EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000025849 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 680 bases
Position: chrGL429805:28190-28869
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000020969	LSM	PF01423.22	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000024261	-	612	-	ENSMLUP00000020969	203 (aa)	-	G1QB86

Gene Model

Click here to download ENSMLUG00000025849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000025849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000025849	-	73	63.057	ENSMLUG00000023361	-	84	61.275
ENSMLUG00000025849	-	58	65.873	ENSMLUG00000016951	SNRPB	85	56.373
ENSMLUG00000025849	-	99	72.195	ENSMLUG00000024428	-	89	73.770

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000025849	-	73	63.291	ENSG00000128739	SNRPN	81	85.417	Homo_sapiens
ENSMLUG00000025849	-	73	63.057	ENSAMEG00000007034	SNRPN	84	60.784	Ailuropoda_melanoleuca
ENSMLUG00000025849	-	73	63.057	ENSANAG00000034241	SNRPN	85	60.784	Aotus_nancymaae
ENSMLUG00000025849	-	78	61.677	ENSBTAG00000008251	SNRPN	92	61.275	Bos_taurus
ENSMLUG00000025849	-	72	63.462	ENSCJAG00000042622	-	90	59.009	Callithrix_jacchus
ENSMLUG00000025849	-	73	63.057	ENSCJAG00000003759	-	85	60.784	Callithrix_jacchus
ENSMLUG00000025849	-	73	63.057	ENSCAFG00000010127	SNRPN	85	60.784	Canis_familiaris
ENSMLUG00000025849	-	73	63.057	ENSCAFG00020024075	SNRPN	85	60.784	Canis_lupus_dingo
ENSMLUG00000025849	-	78	61.677	ENSCHIG00000017477	SNRPN	89	61.275	Capra_hircus
ENSMLUG00000025849	-	73	63.057	ENSTSYG00000005248	SNRPN	85	60.784	Carlito_syrichta
ENSMLUG00000025849	-	73	63.057	ENSCAPG00000003047	SNRPN	85	60.784	Cavia_aperea
ENSMLUG00000025849	-	73	63.057	ENSCPOG00000020270	SNRPN	85	60.784	Cavia_porcellus
ENSMLUG00000025849	-	73	63.057	ENSCCAG00000024231	SNRPN	85	60.784	Cebus_capucinus
ENSMLUG00000025849	-	73	63.057	ENSCATG00000032518	SNRPN	85	60.784	Cercocebus_atys
ENSMLUG00000025849	-	73	63.057	ENSCLAG00000011376	SNRPN	85	60.784	Chinchilla_lanigera
ENSMLUG00000025849	-	73	63.057	ENSCSAG00000006406	SNRPN	85	60.784	Chlorocebus_sabaeus
ENSMLUG00000025849	-	72	62.821	ENSCHOG00000001846	SNRPN	77	60.784	Choloepus_hoffmanni
ENSMLUG00000025849	-	73	63.057	ENSCANG00000041156	SNRPN	85	60.784	Colobus_angolensis_palliatus
ENSMLUG00000025849	-	72	63.462	ENSCGRG00001004136	Snrpn	85	60.784	Cricetulus_griseus_chok1gshd
ENSMLUG00000025849	-	73	63.057	ENSCGRG00000001621	Snrpn	85	60.784	Cricetulus_griseus_crigri
ENSMLUG00000025849	-	74	60.127	ENSCVAG00000014193	SNRPN	66	59.748	Cyprinodon_variegatus
ENSMLUG00000025849	-	73	62.420	ENSDNOG00000037060	SNRPN	84	59.804	Dasypus_novemcinctus
ENSMLUG00000025849	-	73	63.057	ENSDORG00000004527	Snrpn	85	61.275	Dipodomys_ordii
ENSMLUG00000025849	-	73	63.057	ENSEASG00005017871	SNRPN	85	60.784	Equus_asinus_asinus
ENSMLUG00000025849	-	73	63.057	ENSECAG00000018148	SNRPN	85	60.784	Equus_caballus
ENSMLUG00000025849	-	73	63.057	ENSEEUG00000007440	-	85	60.784	Erinaceus_europaeus
ENSMLUG00000025849	-	73	63.057	ENSFCAG00000022298	-	86	60.784	Felis_catus
ENSMLUG00000025849	-	73	63.057	ENSFDAG00000016578	-	86	61.275	Fukomys_damarensis
ENSMLUG00000025849	-	78	53.409	ENSFDAG00000010528	-	88	53.333	Fukomys_damarensis
ENSMLUG00000025849	-	73	63.057	ENSGGOG00000003988	SNRPN	85	60.784	Gorilla_gorilla
ENSMLUG00000025849	-	58	59.524	ENSGGOG00000024469	-	63	59.524	Gorilla_gorilla
ENSMLUG00000025849	-	100	56.306	ENSHGLG00000002327	-	95	56.757	Heterocephalus_glaber_female
ENSMLUG00000025849	-	58	65.873	ENSHGLG00000019812	-	85	56.098	Heterocephalus_glaber_female
ENSMLUG00000025849	-	73	63.057	ENSHGLG00000011924	SNRPN	85	60.784	Heterocephalus_glaber_female
ENSMLUG00000025849	-	58	61.111	ENSHGLG00000020936	-	95	55.455	Heterocephalus_glaber_female
ENSMLUG00000025849	-	73	63.057	ENSHGLG00100016559	SNRPN	85	60.784	Heterocephalus_glaber_male
ENSMLUG00000025849	-	100	56.364	ENSHGLG00100004881	-	95	56.364	Heterocephalus_glaber_male
ENSMLUG00000025849	-	58	65.873	ENSHGLG00100021056	-	85	56.098	Heterocephalus_glaber_male
ENSMLUG00000025849	-	73	63.057	ENSSTOG00000001339	SNRPN	85	60.784	Ictidomys_tridecemlineatus
ENSMLUG00000025849	-	73	63.057	ENSLAFG00000009458	SNRPN	85	61.275	Loxodonta_africana
ENSMLUG00000025849	-	73	63.057	ENSMFAG00000042235	SNRPN	89	59.009	Macaca_fascicularis
ENSMLUG00000025849	-	73	63.057	ENSMMUG00000023139	SNURF	89	59.009	Macaca_mulatta
ENSMLUG00000025849	-	73	63.057	ENSMNEG00000031291	SNRPN	85	60.784	Macaca_nemestrina
ENSMLUG00000025849	-	73	63.057	ENSMLEG00000038837	SNRPN	85	60.784	Mandrillus_leucophaeus
ENSMLUG00000025849	-	56	65.574	ENSMGAG00000008696	SNRPN	84	54.589	Meleagris_gallopavo
ENSMLUG00000025849	-	73	63.057	ENSMAUG00000000051	Snrpn	94	59.009	Mesocricetus_auratus
ENSMLUG00000025849	-	73	63.057	ENSMICG00000042356	SNRPN	85	60.784	Microcebus_murinus
ENSMLUG00000025849	-	73	63.057	ENSMOCG00000015350	Snrpn	87	60.784	Microtus_ochrogaster
ENSMLUG00000025849	-	58	68.254	ENSMODG00000013926	-	67	60.606	Monodelphis_domestica
ENSMLUG00000025849	-	73	63.057	MGP_CAROLIEiJ_G0029815	Snrpn	85	60.784	Mus_caroli
ENSMLUG00000025849	-	73	63.057	ENSMUSG00000102252	Snrpn	85	60.784	Mus_musculus
ENSMLUG00000025849	-	73	63.057	MGP_PahariEiJ_G0013040	Snrpn	85	60.784	Mus_pahari
ENSMLUG00000025849	-	73	63.057	MGP_SPRETEiJ_G0030918	Snrpn	85	60.784	Mus_spretus
ENSMLUG00000025849	-	52	54.386	ENSMPUG00000007115	-	58	53.226	Mustela_putorius_furo
ENSMLUG00000025849	-	73	63.057	ENSMPUG00000014638	-	85	60.784	Mustela_putorius_furo
ENSMLUG00000025849	-	73	63.057	ENSNGAG00000000181	Snrpn	85	60.784	Nannospalax_galili
ENSMLUG00000025849	-	100	63.721	ENSODEG00000016065	-	86	63.684	Octodon_degus
ENSMLUG00000025849	-	73	62.420	ENSODEG00000020110	-	85	60.784	Octodon_degus
ENSMLUG00000025849	-	73	63.057	ENSODEG00000013478	-	85	61.275	Octodon_degus
ENSMLUG00000025849	-	73	63.057	ENSODEG00000019708	-	86	61.275	Octodon_degus
ENSMLUG00000025849	-	87	60.697	ENSOCUG00000003532	-	85	60.488	Oryctolagus_cuniculus
ENSMLUG00000025849	-	58	66.667	ENSORLG00020007490	SNRPN	66	59.748	Oryzias_latipes_hni
ENSMLUG00000025849	-	58	66.667	ENSORLG00015003332	SNRPN	66	59.748	Oryzias_latipes_hsok
ENSMLUG00000025849	-	58	67.460	ENSOMEG00000002066	SNRPN	66	60.377	Oryzias_melastigma
ENSMLUG00000025849	-	73	63.057	ENSOGAG00000007392	SNRPN	85	60.784	Otolemur_garnettii
ENSMLUG00000025849	-	78	61.677	ENSOARG00000009080	SNRPN	85	61.275	Ovis_aries
ENSMLUG00000025849	-	100	49.763	ENSPPAG00000034049	-	58	59.524	Pan_paniscus
ENSMLUG00000025849	-	73	63.057	ENSPPAG00000027650	SNRPN	89	59.009	Pan_paniscus
ENSMLUG00000025849	-	73	63.057	ENSPPRG00000019878	-	85	60.784	Panthera_pardus
ENSMLUG00000025849	-	88	45.699	ENSPPRG00000006957	-	70	50.000	Panthera_pardus
ENSMLUG00000025849	-	58	69.841	ENSPTIG00000004537	SNRPN	85	60.294	Panthera_tigris_altaica
ENSMLUG00000025849	-	73	63.057	ENSPTRG00000006826	SNRPN	89	59.009	Pan_troglodytes
ENSMLUG00000025849	-	100	50.237	ENSPTRG00000052400	-	58	60.317	Pan_troglodytes
ENSMLUG00000025849	-	73	63.057	ENSPANG00000020142	SNRPN	85	60.784	Papio_anubis
ENSMLUG00000025849	-	58	53.968	ENSPEMG00000013920	-	84	49.282	Peromyscus_maniculatus_bairdii
ENSMLUG00000025849	-	73	63.057	ENSPEMG00000012911	-	85	60.784	Peromyscus_maniculatus_bairdii
ENSMLUG00000025849	-	72	61.538	ENSPEMG00000020979	-	85	59.314	Peromyscus_maniculatus_bairdii
ENSMLUG00000025849	-	73	61.783	ENSPCIG00000004699	-	51	61.875	Phascolarctos_cinereus
ENSMLUG00000025849	-	58	66.667	ENSPMEG00000020674	SNRPN	68	59.748	Poecilia_mexicana
ENSMLUG00000025849	-	73	63.057	ENSPPYG00000006269	SNURF	85	60.784	Pongo_abelii
ENSMLUG00000025849	-	73	63.057	ENSPCOG00000014231	SNRPN	85	60.784	Propithecus_coquereli
ENSMLUG00000025849	-	73	63.057	ENSRNOG00000059764	Snrpn	85	60.784	Rattus_norvegicus
ENSMLUG00000025849	-	73	63.057	ENSRBIG00000041765	SNRPN	85	60.784	Rhinopithecus_bieti
ENSMLUG00000025849	-	73	63.057	ENSRROG00000035157	SNRPN	85	60.784	Rhinopithecus_roxellana
ENSMLUG00000025849	-	73	63.057	ENSSBOG00000000110	-	85	60.784	Saimiri_boliviensis_boliviensis
ENSMLUG00000025849	-	77	62.651	ENSSBOG00000024929	-	85	59.804	Saimiri_boliviensis_boliviensis
ENSMLUG00000025849	-	72	62.179	ENSSHAG00000010257	-	66	61.875	Sarcophilus_harrisii
ENSMLUG00000025849	-	73	63.057	ENSSSCG00000028124	SNRPN	88	61.275	Sus_scrofa
ENSMLUG00000025849	-	78	61.677	ENSTTRG00000010966	SNRPN	75	61.275	Tursiops_truncatus
ENSMLUG00000025849	-	72	63.462	ENSUAMG00000016284	SNRPN	71	60.784	Ursus_americanus
ENSMLUG00000025849	-	73	63.057	ENSUMAG00000025589	SNRPN	85	60.784	Ursus_maritimus
ENSMLUG00000025849	-	73	63.057	ENSVVUG00000017971	SNRPN	84	60.784	Vulpes_vulpes