EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000017686 (Gene tree)
Gene ID: 102432712
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 21638 bases
Position: chrGL429811:6038152-6059789
Accession: 102432712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000016130	TruB_N	PF01509.18	2.8e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000017690	TRUB1-201	1023	XM_006088152	ENSMLUP00000016130	340 (aa)	XP_006088214	G1PXG1

Gene Model

Click here to download ENSMLUG00000017686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000017686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000017686	TRUB1	60	33.493	ENSMLUG00000005256	TRUB2	62	33.493

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000017686	TRUB1	100	86.610	ENSG00000165832	TRUB1	96	87.761	Homo_sapiens
ENSMLUG00000017686	TRUB1	72	67.755	ENSAPOG00000020565	trub1	89	67.480	Acanthochromis_polyacanthus
ENSMLUG00000017686	TRUB1	96	87.278	ENSAMEG00000014931	TRUB1	95	88.095	Ailuropoda_melanoleuca
ENSMLUG00000017686	TRUB1	78	60.526	ENSACIG00000003060	trub1	88	60.526	Amphilophus_citrinellus
ENSMLUG00000017686	TRUB1	72	67.755	ENSAOCG00000017188	trub1	89	67.480	Amphiprion_ocellaris
ENSMLUG00000017686	TRUB1	72	67.073	ENSAPEG00000015209	trub1	89	67.073	Amphiprion_percula
ENSMLUG00000017686	TRUB1	71	68.465	ENSATEG00000023291	trub1	86	68.465	Anabas_testudineus
ENSMLUG00000017686	TRUB1	81	76.000	ENSAPLG00000006808	TRUB1	99	76.000	Anas_platyrhynchos
ENSMLUG00000017686	TRUB1	79	71.481	ENSACAG00000009282	TRUB1	98	70.956	Anolis_carolinensis
ENSMLUG00000017686	TRUB1	100	86.040	ENSANAG00000022870	TRUB1	95	89.254	Aotus_nancymaae
ENSMLUG00000017686	TRUB1	77	65.134	ENSACLG00000000823	trub1	93	65.134	Astatotilapia_calliptera
ENSMLUG00000017686	TRUB1	79	64.444	ENSAMXG00000015845	trub1	90	64.444	Astyanax_mexicanus
ENSMLUG00000017686	TRUB1	96	86.726	ENSBTAG00000012955	TRUB1	95	88.288	Bos_taurus
ENSMLUG00000017686	TRUB1	100	88.034	ENSCJAG00000047815	TRUB1	95	89.552	Callithrix_jacchus
ENSMLUG00000017686	TRUB1	99	87.429	ENSCAFG00000011688	TRUB1	95	90.419	Canis_familiaris
ENSMLUG00000017686	TRUB1	99	87.714	ENSCAFG00020013237	TRUB1	95	90.719	Canis_lupus_dingo
ENSMLUG00000017686	TRUB1	96	86.431	ENSCHIG00000020884	TRUB1	94	88.822	Capra_hircus
ENSMLUG00000017686	TRUB1	100	84.375	ENSTSYG00000000446	TRUB1	96	86.607	Carlito_syrichta
ENSMLUG00000017686	TRUB1	75	82.283	ENSCAPG00000017088	TRUB1	100	82.283	Cavia_aperea
ENSMLUG00000017686	TRUB1	69	81.707	ENSCPOG00000040236	-	90	87.671	Cavia_porcellus
ENSMLUG00000017686	TRUB1	70	83.193	ENSCPOG00000030129	-	76	92.821	Cavia_porcellus
ENSMLUG00000017686	TRUB1	100	85.185	ENSCCAG00000028842	TRUB1	95	88.955	Cebus_capucinus
ENSMLUG00000017686	TRUB1	100	86.325	ENSCATG00000033431	TRUB1	96	88.358	Cercocebus_atys
ENSMLUG00000017686	TRUB1	69	84.146	ENSCLAG00000008664	TRUB1	90	89.954	Chinchilla_lanigera
ENSMLUG00000017686	TRUB1	100	86.610	ENSCSAG00000004891	TRUB1	96	88.657	Chlorocebus_sabaeus
ENSMLUG00000017686	TRUB1	99	74.286	ENSCHOG00000011931	TRUB1	95	75.150	Choloepus_hoffmanni
ENSMLUG00000017686	TRUB1	80	79.412	ENSCPBG00000003051	TRUB1	94	79.412	Chrysemys_picta_bellii
ENSMLUG00000017686	TRUB1	100	86.610	ENSCANG00000029445	TRUB1	96	88.657	Colobus_angolensis_palliatus
ENSMLUG00000017686	TRUB1	75	86.614	ENSCGRG00001016772	-	91	78.261	Cricetulus_griseus_chok1gshd
ENSMLUG00000017686	TRUB1	82	78.929	ENSCGRG00001010322	-	80	78.451	Cricetulus_griseus_chok1gshd
ENSMLUG00000017686	TRUB1	82	87.857	ENSCGRG00000010806	Trub1	91	86.957	Cricetulus_griseus_crigri
ENSMLUG00000017686	TRUB1	72	63.673	ENSCSEG00000011261	trub1	79	63.673	Cynoglossus_semilaevis
ENSMLUG00000017686	TRUB1	72	67.347	ENSCVAG00000008791	trub1	75	67.347	Cyprinodon_variegatus
ENSMLUG00000017686	TRUB1	86	60.943	ENSDARG00000053805	trub1	98	60.943	Danio_rerio
ENSMLUG00000017686	TRUB1	98	82.609	ENSDNOG00000001069	TRUB1	94	84.498	Dasypus_novemcinctus
ENSMLUG00000017686	TRUB1	99	84.971	ENSDORG00000010431	Trub1	87	91.694	Dipodomys_ordii
ENSMLUG00000017686	TRUB1	80	72.289	ENSETEG00000009183	TRUB1	65	83.893	Echinops_telfairi
ENSMLUG00000017686	TRUB1	96	87.798	ENSEASG00005014739	TRUB1	95	89.222	Equus_asinus_asinus
ENSMLUG00000017686	TRUB1	96	87.798	ENSECAG00000007177	TRUB1	95	89.222	Equus_caballus
ENSMLUG00000017686	TRUB1	99	72.626	ENSEEUG00000013993	TRUB1	82	81.229	Erinaceus_europaeus
ENSMLUG00000017686	TRUB1	72	69.388	ENSELUG00000000502	trub1	86	69.388	Esox_lucius
ENSMLUG00000017686	TRUB1	95	87.463	ENSFCAG00000031927	TRUB1	95	88.288	Felis_catus
ENSMLUG00000017686	TRUB1	71	76.667	ENSFALG00000002232	TRUB1	92	76.667	Ficedula_albicollis
ENSMLUG00000017686	TRUB1	69	84.146	ENSFDAG00000008140	TRUB1	94	87.391	Fukomys_damarensis
ENSMLUG00000017686	TRUB1	72	66.122	ENSFHEG00000004016	trub1	84	66.122	Fundulus_heteroclitus
ENSMLUG00000017686	TRUB1	80	75.000	ENSGALG00000009091	TRUB1	96	75.000	Gallus_gallus
ENSMLUG00000017686	TRUB1	70	64.583	ENSGAFG00000009193	trub1	86	63.934	Gambusia_affinis
ENSMLUG00000017686	TRUB1	57	67.692	ENSGACG00000015387	trub1	96	67.692	Gasterosteus_aculeatus
ENSMLUG00000017686	TRUB1	89	74.503	ENSGAGG00000009758	TRUB1	81	77.739	Gopherus_agassizii
ENSMLUG00000017686	TRUB1	100	87.464	ENSGGOG00000004583	TRUB1	96	88.358	Gorilla_gorilla
ENSMLUG00000017686	TRUB1	77	65.134	ENSHBUG00000016787	trub1	93	65.134	Haplochromis_burtoni
ENSMLUG00000017686	TRUB1	99	81.429	ENSHGLG00000015314	TRUB1	96	84.431	Heterocephalus_glaber_female
ENSMLUG00000017686	TRUB1	69	84.519	ENSHGLG00100009183	TRUB1	94	88.789	Heterocephalus_glaber_male
ENSMLUG00000017686	TRUB1	72	66.939	ENSHCOG00000017877	trub1	89	66.939	Hippocampus_comes
ENSMLUG00000017686	TRUB1	80	65.441	ENSIPUG00000017559	trub1	95	65.441	Ictalurus_punctatus
ENSMLUG00000017686	TRUB1	96	88.923	ENSSTOG00000003641	TRUB1	95	88.199	Ictidomys_tridecemlineatus
ENSMLUG00000017686	TRUB1	88	90.000	ENSJJAG00000011800	Trub1	88	90.000	Jaculus_jaculus
ENSMLUG00000017686	TRUB1	74	65.759	ENSKMAG00000006232	trub1	92	65.759	Kryptolebias_marmoratus
ENSMLUG00000017686	TRUB1	76	64.151	ENSLBEG00000026722	trub1	94	62.963	Labrus_bergylta
ENSMLUG00000017686	TRUB1	81	74.088	ENSLACG00000014885	TRUB1	92	74.088	Latimeria_chalumnae
ENSMLUG00000017686	TRUB1	81	69.565	ENSLOCG00000012979	trub1	94	69.565	Lepisosteus_oculatus
ENSMLUG00000017686	TRUB1	100	78.348	ENSLAFG00000015452	TRUB1	95	80.000	Loxodonta_africana
ENSMLUG00000017686	TRUB1	100	86.325	ENSMFAG00000031767	TRUB1	96	88.358	Macaca_fascicularis
ENSMLUG00000017686	TRUB1	100	86.610	ENSMMUG00000001902	TRUB1	96	88.657	Macaca_mulatta
ENSMLUG00000017686	TRUB1	100	82.621	ENSMNEG00000044646	TRUB1	96	84.478	Macaca_nemestrina
ENSMLUG00000017686	TRUB1	100	86.610	ENSMLEG00000042655	TRUB1	96	88.657	Mandrillus_leucophaeus
ENSMLUG00000017686	TRUB1	77	65.134	ENSMZEG00005024095	trub1	93	65.134	Maylandia_zebra
ENSMLUG00000017686	TRUB1	80	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSMLUG00000017686	TRUB1	82	84.286	ENSMAUG00000011101	Trub1	88	83.946	Mesocricetus_auratus
ENSMLUG00000017686	TRUB1	99	87.143	ENSMICG00000016324	TRUB1	96	89.222	Microcebus_murinus
ENSMLUG00000017686	TRUB1	99	78.761	ENSMOCG00000017759	Trub1	97	81.308	Microtus_ochrogaster
ENSMLUG00000017686	TRUB1	84	83.217	ENSMODG00000009676	TRUB1	87	77.882	Monodelphis_domestica
ENSMLUG00000017686	TRUB1	99	79.240	MGP_CAROLIEiJ_G0023100	Trub1	95	82.188	Mus_caroli
ENSMLUG00000017686	TRUB1	99	78.070	ENSMUSG00000025086	Trub1	95	80.938	Mus_musculus
ENSMLUG00000017686	TRUB1	99	79.532	MGP_PahariEiJ_G0014588	Trub1	95	82.812	Mus_pahari
ENSMLUG00000017686	TRUB1	99	78.363	MGP_SPRETEiJ_G0024021	Trub1	95	81.250	Mus_spretus
ENSMLUG00000017686	TRUB1	96	89.286	ENSMPUG00000003556	TRUB1	95	91.018	Mustela_putorius_furo
ENSMLUG00000017686	TRUB1	99	82.000	ENSNGAG00000018682	Trub1	96	84.685	Nannospalax_galili
ENSMLUG00000017686	TRUB1	72	67.480	ENSNBRG00000023393	trub1	88	67.480	Neolamprologus_brichardi
ENSMLUG00000017686	TRUB1	96	86.944	ENSNLEG00000016345	TRUB1	96	88.060	Nomascus_leucogenys
ENSMLUG00000017686	TRUB1	59	91.045	ENSMEUG00000006603	TRUB1	91	79.675	Notamacropus_eugenii
ENSMLUG00000017686	TRUB1	89	84.053	ENSOPRG00000009371	TRUB1	88	84.053	Ochotona_princeps
ENSMLUG00000017686	TRUB1	99	81.143	ENSODEG00000010854	TRUB1	86	87.708	Octodon_degus
ENSMLUG00000017686	TRUB1	72	67.073	ENSONIG00000007249	trub1	89	67.073	Oreochromis_niloticus
ENSMLUG00000017686	TRUB1	81	81.387	ENSOANG00000001556	TRUB1	93	79.859	Ornithorhynchus_anatinus
ENSMLUG00000017686	TRUB1	89	86.711	ENSOCUG00000009456	TRUB1	96	83.183	Oryctolagus_cuniculus
ENSMLUG00000017686	TRUB1	71	68.465	ENSORLG00000029719	trub1	86	68.465	Oryzias_latipes
ENSMLUG00000017686	TRUB1	71	68.050	ENSORLG00020016767	trub1	85	68.050	Oryzias_latipes_hni
ENSMLUG00000017686	TRUB1	77	64.368	ENSORLG00015014728	trub1	92	64.122	Oryzias_latipes_hsok
ENSMLUG00000017686	TRUB1	77	64.751	ENSOMEG00000014556	trub1	91	64.751	Oryzias_melastigma
ENSMLUG00000017686	TRUB1	99	86.286	ENSOGAG00000015895	TRUB1	95	90.390	Otolemur_garnettii
ENSMLUG00000017686	TRUB1	96	85.588	ENSOARG00000015591	TRUB1	95	86.269	Ovis_aries
ENSMLUG00000017686	TRUB1	100	87.179	ENSPPAG00000043645	TRUB1	96	88.358	Pan_paniscus
ENSMLUG00000017686	TRUB1	95	87.164	ENSPPRG00000007096	TRUB1	95	87.688	Panthera_pardus
ENSMLUG00000017686	TRUB1	95	87.463	ENSPTIG00000006378	TRUB1	95	87.988	Panthera_tigris_altaica
ENSMLUG00000017686	TRUB1	100	87.179	ENSPTRG00000002964	TRUB1	96	88.358	Pan_troglodytes
ENSMLUG00000017686	TRUB1	100	86.325	ENSPANG00000020712	TRUB1	96	88.358	Papio_anubis
ENSMLUG00000017686	TRUB1	80	76.838	ENSPSIG00000012877	TRUB1	93	76.838	Pelodiscus_sinensis
ENSMLUG00000017686	TRUB1	72	65.306	ENSPMGG00000000075	trub1	96	61.194	Periophthalmus_magnuspinnatus
ENSMLUG00000017686	TRUB1	87	84.459	ENSPEMG00000011156	Trub1	87	84.459	Peromyscus_maniculatus_bairdii
ENSMLUG00000017686	TRUB1	84	82.517	ENSPCIG00000009729	TRUB1	81	80.808	Phascolarctos_cinereus
ENSMLUG00000017686	TRUB1	72	65.306	ENSPFOG00000009950	trub1	90	65.306	Poecilia_formosa
ENSMLUG00000017686	TRUB1	79	62.222	ENSPLAG00000013855	trub1	86	65.306	Poecilia_latipinna
ENSMLUG00000017686	TRUB1	72	65.306	ENSPMEG00000009064	trub1	88	65.306	Poecilia_mexicana
ENSMLUG00000017686	TRUB1	72	66.122	ENSPREG00000003343	trub1	88	66.122	Poecilia_reticulata
ENSMLUG00000017686	TRUB1	96	87.834	ENSPPYG00000002676	TRUB1	96	87.761	Pongo_abelii
ENSMLUG00000017686	TRUB1	100	71.388	ENSPCAG00000008427	TRUB1	95	72.107	Procavia_capensis
ENSMLUG00000017686	TRUB1	99	82.000	ENSPCOG00000024360	TRUB1	95	83.832	Propithecus_coquereli
ENSMLUG00000017686	TRUB1	75	86.038	ENSPVAG00000007575	TRUB1	95	88.755	Pteropus_vampyrus
ENSMLUG00000017686	TRUB1	77	65.134	ENSPNYG00000018614	trub1	93	65.134	Pundamilia_nyererei
ENSMLUG00000017686	TRUB1	76	58.846	ENSPNAG00000006881	trub1	84	58.846	Pygocentrus_nattereri
ENSMLUG00000017686	TRUB1	99	78.551	ENSRNOG00000017321	Trub1	95	82.353	Rattus_norvegicus
ENSMLUG00000017686	TRUB1	100	76.638	ENSRBIG00000033423	TRUB1	95	78.507	Rhinopithecus_bieti
ENSMLUG00000017686	TRUB1	100	86.325	ENSRROG00000033902	TRUB1	96	88.657	Rhinopithecus_roxellana
ENSMLUG00000017686	TRUB1	100	87.179	ENSSBOG00000024237	TRUB1	95	89.254	Saimiri_boliviensis_boliviensis
ENSMLUG00000017686	TRUB1	75	81.250	ENSSHAG00000009346	TRUB1	86	81.250	Sarcophilus_harrisii
ENSMLUG00000017686	TRUB1	71	69.136	ENSSFOG00015022124	trub1	83	69.136	Scleropages_formosus
ENSMLUG00000017686	TRUB1	72	67.480	ENSSMAG00000001020	trub1	88	67.480	Scophthalmus_maximus
ENSMLUG00000017686	TRUB1	71	67.917	ENSSDUG00000016414	trub1	88	67.886	Seriola_dumerili
ENSMLUG00000017686	TRUB1	71	68.333	ENSSLDG00000015486	trub1	88	68.293	Seriola_lalandi_dorsalis
ENSMLUG00000017686	TRUB1	82	77.061	ENSSPUG00000001642	TRUB1	96	77.061	Sphenodon_punctatus
ENSMLUG00000017686	TRUB1	78	65.530	ENSSPAG00000001217	trub1	94	65.530	Stegastes_partitus
ENSMLUG00000017686	TRUB1	99	81.429	ENSSSCG00000010653	TRUB1	95	82.635	Sus_scrofa
ENSMLUG00000017686	TRUB1	79	76.296	ENSTGUG00000010971	TRUB1	99	74.733	Taeniopygia_guttata
ENSMLUG00000017686	TRUB1	74	74.704	ENSTBEG00000002880	TRUB1	99	74.704	Tupaia_belangeri
ENSMLUG00000017686	TRUB1	71	86.747	ENSTTRG00000005767	TRUB1	94	88.211	Tursiops_truncatus
ENSMLUG00000017686	TRUB1	96	89.286	ENSUAMG00000024876	TRUB1	95	90.120	Ursus_americanus
ENSMLUG00000017686	TRUB1	96	91.385	ENSUMAG00000002411	TRUB1	95	91.331	Ursus_maritimus
ENSMLUG00000017686	TRUB1	98	86.377	ENSVPAG00000005507	TRUB1	94	87.538	Vicugna_pacos
ENSMLUG00000017686	TRUB1	99	87.896	ENSVVUG00000010085	TRUB1	80	90.937	Vulpes_vulpes
ENSMLUG00000017686	TRUB1	78	67.424	ENSXETG00000023828	trub1	95	67.424	Xenopus_tropicalis
ENSMLUG00000017686	TRUB1	78	61.509	ENSXCOG00000017847	trub1	86	64.198	Xiphophorus_couchianus
ENSMLUG00000017686	TRUB1	72	64.490	ENSXMAG00000014701	trub1	88	64.490	Xiphophorus_maculatus