG00000017159	SBNO1	51	94.076	ENSEASG00005012595	-	92	94.076	Equus_asinus_asinus
ENSMLUG00000017159	SBNO1	100	98.492	ENSECAG00000006127	SBNO1	100	98.492	Equus_caballus
ENSMLUG00000017159	SBNO1	83	98.901	ENSEEUG00000003793	SBNO1	83	98.901	Erinaceus_europaeus
ENSMLUG00000017159	SBNO1	99	77.707	ENSELUG00000002886	sbno1	99	77.778	Esox_lucius
ENSMLUG00000017159	SBNO1	99	98.420	ENSFCAG00000015331	SBNO1	99	98.420	Felis_catus
ENSMLUG00000017159	SBNO1	100	91.816	ENSFALG00000009273	SBNO1	100	91.894	Ficedula_albicollis
ENSMLUG00000017159	SBNO1	99	95.758	ENSFDAG00000014232	SBNO1	99	95.758	Fukomys_damarensis
ENSMLUG00000017159	SBNO1	99	75.424	ENSFHEG00000007360	sbno1	99	75.706	Fundulus_heteroclitus
ENSMLUG00000017159	SBNO1	94	78.403	ENSGMOG00000018229	sbno1	99	78.588	Gadus_morhua
ENSMLUG00000017159	SBNO1	88	92.451	ENSGALG00000003392	SBNO1	99	92.289	Gallus_gallus
ENSMLUG00000017159	SBNO1	99	75.617	ENSGAFG00000003960	sbno1	99	75.862	Gambusia_affinis
ENSMLUG00000017159	SBNO1	94	78.566	ENSGACG00000015633	sbno1	99	78.642	Gasterosteus_aculeatus
ENSMLUG00000017159	SBNO1	100	91.248	ENSGAGG00000001065	SBNO1	99	94.213	Gopherus_agassizii
ENSMLUG00000017159	SBNO1	100	97.631	ENSGGOG00000015000	SBNO1	100	97.631	Gorilla_gorilla
ENSMLUG00000017159	SBNO1	99	68.594	ENSHBUG00000011910	sbno1	99	68.951	Haplochromis_burtoni
ENSMLUG00000017159	SBNO1	100	97.200	ENSHGLG00000014165	-	99	98.553	Heterocephalus_glaber_female
ENSMLUG00000017159	SBNO1	91	84.387	ENSHCOG00000003246	sbno1	95	84.387	Hippocampus_comes
ENSMLUG00000017159	SBNO1	99	78.622	ENSIPUG00000015830	Sbno1	98	78.846	Ictalurus_punctatus
ENSMLUG00000017159	SBNO1	100	97.846	ENSSTOG00000023221	SBNO1	100	97.846	Ictidomys_tridecemlineatus
ENSMLUG00000017159	SBNO1	100	97.344	ENSJJAG00000001741	Sbno1	100	97.344	Jaculus_jaculus
ENSMLUG00000017159	SBNO1	99	75.282	ENSKMAG00000009696	sbno1	99	75.353	Kryptolebias_marmoratus
ENSMLUG00000017159	SBNO1	99	75.402	ENSLBEG00000007623	sbno1	99	75.698	Labrus_bergylta
ENSMLUG00000017159	SBNO1	99	81.447	ENSLACG00000017227	SBNO1	99	83.806	Latimeria_chalumnae
ENSMLUG00000017159	SBNO1	99	81.889	ENSLOCG00000005725	sbno1	97	81.734	Lepisosteus_oculatus
ENSMLUG00000017159	SBNO1	100	96.770	ENSLAFG00000002135	SBNO1	100	96.770	Loxodonta_africana
ENSMLUG00000017159	SBNO1	100	97.631	ENSMFAG00000031429	SBNO1	100	97.631	Macaca_fascicularis
ENSMLUG00000017159	SBNO1	100	97.631	ENSMMUG00000011496	SBNO1	100	97.631	Macaca_mulatta
ENSMLUG00000017159	SBNO1	100	95.908	ENSMLEG00000033260	SBNO1	99	98.553	Mandrillus_leucophaeus
ENSMLUG00000017159	SBNO1	99	75.476	ENSMAMG00000005473	sbno1	99	75.617	Mastacembelus_armatus
ENSMLUG00000017159	SBNO1	100	91.888	ENSMGAG00000003274	SBNO1	100	91.966	Meleagris_gallopavo
ENSMLUG00000017159	SBNO1	50	92.847	ENSMAUG00000004834	-	100	92.847	Mesocricetus_auratus
ENSMLUG00000017159	SBNO1	100	96.913	ENSMICG00000006573	-	100	96.913	Microcebus_murinus
ENSMLUG00000017159	SBNO1	100	93.405	ENSMOCG00000009390	Sbno1	100	96.797	Microtus_ochrogaster
ENSMLUG00000017159	SBNO1	99	71.106	ENSMMOG00000008691	sbno1	99	71.499	Mola_mola
ENSMLUG00000017159	SBNO1	99	94.397	ENSMODG00000012470	SBNO1	98	94.397	Monodelphis_domestica
ENSMLUG00000017159	SBNO1	99	75.000	ENSMALG00000001056	sbno1	99	74.930	Monopterus_albus
ENSMLUG00000017159	SBNO1	99	96.839	MGP_CAROLIEiJ_G0027749	Sbno1	99	96.839	Mus_caroli
ENSMLUG00000017159	SBNO1	99	97.342	ENSMUSG00000038095	Sbno1	100	96.950	Mus_musculus
ENSMLUG00000017159	SBNO1	99	97.198	MGP_PahariEiJ_G0024329	Sbno1	100	96.823	Mus_pahari
ENSMLUG00000017159	SBNO1	99	97.126	MGP_SPRETEiJ_G0028747	Sbno1	99	97.126	Mus_spretus
ENSMLUG00000017159	SBNO1	100	98.277	ENSMPUG00000001658	SBNO1	100	98.277	Mustela_putorius_furo
ENSMLUG00000017159	SBNO1	100	97.775	ENSNGAG00000012620	Sbno1	100	97.775	Nannospalax_galili
ENSMLUG00000017159	SBNO1	99	74.087	ENSNBRG00000019189	sbno1	99	74.445	Neolamprologus_brichardi
ENSMLUG00000017159	SBNO1	100	93.898	ENSNLEG00000001502	SBNO1	100	93.898	Nomascus_leucogenys
ENSMLUG00000017159	SBNO1	62	84.177	ENSMEUG00000008768	-	93	88.608	Notamacropus_eugenii
ENSMLUG00000017159	SBNO1	100	94.265	ENSOPRG00000011054	SBNO1	100	94.194	Ochotona_princeps
ENSMLUG00000017159	SBNO1	100	97.057	ENSODEG00000009997	SBNO1	100	97.057	Octodon_degus
ENSMLUG00000017159	SBNO1	99	75.282	ENSONIG00000015348	sbno1	99	75.634	Oreochromis_niloticus
ENSMLUG00000017159	SBNO1	98	96.134	ENSOCUG00000002441	SBNO1	95	96.134	Oryctolagus_cuniculus
ENSMLUG00000017159	SBNO1	99	74.684	ENSORLG00000001593	sbno1	99	75.236	Oryzias_latipes
ENSMLUG00000017159	SBNO1	99	74.806	ENSORLG00020015216	sbno1	99	75.176	Oryzias_latipes_hni
ENSMLUG00000017159	SBNO1	99	74.806	ENSORLG00015002726	sbno1	99	75.176	Oryzias_latipes_hsok
ENSMLUG00000017159	SBNO1	99	74.772	ENSOMEG00000019313	sbno1	99	74.860	Oryzias_melastigma
ENSMLUG00000017159	SBNO1	50	89.557	ENSOGAG00000010781	-	100	89.986	Otolemur_garnettii
ENSMLUG00000017159	SBNO1	99	97.920	ENSOARG00000004404	SBNO1	99	97.920	Ovis_aries
ENSMLUG00000017159	SBNO1	100	97.775	ENSPPAG00000024635	SBNO1	100	97.775	Pan_paniscus
ENSMLUG00000017159	SBNO1	99	98.420	ENSPPRG00000022092	SBNO1	99	98.420	Panthera_pardus
ENSMLUG00000017159	SBNO1	100	98.205	ENSPTIG00000017803	SBNO1	100	98.205	Panthera_tigris_altaica
ENSMLUG00000017159	SBNO1	100	97.846	ENSPTRG00000005597	SBNO1	100	97.846	Pan_troglodytes
ENSMLUG00000017159	SBNO1	100	97.631	ENSPANG00000011640	SBNO1	100	97.631	Papio_anubis
ENSMLUG00000017159	SBNO1	99	80.486	ENSPKIG00000001441	sbno1	99	80.714	Paramormyrops_kingsleyae
ENSMLUG00000017159	SBNO1	100	91.149	ENSPSIG00000009572	-	100	91.137	Pelodiscus_sinensis
ENSMLUG00000017159	SBNO1	92	88.034	ENSPSIG00000009256	-	100	88.034	Pelodiscus_sinensis
ENSMLUG00000017159	SBNO1	100	96.841	ENSPEMG00000016087	Sbno1	100	96.841	Peromyscus_maniculatus_bairdii
ENSMLUG00000017159	SBNO1	99	93.754	ENSPCIG00000010985	SBNO1	99	93.970	Phascolarctos_cinereus
ENSMLUG00000017159	SBNO1	99	75.915	ENSPFOG00000005069	sbno1	99	76.160	Poecilia_formosa
ENSMLUG00000017159	SBNO1	99	75.704	ENSPLAG00000015015	sbno1	99	76.197	Poecilia_latipinna
ENSMLUG00000017159	SBNO1	99	75.862	ENSPMEG00000021212	sbno1	99	76.107	Poecilia_mexicana
ENSMLUG00000017159	SBNO1	99	75.510	ENSPREG00000017746	sbno1	99	75.755	Poecilia_reticulata
ENSMLUG00000017159	SBNO1	100	97.344	ENSPPYG00000005084	SBNO1	100	97.344	Pongo_abelii
ENSMLUG00000017159	SBNO1	89	92.329	ENSPCAG00000008634	SBNO1	88	92.297	Procavia_capensis
ENSMLUG00000017159	SBNO1	100	98.134	ENSPCOG00000024277	SBNO1	100	98.134	Propithecus_coquereli
ENSMLUG00000017159	SBNO1	87	98.611	ENSPVAG00000015304	SBNO1	87	98.611	Pteropus_vampyrus
ENSMLUG00000017159	SBNO1	99	75.388	ENSPNYG00000004291	sbno1	99	75.599	Pundamilia_nyererei
ENSMLUG00000017159	SBNO1	99	78.992	ENSPNAG00000015622	sbno1	99	78.921	Pygocentrus_nattereri
ENSMLUG00000017159	SBNO1	99	97.126	ENSRNOG00000001064	Sbno1	99	97.504	Rattus_norvegicus
ENSMLUG00000017159	SBNO1	100	97.775	ENSRROG00000034230	SBNO1	100	97.775	Rhinopithecus_roxellana
ENSMLUG00000017159	SBNO1	96	92.480	ENSSBOG00000015422	SBNO1	99	92.480	Saimiri_boliviensis_boliviensis
ENSMLUG00000017159	SBNO1	99	79.357	ENSSFOG00015019025	sbno1	99	79.714	Scleropages_formosus
ENSMLUG00000017159	SBNO1	99	75.899	ENSSMAG00000013640	sbno1	99	76.110	Scophthalmus_maximus
ENSMLUG00000017159	SBNO1	99	75.473	ENSSDUG00000023480	sbno1	99	75.473	Seriola_dumerili
ENSMLUG00000017159	SBNO1	99	75.403	ENSSLDG00000007928	sbno1	99	75.403	Seriola_lalandi_dorsalis
ENSMLUG00000017159	SBNO1	89	98.382	ENSSARG00000002594	SBNO1	89	98.382	Sorex_araneus
ENSMLUG00000017159	SBNO1	100	88.737	ENSSPUG00000012640	SBNO1	100	88.953	Sphenodon_punctatus
ENSMLUG00000017159	SBNO1	99	74.685	ENSSPAG00000016244	sbno1	99	74.755	Stegastes_partitus
ENSMLUG00000017159	SBNO1	100	98.277	ENSSSCG00000009776	SBNO1	100	98.277	Sus_scrofa
ENSMLUG00000017159	SBNO1	100	91.744	ENSTGUG00000005380	SBNO1	100	91.822	Taeniopygia_guttata
ENSMLUG00000017159	SBNO1	99	75.282	ENSTRUG00000018490	sbno1	99	75.387	Takifugu_rubripes
ENSMLUG00000017159	SBNO1	56	70.777	ENSTNIG00000013506	sbno1	99	70.844	Tetraodon_nigroviridis
ENSMLUG00000017159	SBNO1	100	98.277	ENSUAMG00000019671	SBNO1	100	98.277	Ursus_americanus
ENSMLUG00000017159	SBNO1	100	98.277	ENSUMAG00000004002	SBNO1	100	98.277	Ursus_maritimus
ENSMLUG00000017159	SBNO1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSMLUG00000017159	SBNO1	100	98.134	ENSVVUG00000027807	SBNO1	100	98.134	Vulpes_vulpes
ENSMLUG00000017159	SBNO1	99	81.571	ENSXETG00000031930	SBNO1	99	81.701	Xenopus_tropicalis
ENSMLUG00000017159	SBNO1	89	74.183	ENSXCOG00000011607	sbno1	99	71.043	Xiphophorus_couchianus
ENSMLUG00000017159	SBNO1	99	75.721	ENSXMAG00000002140	sbno1	99	75.896	Xiphophorus_maculatus