EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000022233 (Gene tree)
Gene ID: 102431020
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 1830 bases
Position: chrGL429787:1634372-1636201
Accession: 102431020
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000016573	KH_1	PF00013.29	1.1e-12	1	1
ENSMLUP00000016573	DEAD	PF00270.29	3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000024493	-	1830	XM_006085669	ENSMLUP00000016573	609 (aa)	XP_006085731	G1PYP1

Gene Model

Click here to download ENSMLUG00000022233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000022233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000022233	-	56	34.375	ENSMLUG00000012159	DDX49	72	34.375
ENSMLUG00000022233	-	60	30.295	ENSMLUG00000026217	-	85	30.295
ENSMLUG00000022233	-	63	37.531	ENSMLUG00000001189	DDX4	54	37.531
ENSMLUG00000022233	-	63	37.349	ENSMLUG00000003683	-	50	37.260
ENSMLUG00000022233	-	67	31.019	ENSMLUG00000007167	-	76	30.490
ENSMLUG00000022233	-	63	34.097	ENSMLUG00000016730	DDX59	64	33.924
ENSMLUG00000022233	-	61	37.789	ENSMLUG00000010216	DDX3X	60	37.037
ENSMLUG00000022233	-	73	42.762	ENSMLUG00000013151	DDX17	68	42.762
ENSMLUG00000022233	-	55	32.164	ENSMLUG00000004684	-	90	32.164
ENSMLUG00000022233	-	98	95.966	ENSMLUG00000022321	-	93	95.966
ENSMLUG00000022233	-	59	31.148	ENSMLUG00000003415	-	88	31.148
ENSMLUG00000022233	-	67	31.090	ENSMLUG00000024480	-	92	30.556
ENSMLUG00000022233	-	53	34.259	ENSMLUG00000009585	-	92	34.259
ENSMLUG00000022233	-	60	30.563	ENSMLUG00000028448	-	85	30.563
ENSMLUG00000022233	-	72	35.957	ENSMLUG00000011033	-	55	35.881
ENSMLUG00000022233	-	58	31.180	ENSMLUG00000003671	DDX6	72	31.180
ENSMLUG00000022233	-	60	30.563	ENSMLUG00000000939	-	85	30.563
ENSMLUG00000022233	-	70	33.562	ENSMLUG00000006610	DDX41	68	33.562
ENSMLUG00000022233	-	56	33.237	ENSMLUG00000012233	-	82	33.237
ENSMLUG00000022233	-	64	30.127	ENSMLUG00000029622	-	90	30.127
ENSMLUG00000022233	-	56	32.370	ENSMLUG00000016392	EIF4A2	83	32.370
ENSMLUG00000022233	-	98	69.717	ENSMLUG00000017604	-	91	69.849
ENSMLUG00000022233	-	58	33.244	ENSMLUG00000017607	DDX18	54	33.244
ENSMLUG00000022233	-	72	42.889	ENSMLUG00000009496	DDX5	67	42.232
ENSMLUG00000022233	-	54	31.722	ENSMLUG00000024690	-	91	31.722
ENSMLUG00000022233	-	56	35.942	ENSMLUG00000003163	DDX47	74	35.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000022233	-	98	69.833	ENSAMEG00000019953	-	97	70.252	Ailuropoda_melanoleuca
ENSMLUG00000022233	-	99	68.954	ENSBTAG00000046635	-	96	69.580	Bos_taurus
ENSMLUG00000022233	-	63	74.607	ENSCAFG00020005312	-	82	74.607	Canis_lupus_dingo
ENSMLUG00000022233	-	98	69.732	ENSCHIG00000020582	-	93	71.652	Capra_hircus
ENSMLUG00000022233	-	98	67.273	ENSCPOG00000013960	-	90	67.388	Cavia_porcellus
ENSMLUG00000022233	-	98	67.210	ENSCLAG00000017424	-	90	67.213	Chinchilla_lanigera
ENSMLUG00000022233	-	98	71.429	ENSEASG00005001728	-	92	71.429	Equus_asinus_asinus
ENSMLUG00000022233	-	98	70.588	ENSECAG00000035665	-	95	70.588	Equus_caballus
ENSMLUG00000022233	-	98	70.756	ENSECAG00000037015	DDX53	95	70.756	Equus_caballus
ENSMLUG00000022233	-	52	87.879	ENSEEUG00000008838	-	69	87.879	Erinaceus_europaeus
ENSMLUG00000022233	-	82	69.940	ENSFDAG00000020660	-	97	69.940	Fukomys_damarensis
ENSMLUG00000022233	-	68	65.311	ENSFDAG00000018215	-	86	66.584	Fukomys_damarensis
ENSMLUG00000022233	-	99	69.967	ENSSTOG00000027719	-	79	70.588	Ictidomys_tridecemlineatus
ENSMLUG00000022233	-	99	70.888	ENSLAFG00000011531	-	94	71.886	Loxodonta_africana
ENSMLUG00000022233	-	98	72.408	ENSMPUG00000019441	-	97	72.651	Mustela_putorius_furo
ENSMLUG00000022233	-	99	67.720	ENSOCUG00000004437	-	92	68.475	Oryctolagus_cuniculus
ENSMLUG00000022233	-	97	68.571	ENSOGAG00000026282	-	93	68.750	Otolemur_garnettii
ENSMLUG00000022233	-	94	71.826	ENSOARG00000016525	-	93	72.281	Ovis_aries
ENSMLUG00000022233	-	96	73.595	ENSPPRG00000011327	-	90	73.595	Panthera_pardus
ENSMLUG00000022233	-	96	73.424	ENSPTIG00000001243	-	90	73.424	Panthera_tigris_altaica
ENSMLUG00000022233	-	98	74.707	ENSPVAG00000001484	-	94	74.790	Pteropus_vampyrus
ENSMLUG00000022233	-	98	72.621	ENSSSCG00000012169	-	94	72.605	Sus_scrofa
ENSMLUG00000022233	-	98	67.279	ENSTBEG00000014650	-	93	67.736	Tupaia_belangeri
ENSMLUG00000022233	-	58	47.458	ENSTBEG00000001513	-	87	48.083	Tupaia_belangeri
ENSMLUG00000022233	-	100	65.139	ENSTTRG00000016514	-	94	65.159	Tursiops_truncatus
ENSMLUG00000022233	-	98	72.833	ENSUAMG00000000177	-	93	73.154	Ursus_americanus
ENSMLUG00000022233	-	61	79.357	ENSUMAG00000011448	-	84	79.357	Ursus_maritimus
ENSMLUG00000022233	-	100	70.936	ENSVPAG00000007860	-	94	71.597	Vicugna_pacos
ENSMLUG00000022233	-	98	71.285	ENSVVUG00000012789	-	94	72.978	Vulpes_vulpes