EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000017604 (Gene tree)
Gene ID: 102418557
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 20885 bases
Position: chrGL429826:4503147-4524031
Accession: 102418557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000016054	KH_1	PF00013.29	2.3e-07	1	1
ENSMLUP00000016054	DEAD	PF00270.29	6.9e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000017608	-	1953	XM_006089330	ENSMLUP00000016054	651 (aa)	XP_006089392	G1PX92

Gene Model

Click here to download ENSMLUG00000017604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000017604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000017604	-	59	35.930	ENSMLUG00000003163	DDX47	81	36.412
ENSMLUG00000017604	-	68	43.973	ENSMLUG00000009496	DDX5	65	43.973
ENSMLUG00000017604	-	51	31.928	ENSMLUG00000024690	-	91	31.928
ENSMLUG00000017604	-	59	34.586	ENSMLUG00000012159	DDX49	77	35.000
ENSMLUG00000017604	-	55	33.613	ENSMLUG00000003671	DDX6	72	33.613
ENSMLUG00000017604	-	89	70.648	ENSMLUG00000022321	-	94	69.752
ENSMLUG00000017604	-	63	32.938	ENSMLUG00000007167	-	69	32.938
ENSMLUG00000017604	-	56	33.425	ENSMLUG00000016392	EIF4A2	88	33.425
ENSMLUG00000017604	-	55	32.500	ENSMLUG00000012233	-	86	32.500
ENSMLUG00000017604	-	55	30.278	ENSMLUG00000001645	DDX10	53	30.278
ENSMLUG00000017604	-	57	34.400	ENSMLUG00000003415	-	91	33.943
ENSMLUG00000017604	-	68	39.331	ENSMLUG00000003683	-	57	39.331
ENSMLUG00000017604	-	57	31.017	ENSMLUG00000005899	DDX28	75	31.017
ENSMLUG00000017604	-	91	69.849	ENSMLUG00000022233	-	98	69.717
ENSMLUG00000017604	-	66	32.420	ENSMLUG00000016730	DDX59	70	32.420
ENSMLUG00000017604	-	59	38.384	ENSMLUG00000001189	DDX4	54	38.384
ENSMLUG00000017604	-	52	34.493	ENSMLUG00000004684	-	90	34.493
ENSMLUG00000017604	-	57	41.085	ENSMLUG00000010216	DDX3X	58	40.759
ENSMLUG00000017604	-	51	32.024	ENSMLUG00000009585	-	94	32.326
ENSMLUG00000017604	-	68	43.833	ENSMLUG00000013151	DDX17	68	43.833
ENSMLUG00000017604	-	68	40.377	ENSMLUG00000011033	-	57	40.167
ENSMLUG00000017604	-	63	32.779	ENSMLUG00000024480	-	84	32.779
ENSMLUG00000017604	-	63	37.321	ENSMLUG00000006610	DDX41	65	37.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000017604	-	100	84.663	ENSAMEG00000007851	-	100	84.663	Ailuropoda_melanoleuca
ENSMLUG00000017604	-	100	77.419	ENSBTAG00000021814	-	99	77.419	Bos_taurus
ENSMLUG00000017604	-	99	77.966	ENSCAFG00020002717	-	99	77.966	Canis_lupus_dingo
ENSMLUG00000017604	-	100	83.871	ENSCAFG00020010029	-	100	83.871	Canis_lupus_dingo
ENSMLUG00000017604	-	100	78.341	ENSCHIG00000017351	-	99	78.341	Capra_hircus
ENSMLUG00000017604	-	77	78.571	ENSCAPG00000004247	-	100	78.571	Cavia_aperea
ENSMLUG00000017604	-	100	82.335	ENSCPOG00000003991	-	100	82.335	Cavia_porcellus
ENSMLUG00000017604	-	100	75.000	ENSCLAG00000010261	-	100	75.307	Chinchilla_lanigera
ENSMLUG00000017604	-	61	81.953	ENSCHOG00000003450	-	70	81.953	Choloepus_hoffmanni
ENSMLUG00000017604	-	100	83.410	ENSCGRG00001001145	Ddx43	100	82.796	Cricetulus_griseus_chok1gshd
ENSMLUG00000017604	-	87	87.788	ENSCGRG00000010217	Ddx43	100	87.788	Cricetulus_griseus_crigri
ENSMLUG00000017604	-	100	85.736	ENSDNOG00000017589	-	99	85.736	Dasypus_novemcinctus
ENSMLUG00000017604	-	100	83.564	ENSDORG00000030010	Ddx43	100	83.564	Dipodomys_ordii
ENSMLUG00000017604	-	80	90.265	ENSETEG00000001887	-	81	90.265	Echinops_telfairi
ENSMLUG00000017604	-	100	85.561	ENSEASG00005004346	-	89	85.561	Equus_asinus_asinus
ENSMLUG00000017604	-	100	85.561	ENSECAG00000017971	DDX43	98	85.561	Equus_caballus
ENSMLUG00000017604	-	100	81.413	ENSFCAG00000031631	-	99	80.799	Felis_catus
ENSMLUG00000017604	-	87	82.832	ENSHGLG00000001118	-	100	82.832	Heterocephalus_glaber_female
ENSMLUG00000017604	-	97	79.173	ENSHGLG00100011895	-	99	78.931	Heterocephalus_glaber_male
ENSMLUG00000017604	-	87	76.283	ENSSTOG00000032538	-	100	76.283	Ictidomys_tridecemlineatus
ENSMLUG00000017604	-	100	82.335	ENSJJAG00000014184	Ddx43	100	82.335	Jaculus_jaculus
ENSMLUG00000017604	-	93	85.855	ENSLAFG00000012755	-	99	85.904	Loxodonta_africana
ENSMLUG00000017604	-	100	82.488	ENSMAUG00000001441	Ddx43	100	81.874	Mesocricetus_auratus
ENSMLUG00000017604	-	100	81.930	ENSMOCG00000012956	Ddx43	100	82.083	Microtus_ochrogaster
ENSMLUG00000017604	-	100	82.642	MGP_CAROLIEiJ_G0032467	Ddx43	100	82.488	Mus_caroli
ENSMLUG00000017604	-	100	82.949	ENSMUSG00000070291	Ddx43	100	82.796	Mus_musculus
ENSMLUG00000017604	-	78	87.945	MGP_PahariEiJ_G0015333	Ddx43	86	87.945	Mus_pahari
ENSMLUG00000017604	-	100	82.949	MGP_SPRETEiJ_G0033607	Ddx43	100	82.796	Mus_spretus
ENSMLUG00000017604	-	100	84.663	ENSMPUG00000004342	-	99	84.663	Mustela_putorius_furo
ENSMLUG00000017604	-	100	82.796	ENSNGAG00000015102	Ddx43	100	82.949	Nannospalax_galili
ENSMLUG00000017604	-	75	86.607	ENSOPRG00000013523	-	86	86.607	Ochotona_princeps
ENSMLUG00000017604	-	84	82.967	ENSODEG00000016207	-	99	82.967	Octodon_degus
ENSMLUG00000017604	-	98	66.197	ENSOCUG00000025811	-	96	66.032	Oryctolagus_cuniculus
ENSMLUG00000017604	-	100	78.802	ENSOCUG00000006338	-	100	78.802	Oryctolagus_cuniculus
ENSMLUG00000017604	-	100	77.880	ENSOARG00000010873	-	99	77.880	Ovis_aries
ENSMLUG00000017604	-	100	81.874	ENSPTIG00000017842	-	99	81.260	Panthera_tigris_altaica
ENSMLUG00000017604	-	87	88.142	ENSPEMG00000023986	Ddx43	100	88.142	Peromyscus_maniculatus_bairdii
ENSMLUG00000017604	-	99	82.743	ENSPCAG00000005962	-	99	82.743	Procavia_capensis
ENSMLUG00000017604	-	87	92.212	ENSPVAG00000012718	-	99	92.212	Pteropus_vampyrus
ENSMLUG00000017604	-	100	83.257	ENSRNOG00000050868	Ddx43	100	83.103	Rattus_norvegicus
ENSMLUG00000017604	-	84	88.504	ENSSARG00000013493	-	99	88.504	Sorex_araneus
ENSMLUG00000017604	-	100	80.338	ENSSSCG00000004287	-	99	80.338	Sus_scrofa
ENSMLUG00000017604	-	87	73.982	ENSTTRG00000001488	-	99	73.982	Tursiops_truncatus
ENSMLUG00000017604	-	83	80.769	ENSUAMG00000012894	-	83	80.403	Ursus_americanus
ENSMLUG00000017604	-	100	83.896	ENSUMAG00000012291	-	99	83.896	Ursus_maritimus
ENSMLUG00000017604	-	94	74.267	ENSVPAG00000004969	-	100	74.267	Vicugna_pacos
ENSMLUG00000017604	-	100	83.410	ENSVVUG00000013908	-	100	83.410	Vulpes_vulpes