EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000017590 (Gene tree)
Gene ID: 102419058
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 27684 bases
Position: chrGL430438:283043-310726
Accession: 102419058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000016041	GUCT	PF08152.12	2.9e-21	1	1
ENSMLUP00000016041	ResIII	PF04851.15	3.7e-10	1	1
ENSMLUP00000016041	DEAD	PF00270.29	3.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000017595	DDX50-201	2407	XM_006105330	ENSMLUP00000016041	733 (aa)	XP_006105392	G1PX79

Gene Model

Click here to download ENSMLUG00000017590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000017590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000017590	DDX50	56	32.394	ENSMLUG00000003186	DDX27	52	32.160
ENSMLUG00000017590	DDX50	50	33.155	ENSMLUG00000012233	-	86	33.155
ENSMLUG00000017590	DDX50	57	31.059	ENSMLUG00000009496	DDX5	52	33.241
ENSMLUG00000017590	DDX50	52	32.663	ENSMLUG00000003163	DDX47	77	33.696
ENSMLUG00000017590	DDX50	50	32.267	ENSMLUG00000003415	-	87	31.720
ENSMLUG00000017590	DDX50	50	33.596	ENSMLUG00000017607	DDX18	54	33.596
ENSMLUG00000017590	DDX50	50	32.258	ENSMLUG00000016392	EIF4A2	87	31.806
ENSMLUG00000017590	DDX50	87	63.344	ENSMLUG00000023298	DDX21	73	63.301

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000017590	DDX50	100	96.336	ENSG00000107625	DDX50	100	96.336	Homo_sapiens
ENSMLUG00000017590	DDX50	100	95.528	ENSAMEG00000017992	DDX50	100	95.528	Ailuropoda_melanoleuca
ENSMLUG00000017590	DDX50	92	77.504	ENSANAG00000017785	-	91	77.358	Aotus_nancymaae
ENSMLUG00000017590	DDX50	100	95.387	ENSBTAG00000033413	DDX50	92	95.723	Bos_taurus
ENSMLUG00000017590	DDX50	100	96.472	ENSCJAG00000018844	DDX50	100	96.472	Callithrix_jacchus
ENSMLUG00000017590	DDX50	100	96.206	ENSCAFG00000013776	DDX50	100	96.206	Canis_familiaris
ENSMLUG00000017590	DDX50	100	96.206	ENSCAFG00020025977	DDX50	99	96.206	Canis_lupus_dingo
ENSMLUG00000017590	DDX50	100	95.115	ENSCHIG00000000285	DDX50	92	95.428	Capra_hircus
ENSMLUG00000017590	DDX50	92	95.723	ENSTSYG00000004192	DDX50	92	95.723	Carlito_syrichta
ENSMLUG00000017590	DDX50	88	78.882	ENSCAPG00000007230	-	87	78.858	Cavia_aperea
ENSMLUG00000017590	DDX50	91	94.362	ENSCPOG00000002131	-	92	94.395	Cavia_porcellus
ENSMLUG00000017590	DDX50	82	90.110	ENSCCAG00000030543	DDX50	90	90.110	Cebus_capucinus
ENSMLUG00000017590	DDX50	92	66.764	ENSCATG00000039259	-	90	67.009	Cercocebus_atys
ENSMLUG00000017590	DDX50	98	70.776	ENSCATG00000035153	-	89	87.774	Cercocebus_atys
ENSMLUG00000017590	DDX50	99	94.414	ENSCATG00000032463	DDX50	99	94.414	Cercocebus_atys
ENSMLUG00000017590	DDX50	97	69.718	ENSCLAG00000001938	-	91	70.353	Chinchilla_lanigera
ENSMLUG00000017590	DDX50	92	95.280	ENSCLAG00000012957	-	92	95.428	Chinchilla_lanigera
ENSMLUG00000017590	DDX50	50	86.921	ENSCLAG00000001553	-	79	87.987	Chinchilla_lanigera
ENSMLUG00000017590	DDX50	100	96.472	ENSCSAG00000007703	DDX50	100	96.472	Chlorocebus_sabaeus
ENSMLUG00000017590	DDX50	88	94.299	ENSCHOG00000000233	DDX50	97	94.299	Choloepus_hoffmanni
ENSMLUG00000017590	DDX50	96	67.041	ENSCANG00000028077	-	91	67.107	Colobus_angolensis_palliatus
ENSMLUG00000017590	DDX50	100	82.768	ENSCANG00000036450	-	100	82.768	Colobus_angolensis_palliatus
ENSMLUG00000017590	DDX50	86	71.361	ENSCANG00000018820	-	88	72.426	Colobus_angolensis_palliatus
ENSMLUG00000017590	DDX50	92	93.215	ENSCGRG00001020223	Ddx50	92	93.215	Cricetulus_griseus_chok1gshd
ENSMLUG00000017590	DDX50	92	93.333	ENSCGRG00000015884	Ddx50	92	93.215	Cricetulus_griseus_crigri
ENSMLUG00000017590	DDX50	87	89.815	ENSDNOG00000001675	DDX50	100	89.815	Dasypus_novemcinctus
ENSMLUG00000017590	DDX50	92	94.100	ENSDORG00000007310	Ddx50	92	94.100	Dipodomys_ordii
ENSMLUG00000017590	DDX50	82	95.929	ENSETEG00000014069	DDX50	83	95.929	Echinops_telfairi
ENSMLUG00000017590	DDX50	92	95.455	ENSEASG00005015595	DDX50	92	95.575	Equus_asinus_asinus
ENSMLUG00000017590	DDX50	92	95.601	ENSECAG00000023044	DDX50	92	95.723	Equus_caballus
ENSMLUG00000017590	DDX50	89	94.569	ENSEEUG00000005782	DDX50	81	96.825	Erinaceus_europaeus
ENSMLUG00000017590	DDX50	100	96.341	ENSFCAG00000012678	DDX50	99	96.341	Felis_catus
ENSMLUG00000017590	DDX50	92	89.053	ENSFDAG00000016109	-	91	89.053	Fukomys_damarensis
ENSMLUG00000017590	DDX50	51	80.851	ENSGGOG00000041063	-	82	83.596	Gorilla_gorilla
ENSMLUG00000017590	DDX50	100	96.336	ENSGGOG00000010100	DDX50	100	96.336	Gorilla_gorilla
ENSMLUG00000017590	DDX50	52	71.466	ENSGGOG00000022568	-	90	80.000	Gorilla_gorilla
ENSMLUG00000017590	DDX50	92	93.215	ENSHGLG00000013466	DDX50	92	93.215	Heterocephalus_glaber_female
ENSMLUG00000017590	DDX50	82	84.043	ENSHGLG00100006568	-	92	84.043	Heterocephalus_glaber_male
ENSMLUG00000017590	DDX50	92	93.215	ENSHGLG00100017191	DDX50	92	93.215	Heterocephalus_glaber_male
ENSMLUG00000017590	DDX50	100	93.089	ENSSTOG00000021852	-	92	92.931	Ictidomys_tridecemlineatus
ENSMLUG00000017590	DDX50	100	71.255	ENSJJAG00000019626	-	91	71.880	Jaculus_jaculus
ENSMLUG00000017590	DDX50	100	92.537	ENSJJAG00000023928	-	92	92.478	Jaculus_jaculus
ENSMLUG00000017590	DDX50	92	95.723	ENSLAFG00000006186	DDX50	92	95.723	Loxodonta_africana
ENSMLUG00000017590	DDX50	100	96.472	ENSMFAG00000044067	DDX50	100	96.472	Macaca_fascicularis
ENSMLUG00000017590	DDX50	98	70.083	ENSMFAG00000045339	-	89	86.834	Macaca_fascicularis
ENSMLUG00000017590	DDX50	80	68.484	ENSMMUG00000045343	-	80	68.197	Macaca_mulatta
ENSMLUG00000017590	DDX50	100	96.472	ENSMMUG00000001006	DDX50	100	97.321	Macaca_mulatta
ENSMLUG00000017590	DDX50	92	89.941	ENSMNEG00000031664	DDX50	92	89.941	Macaca_nemestrina
ENSMLUG00000017590	DDX50	98	71.448	ENSMNEG00000045530	-	89	88.088	Macaca_nemestrina
ENSMLUG00000017590	DDX50	86	82.009	ENSMLEG00000041988	-	89	85.530	Mandrillus_leucophaeus
ENSMLUG00000017590	DDX50	92	94.395	ENSMLEG00000037313	DDX50	92	94.395	Mandrillus_leucophaeus
ENSMLUG00000017590	DDX50	56	92.010	ENSMAUG00000022192	Ddx50	100	92.010	Mesocricetus_auratus
ENSMLUG00000017590	DDX50	92	88.201	ENSMICG00000017539	DDX50	91	88.201	Microcebus_murinus
ENSMLUG00000017590	DDX50	92	92.794	ENSMOCG00000001676	Ddx50	92	92.794	Microtus_ochrogaster
ENSMLUG00000017590	DDX50	92	78.886	ENSMODG00000010741	DDX50	92	79.300	Monodelphis_domestica
ENSMLUG00000017590	DDX50	92	91.888	MGP_CAROLIEiJ_G0015389	Ddx50	92	92.625	Mus_caroli
ENSMLUG00000017590	DDX50	92	92.183	ENSMUSG00000020076	Ddx50	92	92.773	Mus_musculus
ENSMLUG00000017590	DDX50	92	92.330	MGP_PahariEiJ_G0030805	Ddx50	92	92.920	Mus_pahari
ENSMLUG00000017590	DDX50	92	92.183	MGP_SPRETEiJ_G0016200	Ddx50	92	92.773	Mus_spretus
ENSMLUG00000017590	DDX50	88	95.370	ENSMPUG00000004589	DDX50	99	95.370	Mustela_putorius_furo
ENSMLUG00000017590	DDX50	92	93.953	ENSNGAG00000004283	Ddx50	92	93.953	Nannospalax_galili
ENSMLUG00000017590	DDX50	100	96.336	ENSNLEG00000011631	DDX50	100	96.336	Nomascus_leucogenys
ENSMLUG00000017590	DDX50	89	67.841	ENSNLEG00000035506	-	88	78.683	Nomascus_leucogenys
ENSMLUG00000017590	DDX50	92	91.740	ENSOPRG00000001619	DDX50	92	92.478	Ochotona_princeps
ENSMLUG00000017590	DDX50	92	93.953	ENSODEG00000014597	-	92	94.395	Octodon_degus
ENSMLUG00000017590	DDX50	94	65.759	ENSOANG00000004776	DDX50	76	70.519	Ornithorhynchus_anatinus
ENSMLUG00000017590	DDX50	95	90.818	ENSOCUG00000002879	DDX50	95	93.510	Oryctolagus_cuniculus
ENSMLUG00000017590	DDX50	92	95.575	ENSOGAG00000001844	DDX50	92	95.575	Otolemur_garnettii
ENSMLUG00000017590	DDX50	100	95.115	ENSOARG00000005264	DDX50	92	95.428	Ovis_aries
ENSMLUG00000017590	DDX50	100	96.201	ENSPPAG00000040723	DDX50	100	96.201	Pan_paniscus
ENSMLUG00000017590	DDX50	52	71.429	ENSPPAG00000026788	-	90	79.310	Pan_paniscus
ENSMLUG00000017590	DDX50	100	96.341	ENSPPRG00000015826	DDX50	100	96.341	Panthera_pardus
ENSMLUG00000017590	DDX50	100	96.341	ENSPTIG00000008454	DDX50	100	96.341	Panthera_tigris_altaica
ENSMLUG00000017590	DDX50	52	71.429	ENSPTRG00000044913	-	99	72.487	Pan_troglodytes
ENSMLUG00000017590	DDX50	100	96.201	ENSPTRG00000002562	DDX50	100	96.201	Pan_troglodytes
ENSMLUG00000017590	DDX50	92	88.643	ENSPANG00000022143	-	92	88.643	Papio_anubis
ENSMLUG00000017590	DDX50	92	92.478	ENSPEMG00000020899	-	92	92.478	Peromyscus_maniculatus_bairdii
ENSMLUG00000017590	DDX50	92	78.824	ENSPCIG00000016036	DDX50	94	79.372	Phascolarctos_cinereus
ENSMLUG00000017590	DDX50	91	97.173	ENSPPYG00000002390	DDX50	100	97.173	Pongo_abelii
ENSMLUG00000017590	DDX50	84	81.331	ENSPCAG00000009692	DDX50	100	81.331	Procavia_capensis
ENSMLUG00000017590	DDX50	79	87.879	ENSPCOG00000012574	DDX50	91	87.879	Propithecus_coquereli
ENSMLUG00000017590	DDX50	86	95.592	ENSPVAG00000009519	DDX50	86	95.592	Pteropus_vampyrus
ENSMLUG00000017590	DDX50	92	91.593	ENSRNOG00000000396	Ddx50	92	92.183	Rattus_norvegicus
ENSMLUG00000017590	DDX50	99	65.400	ENSRBIG00000039673	-	90	64.948	Rhinopithecus_bieti
ENSMLUG00000017590	DDX50	99	67.579	ENSRBIG00000036573	-	92	67.857	Rhinopithecus_bieti
ENSMLUG00000017590	DDX50	87	94.868	ENSRBIG00000042841	-	98	96.735	Rhinopithecus_bieti
ENSMLUG00000017590	DDX50	100	96.201	ENSRROG00000032158	DDX50	100	96.880	Rhinopithecus_roxellana
ENSMLUG00000017590	DDX50	52	68.504	ENSRROG00000031940	-	87	73.994	Rhinopithecus_roxellana
ENSMLUG00000017590	DDX50	99	64.256	ENSRROG00000022853	-	91	63.947	Rhinopithecus_roxellana
ENSMLUG00000017590	DDX50	92	84.808	ENSSBOG00000014441	DDX50	99	86.190	Saimiri_boliviensis_boliviensis
ENSMLUG00000017590	DDX50	89	79.939	ENSSHAG00000005690	DDX50	91	80.000	Sarcophilus_harrisii
ENSMLUG00000017590	DDX50	84	64.151	ENSSHAG00000005334	-	80	66.337	Sarcophilus_harrisii
ENSMLUG00000017590	DDX50	100	78.969	ENSSARG00000013553	DDX50	88	86.667	Sorex_araneus
ENSMLUG00000017590	DDX50	100	94.437	ENSSSCG00000010246	DDX50	92	94.543	Sus_scrofa
ENSMLUG00000017590	DDX50	96	72.996	ENSTBEG00000001085	DDX50	92	72.861	Tupaia_belangeri
ENSMLUG00000017590	DDX50	92	88.643	ENSTTRG00000012408	DDX50	92	88.643	Tursiops_truncatus
ENSMLUG00000017590	DDX50	100	95.799	ENSUAMG00000010976	DDX50	100	95.799	Ursus_americanus
ENSMLUG00000017590	DDX50	100	95.799	ENSUMAG00000007726	DDX50	99	95.799	Ursus_maritimus
ENSMLUG00000017590	DDX50	92	95.133	ENSVPAG00000000626	DDX50	92	95.133	Vicugna_pacos
ENSMLUG00000017590	DDX50	82	90.879	ENSVVUG00000020366	DDX50	97	92.334	Vulpes_vulpes