EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000017663 (Gene tree)
Gene ID: 102428237
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 76724 bases
Position: chrGL429786:3285822-3362545
Accession: 102428237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000016110	RRM_1	PF00076.22	2e-32	1	2
ENSMLUP00000016110	RRM_1	PF00076.22	2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000017667	PSPC1-201	1575	XM_006085482	ENSMLUP00000016110	524 (aa)	XP_006085544	G1PXE3

Gene Model

Click here to download ENSMLUG00000017663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000017663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000017663	PSPC1	91	58.281	ENSMLUG00000002489	NONO	69	67.671
ENSMLUG00000017663	PSPC1	89	58.403	ENSMLUG00000027090	SFPQ	81	68.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000017663	PSPC1	100	96.578	ENSG00000121390	PSPC1	100	96.578	Homo_sapiens
ENSMLUG00000017663	PSPC1	89	69.792	ENSAPOG00000015946	pspc1	79	73.441	Acanthochromis_polyacanthus
ENSMLUG00000017663	PSPC1	100	96.947	ENSAMEG00000017420	PSPC1	100	96.947	Ailuropoda_melanoleuca
ENSMLUG00000017663	PSPC1	89	61.181	ENSACIG00000018695	pspc1	87	58.650	Amphilophus_citrinellus
ENSMLUG00000017663	PSPC1	89	69.295	ENSAOCG00000005279	pspc1	88	68.201	Amphiprion_ocellaris
ENSMLUG00000017663	PSPC1	89	70.402	ENSAPEG00000015927	pspc1	79	72.979	Amphiprion_percula
ENSMLUG00000017663	PSPC1	89	58.439	ENSATEG00000004878	pspc1	76	62.440	Anabas_testudineus
ENSMLUG00000017663	PSPC1	89	60.341	ENSAPLG00000003643	SFPQ	69	68.293	Anas_platyrhynchos
ENSMLUG00000017663	PSPC1	77	92.629	ENSAPLG00000006246	PSPC1	100	92.629	Anas_platyrhynchos
ENSMLUG00000017663	PSPC1	99	84.091	ENSACAG00000002093	PSPC1	99	81.919	Anolis_carolinensis
ENSMLUG00000017663	PSPC1	89	52.521	ENSACAG00000013307	-	55	65.266	Anolis_carolinensis
ENSMLUG00000017663	PSPC1	100	96.565	ENSANAG00000000059	PSPC1	100	96.565	Aotus_nancymaae
ENSMLUG00000017663	PSPC1	99	56.960	ENSACLG00000027220	pspc1	87	58.351	Astatotilapia_calliptera
ENSMLUG00000017663	PSPC1	90	67.276	ENSAMXG00000036881	pspc1	88	68.542	Astyanax_mexicanus
ENSMLUG00000017663	PSPC1	100	95.229	ENSBTAG00000003934	PSPC1	100	95.229	Bos_taurus
ENSMLUG00000017663	PSPC1	100	96.565	ENSCJAG00000004554	PSPC1	100	96.565	Callithrix_jacchus
ENSMLUG00000017663	PSPC1	100	96.947	ENSCAFG00020002009	PSPC1	100	96.947	Canis_lupus_dingo
ENSMLUG00000017663	PSPC1	100	95.229	ENSCHIG00000016708	PSPC1	100	95.229	Capra_hircus
ENSMLUG00000017663	PSPC1	77	90.864	ENSTSYG00000032882	PSPC1	93	83.726	Carlito_syrichta
ENSMLUG00000017663	PSPC1	100	95.992	ENSCPOG00000000395	PSPC1	100	95.992	Cavia_porcellus
ENSMLUG00000017663	PSPC1	100	96.565	ENSCCAG00000033498	PSPC1	100	96.565	Cebus_capucinus
ENSMLUG00000017663	PSPC1	100	96.008	ENSCATG00000036434	PSPC1	100	96.008	Cercocebus_atys
ENSMLUG00000017663	PSPC1	89	87.124	ENSCLAG00000005241	PSPC1	99	87.124	Chinchilla_lanigera
ENSMLUG00000017663	PSPC1	100	89.544	ENSCHOG00000008913	PSPC1	100	89.163	Choloepus_hoffmanni
ENSMLUG00000017663	PSPC1	90	93.617	ENSCPBG00000020859	PSPC1	99	86.389	Chrysemys_picta_bellii
ENSMLUG00000017663	PSPC1	59	58.199	ENSCSAVG00000003533	-	53	61.131	Ciona_savignyi
ENSMLUG00000017663	PSPC1	78	84.559	ENSCANG00000018948	PSPC1	87	98.491	Colobus_angolensis_palliatus
ENSMLUG00000017663	PSPC1	100	95.817	ENSCGRG00001018368	Pspc1	100	95.817	Cricetulus_griseus_chok1gshd
ENSMLUG00000017663	PSPC1	100	95.817	ENSCGRG00000011724	Pspc1	100	95.817	Cricetulus_griseus_crigri
ENSMLUG00000017663	PSPC1	90	64.669	ENSCVAG00000007679	-	86	64.530	Cyprinodon_variegatus
ENSMLUG00000017663	PSPC1	99	66.294	ENSDARG00000006621	pspc1	100	66.667	Danio_rerio
ENSMLUG00000017663	PSPC1	100	95.247	ENSDNOG00000011078	PSPC1	100	95.057	Dasypus_novemcinctus
ENSMLUG00000017663	PSPC1	100	93.536	ENSDORG00000016050	Pspc1	100	93.536	Dipodomys_ordii
ENSMLUG00000017663	PSPC1	55	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSMLUG00000017663	PSPC1	62	46.132	ENSEBUG00000010133	pspc1	75	49.485	Eptatretus_burgeri
ENSMLUG00000017663	PSPC1	88	58.727	ENSEBUG00000003964	-	62	71.552	Eptatretus_burgeri
ENSMLUG00000017663	PSPC1	100	96.565	ENSEASG00005000119	PSPC1	100	96.565	Equus_asinus_asinus
ENSMLUG00000017663	PSPC1	100	96.565	ENSECAG00000017286	PSPC1	100	96.565	Equus_caballus
ENSMLUG00000017663	PSPC1	73	95.082	ENSEEUG00000011288	-	100	66.031	Erinaceus_europaeus
ENSMLUG00000017663	PSPC1	99	64.835	ENSELUG00000003746	pspc1	88	71.605	Esox_lucius
ENSMLUG00000017663	PSPC1	100	97.137	ENSFCAG00000027841	PSPC1	100	97.137	Felis_catus
ENSMLUG00000017663	PSPC1	90	94.043	ENSFALG00000008750	PSPC1	99	87.030	Ficedula_albicollis
ENSMLUG00000017663	PSPC1	100	93.893	ENSFDAG00000002617	PSPC1	100	93.893	Fukomys_damarensis
ENSMLUG00000017663	PSPC1	88	66.595	ENSGMOG00000015074	pspc1	86	65.880	Gadus_morhua
ENSMLUG00000017663	PSPC1	99	87.006	ENSGALG00000017142	PSPC1	99	87.006	Gallus_gallus
ENSMLUG00000017663	PSPC1	64	75.811	ENSGAFG00000006327	pspc1	67	77.134	Gambusia_affinis
ENSMLUG00000017663	PSPC1	88	65.310	ENSGACG00000014901	pspc1	92	72.424	Gasterosteus_aculeatus
ENSMLUG00000017663	PSPC1	90	93.617	ENSGAGG00000019164	PSPC1	99	86.389	Gopherus_agassizii
ENSMLUG00000017663	PSPC1	89	59.701	ENSGAGG00000017325	-	56	67.751	Gopherus_agassizii
ENSMLUG00000017663	PSPC1	100	96.388	ENSGGOG00000003414	PSPC1	100	96.388	Gorilla_gorilla
ENSMLUG00000017663	PSPC1	99	64.140	ENSHBUG00000001139	pspc1	87	69.296	Haplochromis_burtoni
ENSMLUG00000017663	PSPC1	100	95.992	ENSHGLG00000018811	PSPC1	100	95.992	Heterocephalus_glaber_female
ENSMLUG00000017663	PSPC1	67	91.453	ENSHGLG00100007962	PSPC1	100	91.453	Heterocephalus_glaber_male
ENSMLUG00000017663	PSPC1	73	68.557	ENSHCOG00000013251	pspc1	83	69.393	Hippocampus_comes
ENSMLUG00000017663	PSPC1	99	67.351	ENSIPUG00000013192	pspc1	88	73.207	Ictalurus_punctatus
ENSMLUG00000017663	PSPC1	100	96.198	ENSSTOG00000026833	PSPC1	100	96.198	Ictidomys_tridecemlineatus
ENSMLUG00000017663	PSPC1	100	95.437	ENSJJAG00000018334	Pspc1	100	95.437	Jaculus_jaculus
ENSMLUG00000017663	PSPC1	89	52.331	ENSKMAG00000013525	-	84	53.648	Kryptolebias_marmoratus
ENSMLUG00000017663	PSPC1	93	65.551	ENSLBEG00000004474	pspc1	75	71.770	Labrus_bergylta
ENSMLUG00000017663	PSPC1	99	76.306	ENSLACG00000010762	PSPC1	88	84.154	Latimeria_chalumnae
ENSMLUG00000017663	PSPC1	99	77.055	ENSLOCG00000010832	pspc1	91	83.621	Lepisosteus_oculatus
ENSMLUG00000017663	PSPC1	100	95.437	ENSLAFG00000010968	PSPC1	100	95.437	Loxodonta_africana
ENSMLUG00000017663	PSPC1	100	96.198	ENSMFAG00000032728	PSPC1	100	96.198	Macaca_fascicularis
ENSMLUG00000017663	PSPC1	100	96.198	ENSMMUG00000020262	PSPC1	100	96.198	Macaca_mulatta
ENSMLUG00000017663	PSPC1	100	96.198	ENSMNEG00000027401	PSPC1	100	96.198	Macaca_nemestrina
ENSMLUG00000017663	PSPC1	100	98.010	ENSMLEG00000039043	PSPC1	100	98.010	Mandrillus_leucophaeus
ENSMLUG00000017663	PSPC1	90	66.531	ENSMAMG00000004333	pspc1	88	61.845	Mastacembelus_armatus
ENSMLUG00000017663	PSPC1	99	56.960	ENSMZEG00005005726	pspc1	87	58.351	Maylandia_zebra
ENSMLUG00000017663	PSPC1	78	92.421	ENSMGAG00000015134	PSPC1	100	92.421	Meleagris_gallopavo
ENSMLUG00000017663	PSPC1	88	90.323	ENSMAUG00000021067	Pspc1	99	89.677	Mesocricetus_auratus
ENSMLUG00000017663	PSPC1	100	96.008	ENSMICG00000013970	PSPC1	100	96.008	Microcebus_murinus
ENSMLUG00000017663	PSPC1	100	94.867	ENSMOCG00000006060	Pspc1	100	95.057	Microtus_ochrogaster
ENSMLUG00000017663	PSPC1	88	43.611	ENSMMOG00000004352	pspc1	58	52.439	Mola_mola
ENSMLUG00000017663	PSPC1	93	93.443	ENSMODG00000008029	PSPC1	78	94.262	Monodelphis_domestica
ENSMLUG00000017663	PSPC1	89	69.083	ENSMALG00000008914	pspc1	88	68.565	Monopterus_albus
ENSMLUG00000017663	PSPC1	100	95.636	MGP_CAROLIEiJ_G0019341	Pspc1	100	95.636	Mus_caroli
ENSMLUG00000017663	PSPC1	100	95.825	ENSMUSG00000021938	Pspc1	100	95.825	Mus_musculus
ENSMLUG00000017663	PSPC1	100	95.636	MGP_PahariEiJ_G0030359	Pspc1	100	95.636	Mus_pahari
ENSMLUG00000017663	PSPC1	100	95.825	MGP_SPRETEiJ_G0020232	Pspc1	100	95.825	Mus_spretus
ENSMLUG00000017663	PSPC1	100	96.756	ENSMPUG00000013347	PSPC1	100	96.756	Mustela_putorius_furo
ENSMLUG00000017663	PSPC1	100	95.627	ENSNGAG00000011271	Pspc1	100	95.627	Nannospalax_galili
ENSMLUG00000017663	PSPC1	74	64.160	ENSNBRG00000014059	pspc1	76	68.278	Neolamprologus_brichardi
ENSMLUG00000017663	PSPC1	100	96.198	ENSNLEG00000001294	PSPC1	100	96.198	Nomascus_leucogenys
ENSMLUG00000017663	PSPC1	84	92.188	ENSMEUG00000000476	PSPC1	84	93.359	Notamacropus_eugenii
ENSMLUG00000017663	PSPC1	100	84.733	ENSODEG00000007817	-	100	80.943	Octodon_degus
ENSMLUG00000017663	PSPC1	100	83.810	ENSODEG00000019012	-	100	85.283	Octodon_degus
ENSMLUG00000017663	PSPC1	99	64.140	ENSONIG00000012010	pspc1	87	68.421	Oreochromis_niloticus
ENSMLUG00000017663	PSPC1	99	65.905	ENSOANG00000011381	-	99	65.524	Ornithorhynchus_anatinus
ENSMLUG00000017663	PSPC1	77	96.517	ENSOANG00000009017	-	100	96.517	Ornithorhynchus_anatinus
ENSMLUG00000017663	PSPC1	100	96.578	ENSOCUG00000006153	PSPC1	100	96.578	Oryctolagus_cuniculus
ENSMLUG00000017663	PSPC1	89	69.979	ENSORLG00000004232	-	87	65.417	Oryzias_latipes
ENSMLUG00000017663	PSPC1	89	68.710	ENSORLG00020000578	PSPC1	87	65.625	Oryzias_latipes_hni
ENSMLUG00000017663	PSPC1	89	70.402	ENSORLG00015017480	pspc1	87	65.625	Oryzias_latipes_hsok
ENSMLUG00000017663	PSPC1	100	96.578	ENSOGAG00000012643	PSPC1	100	96.578	Otolemur_garnettii
ENSMLUG00000017663	PSPC1	100	90.494	ENSOARG00000014163	PSPC1	100	90.494	Ovis_aries
ENSMLUG00000017663	PSPC1	90	91.258	ENSPPAG00000009836	PSPC1	98	93.484	Pan_paniscus
ENSMLUG00000017663	PSPC1	100	97.137	ENSPPRG00000008833	PSPC1	100	97.137	Panthera_pardus
ENSMLUG00000017663	PSPC1	100	82.824	ENSPTIG00000016917	PSPC1	100	82.824	Panthera_tigris_altaica
ENSMLUG00000017663	PSPC1	98	94.971	ENSPTRG00000005677	PSPC1	99	96.524	Pan_troglodytes
ENSMLUG00000017663	PSPC1	100	96.198	ENSPANG00000001992	PSPC1	100	96.198	Papio_anubis
ENSMLUG00000017663	PSPC1	89	74.034	ENSPKIG00000003578	pspc1	89	72.557	Paramormyrops_kingsleyae
ENSMLUG00000017663	PSPC1	99	86.330	ENSPSIG00000005168	PSPC1	99	86.116	Pelodiscus_sinensis
ENSMLUG00000017663	PSPC1	61	67.988	ENSPMGG00000015135	pspc1	80	72.509	Periophthalmus_magnuspinnatus
ENSMLUG00000017663	PSPC1	100	96.198	ENSPEMG00000015214	Pspc1	100	96.198	Peromyscus_maniculatus_bairdii
ENSMLUG00000017663	PSPC1	54	45.172	ENSPMAG00000004618	pspc1	79	46.768	Petromyzon_marinus
ENSMLUG00000017663	PSPC1	99	93.905	ENSPCIG00000017680	PSPC1	100	94.667	Phascolarctos_cinereus
ENSMLUG00000017663	PSPC1	92	67.197	ENSPFOG00000003362	pspc1	88	68.987	Poecilia_formosa
ENSMLUG00000017663	PSPC1	92	67.197	ENSPLAG00000011540	pspc1	87	68.987	Poecilia_latipinna
ENSMLUG00000017663	PSPC1	69	63.736	ENSPLAG00000004407	-	51	60.054	Poecilia_latipinna
ENSMLUG00000017663	PSPC1	68	64.607	ENSPMEG00000001025	-	50	60.054	Poecilia_mexicana
ENSMLUG00000017663	PSPC1	92	66.799	ENSPMEG00000008322	pspc1	87	68.565	Poecilia_mexicana
ENSMLUG00000017663	PSPC1	92	67.197	ENSPREG00000007786	pspc1	87	68.565	Poecilia_reticulata
ENSMLUG00000017663	PSPC1	100	96.008	ENSPPYG00000005186	PSPC1	100	96.008	Pongo_abelii
ENSMLUG00000017663	PSPC1	67	97.590	ENSPCAG00000008314	-	66	97.590	Procavia_capensis
ENSMLUG00000017663	PSPC1	100	91.635	ENSPCOG00000014364	PSPC1	100	91.635	Propithecus_coquereli
ENSMLUG00000017663	PSPC1	100	94.084	ENSPVAG00000005036	PSPC1	100	93.893	Pteropus_vampyrus
ENSMLUG00000017663	PSPC1	99	56.960	ENSPNYG00000008893	pspc1	87	58.351	Pundamilia_nyererei
ENSMLUG00000017663	PSPC1	99	67.844	ENSPNAG00000016511	pspc1	100	67.035	Pygocentrus_nattereri
ENSMLUG00000017663	PSPC1	100	95.627	ENSRNOG00000020782	Pspc1	100	95.627	Rattus_norvegicus
ENSMLUG00000017663	PSPC1	94	96.735	ENSRBIG00000036057	PSPC1	100	96.735	Rhinopithecus_bieti
ENSMLUG00000017663	PSPC1	100	96.198	ENSRROG00000036334	PSPC1	100	96.198	Rhinopithecus_roxellana
ENSMLUG00000017663	PSPC1	79	87.500	ENSSBOG00000028172	PSPC1	90	93.907	Saimiri_boliviensis_boliviensis
ENSMLUG00000017663	PSPC1	100	88.636	ENSSHAG00000004696	PSPC1	100	89.394	Sarcophilus_harrisii
ENSMLUG00000017663	PSPC1	81	78.505	ENSSFOG00015001395	pspc1	89	77.726	Scleropages_formosus
ENSMLUG00000017663	PSPC1	95	62.900	ENSSMAG00000001761	pspc1	82	75.976	Scophthalmus_maximus
ENSMLUG00000017663	PSPC1	89	68.548	ENSSDUG00000010651	pspc1	76	73.903	Seriola_dumerili
ENSMLUG00000017663	PSPC1	88	63.871	ENSSLDG00000004284	pspc1	86	59.158	Seriola_lalandi_dorsalis
ENSMLUG00000017663	PSPC1	100	89.504	ENSSARG00000000888	PSPC1	100	89.504	Sorex_araneus
ENSMLUG00000017663	PSPC1	99	74.388	ENSSPUG00000008550	PSPC1	99	75.188	Sphenodon_punctatus
ENSMLUG00000017663	PSPC1	90	53.209	ENSSPUG00000001136	-	53	61.111	Sphenodon_punctatus
ENSMLUG00000017663	PSPC1	89	68.443	ENSSPAG00000001921	pspc1	88	66.598	Stegastes_partitus
ENSMLUG00000017663	PSPC1	100	96.381	ENSSSCG00000009569	PSPC1	100	96.381	Sus_scrofa
ENSMLUG00000017663	PSPC1	90	94.043	ENSTGUG00000011295	PSPC1	100	94.043	Taeniopygia_guttata
ENSMLUG00000017663	PSPC1	90	62.268	ENSTRUG00000011335	pspc1	88	61.783	Takifugu_rubripes
ENSMLUG00000017663	PSPC1	89	64.606	ENSTNIG00000010358	pspc1	88	62.393	Tetraodon_nigroviridis
ENSMLUG00000017663	PSPC1	100	75.954	ENSTBEG00000002361	PSPC1	100	73.664	Tupaia_belangeri
ENSMLUG00000017663	PSPC1	100	96.565	ENSTTRG00000003343	PSPC1	100	96.565	Tursiops_truncatus
ENSMLUG00000017663	PSPC1	67	96.307	ENSUAMG00000012309	PSPC1	100	96.307	Ursus_americanus
ENSMLUG00000017663	PSPC1	94	96.939	ENSUMAG00000013993	PSPC1	100	96.939	Ursus_maritimus
ENSMLUG00000017663	PSPC1	77	97.761	ENSVPAG00000010029	PSPC1	100	97.761	Vicugna_pacos
ENSMLUG00000017663	PSPC1	100	96.947	ENSVVUG00000006414	PSPC1	100	96.947	Vulpes_vulpes
ENSMLUG00000017663	PSPC1	66	72.905	ENSXCOG00000017438	pspc1	77	75.988	Xiphophorus_couchianus
ENSMLUG00000017663	PSPC1	66	73.184	ENSXMAG00000007929	pspc1	77	76.292	Xiphophorus_maculatus