EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000022321 (Gene tree)
Gene ID: 102437399
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX53
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 1917 bases
Position: chrGL429843:3400499-3402415
Accession: 102437399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000019521	KH_1	PF00013.29	4.3e-13	1	1
ENSMLUP00000019521	ResIII	PF04851.15	6.7e-06	1	1
ENSMLUP00000019521	DEAD	PF00270.29	9.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000030471	-	1917	XM_006090586	ENSMLUP00000019521	638 (aa)	XP_006090648	G1Q738

Gene Model

Click here to download ENSMLUG00000022321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000022321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000022321	-	94	69.752	ENSMLUG00000017604	-	89	70.648
ENSMLUG00000022321	-	55	32.976	ENSMLUG00000017607	DDX18	54	32.976
ENSMLUG00000022321	-	60	37.590	ENSMLUG00000003683	-	50	37.500
ENSMLUG00000022321	-	65	31.121	ENSMLUG00000007167	-	70	31.663
ENSMLUG00000022321	-	93	95.966	ENSMLUG00000022233	-	98	95.966
ENSMLUG00000022321	-	53	32.558	ENSMLUG00000004684	-	90	32.558
ENSMLUG00000022321	-	65	37.194	ENSMLUG00000011033	-	54	37.194
ENSMLUG00000022321	-	57	31.044	ENSMLUG00000003415	-	88	31.148
ENSMLUG00000022321	-	67	33.257	ENSMLUG00000016730	DDX59	70	33.257
ENSMLUG00000022321	-	51	32.923	ENSMLUG00000009585	-	92	32.923
ENSMLUG00000022321	-	55	31.180	ENSMLUG00000003671	DDX6	72	31.180
ENSMLUG00000022321	-	58	39.075	ENSMLUG00000010216	DDX3X	60	38.366
ENSMLUG00000022321	-	58	30.831	ENSMLUG00000000939	-	85	30.831
ENSMLUG00000022321	-	64	34.360	ENSMLUG00000006610	DDX41	66	34.360
ENSMLUG00000022321	-	70	43.207	ENSMLUG00000013151	DDX17	68	43.207
ENSMLUG00000022321	-	58	30.027	ENSMLUG00000009280	-	84	30.027
ENSMLUG00000022321	-	52	31.722	ENSMLUG00000024690	-	91	31.722
ENSMLUG00000022321	-	58	30.831	ENSMLUG00000028448	-	85	30.667
ENSMLUG00000022321	-	65	31.193	ENSMLUG00000024480	-	86	31.193
ENSMLUG00000022321	-	54	33.618	ENSMLUG00000012159	DDX49	72	33.618
ENSMLUG00000022321	-	61	37.783	ENSMLUG00000001189	DDX4	54	37.783
ENSMLUG00000022321	-	58	30.563	ENSMLUG00000026217	-	85	30.563
ENSMLUG00000022321	-	68	43.151	ENSMLUG00000009496	DDX5	66	42.478
ENSMLUG00000022321	-	54	36.522	ENSMLUG00000003163	DDX47	74	36.522
ENSMLUG00000022321	-	58	30.831	ENSMLUG00000029622	-	85	30.831
ENSMLUG00000022321	-	54	32.174	ENSMLUG00000012233	-	82	32.174
ENSMLUG00000022321	-	54	32.370	ENSMLUG00000016392	EIF4A2	83	32.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000022321	-	94	69.767	ENSAMEG00000019953	-	95	70.326	Ailuropoda_melanoleuca
ENSMLUG00000022321	-	91	70.478	ENSBTAG00000046635	-	90	71.352	Bos_taurus
ENSMLUG00000022321	-	60	74.278	ENSCAFG00020005312	-	82	74.084	Canis_lupus_dingo
ENSMLUG00000022321	-	97	69.305	ENSCHIG00000020582	-	100	67.840	Capra_hircus
ENSMLUG00000022321	-	99	64.448	ENSCPOG00000013960	-	89	68.421	Cavia_porcellus
ENSMLUG00000022321	-	94	67.374	ENSCLAG00000017424	-	88	67.839	Chinchilla_lanigera
ENSMLUG00000022321	-	100	69.749	ENSEASG00005001728	-	97	68.858	Equus_asinus_asinus
ENSMLUG00000022321	-	99	68.917	ENSECAG00000035665	-	100	68.603	Equus_caballus
ENSMLUG00000022321	-	99	69.074	ENSECAG00000037015	DDX53	100	68.760	Equus_caballus
ENSMLUG00000022321	-	50	86.364	ENSEEUG00000008838	-	66	86.364	Erinaceus_europaeus
ENSMLUG00000022321	-	77	70.672	ENSFDAG00000020660	-	96	70.672	Fukomys_damarensis
ENSMLUG00000022321	-	68	64.203	ENSFDAG00000018215	-	83	67.092	Fukomys_damarensis
ENSMLUG00000022321	-	97	69.427	ENSSTOG00000027719	-	77	71.478	Ictidomys_tridecemlineatus
ENSMLUG00000022321	-	99	69.074	ENSLAFG00000011531	-	99	68.711	Loxodonta_africana
ENSMLUG00000022321	-	94	72.074	ENSMPUG00000019441	-	95	72.727	Mustela_putorius_furo
ENSMLUG00000022321	-	99	65.835	ENSOCUG00000004437	-	100	65.469	Oryctolagus_cuniculus
ENSMLUG00000022321	-	92	67.731	ENSOGAG00000026282	-	91	67.931	Otolemur_garnettii
ENSMLUG00000022321	-	96	70.033	ENSOARG00000016525	-	99	68.548	Ovis_aries
ENSMLUG00000022321	-	99	69.055	ENSPPRG00000011327	-	99	68.293	Panthera_pardus
ENSMLUG00000022321	-	99	68.855	ENSPTIG00000001243	-	99	68.092	Panthera_tigris_altaica
ENSMLUG00000022321	-	99	71.743	ENSPVAG00000001484	-	99	72.841	Pteropus_vampyrus
ENSMLUG00000022321	-	99	71.429	ENSSSCG00000012169	-	100	71.272	Sus_scrofa
ENSMLUG00000022321	-	55	48.588	ENSTBEG00000001513	-	84	48.780	Tupaia_belangeri
ENSMLUG00000022321	-	94	66.389	ENSTBEG00000014650	-	91	67.010	Tupaia_belangeri
ENSMLUG00000022321	-	99	63.537	ENSTTRG00000016514	-	99	63.537	Tursiops_truncatus
ENSMLUG00000022321	-	94	72.591	ENSUAMG00000000177	-	93	72.987	Ursus_americanus
ENSMLUG00000022321	-	58	78.820	ENSUMAG00000011448	-	84	78.820	Ursus_maritimus
ENSMLUG00000022321	-	99	69.859	ENSVPAG00000007860	-	99	68.750	Vicugna_pacos
ENSMLUG00000022321	-	95	70.462	ENSVVUG00000012789	-	94	72.041	Vulpes_vulpes