EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000024124 (Gene tree)
Gene ID: 102440735
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 5B-like
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 1482 bases
Position: chrGL430012:592639-594120
Accession: 102440735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000018175	zf-C2H2	PF00096.26	2.1e-24	1	5
ENSMLUP00000018175	zf-C2H2	PF00096.26	2.1e-24	2	5
ENSMLUP00000018175	zf-C2H2	PF00096.26	2.1e-24	3	5
ENSMLUP00000018175	zf-C2H2	PF00096.26	2.1e-24	4	5
ENSMLUP00000018175	zf-C2H2	PF00096.26	2.1e-24	5	5
ENSMLUP00000018175	zf-met	PF12874.7	1.6e-05	1	2
ENSMLUP00000018175	zf-met	PF12874.7	1.6e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000023303	-	1482	XM_006098706	ENSMLUP00000018175	494 (aa)	XP_006098768	G1Q392

Gene Model

Click here to download ENSMLUG00000024124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000024124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000024124	-	92	85.591	ENSMLUG00000029894	-	99	85.591
ENSMLUG00000024124	-	56	47.619	ENSMLUG00000002894	ZNF454	94	47.619
ENSMLUG00000024124	-	53	41.727	ENSMLUG00000012039	ZNF317	76	43.165
ENSMLUG00000024124	-	70	90.854	ENSMLUG00000006448	-	97	90.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000024124	-	82	44.175	ENSCHIG00000015589	-	99	44.318	Capra_hircus
ENSMLUG00000024124	-	91	43.297	ENSCHIG00000014993	-	91	43.297	Capra_hircus
ENSMLUG00000024124	-	91	43.297	ENSCHIG00000024202	-	91	45.455	Capra_hircus
ENSMLUG00000024124	-	99	47.628	ENSDNOG00000010100	-	99	47.628	Dasypus_novemcinctus
ENSMLUG00000024124	-	100	49.004	ENSEASG00005020480	-	100	49.004	Equus_asinus_asinus
ENSMLUG00000024124	-	99	49.222	ENSECAG00000006782	-	99	49.222	Equus_caballus
ENSMLUG00000024124	-	99	45.547	ENSFCAG00000041174	-	99	45.547	Felis_catus
ENSMLUG00000024124	-	95	37.605	ENSMAUG00000015051	Zscan5b	97	37.605	Mesocricetus_auratus
ENSMLUG00000024124	-	100	47.316	ENSMPUG00000006686	-	100	47.316	Mustela_putorius_furo
ENSMLUG00000024124	-	99	40.900	ENSOGAG00000011347	-	99	40.900	Otolemur_garnettii
ENSMLUG00000024124	-	98	40.501	ENSOGAG00000026429	-	98	40.501	Otolemur_garnettii
ENSMLUG00000024124	-	99	46.263	ENSPTIG00000015051	-	99	46.263	Panthera_tigris_altaica
ENSMLUG00000024124	-	100	51.690	ENSPVAG00000017654	-	99	51.690	Pteropus_vampyrus
ENSMLUG00000024124	-	57	50.350	ENSVPAG00000002606	-	98	50.350	Vicugna_pacos