EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000026269 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 321 bases
Position: chrGL429807:3852083-3852403
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000017047	LSM	PF01423.22	7.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000029393	-	321	-	ENSMLUP00000017047	106 (aa)	-	G1Q015

Gene Model

Click here to download ENSMLUG00000026269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000026269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000026269	-	70	79.730	ENSMLUG00000013577	-	100	81.176
ENSMLUG00000026269	-	78	73.494	ENSMLUG00000027932	-	89	75.532
ENSMLUG00000026269	-	78	73.494	ENSMLUG00000029201	-	89	75.532
ENSMLUG00000026269	-	62	42.424	ENSMLUG00000026355	LSM6	83	42.424
ENSMLUG00000026269	-	78	73.494	ENSMLUG00000026149	-	89	75.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000026269	-	71	78.667	ENSG00000139343	SNRPF	100	80.233	Homo_sapiens
ENSMLUG00000026269	-	70	77.027	ENSAPOG00000003377	snrpf	66	78.824	Acanthochromis_polyacanthus
ENSMLUG00000026269	-	72	69.737	ENSAMEG00000018718	-	100	72.093	Ailuropoda_melanoleuca
ENSMLUG00000026269	-	70	79.730	ENSAMEG00000002166	-	100	81.176	Ailuropoda_melanoleuca
ENSMLUG00000026269	-	69	76.712	ENSACIG00000013216	snrpf	99	78.571	Amphilophus_citrinellus
ENSMLUG00000026269	-	69	76.712	ENSAOCG00000015108	snrpf	99	78.571	Amphiprion_ocellaris
ENSMLUG00000026269	-	69	76.712	ENSAPEG00000022022	snrpf	99	78.571	Amphiprion_percula
ENSMLUG00000026269	-	69	76.712	ENSATEG00000022625	snrpf	90	78.571	Anabas_testudineus
ENSMLUG00000026269	-	70	78.378	ENSACAG00000014073	SNRPF	98	80.000	Anolis_carolinensis
ENSMLUG00000026269	-	67	73.239	ENSANAG00000020297	-	75	75.610	Aotus_nancymaae
ENSMLUG00000026269	-	71	78.667	ENSANAG00000032845	SNRPF	100	80.233	Aotus_nancymaae
ENSMLUG00000026269	-	71	58.667	ENSANAG00000025860	-	100	61.628	Aotus_nancymaae
ENSMLUG00000026269	-	69	76.712	ENSACLG00000016066	snrpf	99	78.571	Astatotilapia_calliptera
ENSMLUG00000026269	-	71	73.333	ENSAMXG00000007421	snrpf	100	75.581	Astyanax_mexicanus
ENSMLUG00000026269	-	71	78.667	ENSBTAG00000016271	SNRPF	100	80.233	Bos_taurus
ENSMLUG00000026269	-	74	73.077	ENSBTAG00000050012	-	93	72.000	Bos_taurus
ENSMLUG00000026269	-	76	56.790	WBGene00004918	snr-5	93	55.952	Caenorhabditis_elegans
ENSMLUG00000026269	-	71	78.667	ENSCJAG00000002705	-	100	80.233	Callithrix_jacchus
ENSMLUG00000026269	-	69	75.342	ENSCAFG00000031151	-	95	79.268	Canis_familiaris
ENSMLUG00000026269	-	72	77.632	ENSCAFG00000006395	-	78	79.310	Canis_familiaris
ENSMLUG00000026269	-	74	69.231	ENSCAFG00020013161	-	74	75.714	Canis_lupus_dingo
ENSMLUG00000026269	-	69	75.342	ENSCAFG00020010823	-	95	79.268	Canis_lupus_dingo
ENSMLUG00000026269	-	75	76.250	ENSTSYG00000031636	-	67	76.250	Carlito_syrichta
ENSMLUG00000026269	-	71	68.000	ENSTSYG00000030635	-	100	70.930	Carlito_syrichta
ENSMLUG00000026269	-	71	75.000	ENSTSYG00000036502	-	100	77.011	Carlito_syrichta
ENSMLUG00000026269	-	70	79.730	ENSCAPG00000007242	SNRPF	100	81.176	Cavia_aperea
ENSMLUG00000026269	-	71	78.667	ENSCPOG00000013898	SNRPF	100	80.233	Cavia_porcellus
ENSMLUG00000026269	-	71	78.667	ENSCCAG00000037378	-	100	80.233	Cebus_capucinus
ENSMLUG00000026269	-	81	79.070	ENSCCAG00000017356	-	100	79.070	Cebus_capucinus
ENSMLUG00000026269	-	93	63.636	ENSCCAG00000033627	-	78	63.636	Cebus_capucinus
ENSMLUG00000026269	-	70	79.730	ENSCLAG00000007200	SNRPF	100	80.233	Chinchilla_lanigera
ENSMLUG00000026269	-	78	73.494	ENSCSAG00000003602	-	76	75.532	Chlorocebus_sabaeus
ENSMLUG00000026269	-	60	79.688	ENSCHOG00000009392	SNRPF	100	79.688	Choloepus_hoffmanni
ENSMLUG00000026269	-	71	74.667	ENSCPBG00000006227	-	100	75.581	Chrysemys_picta_bellii
ENSMLUG00000026269	-	81	70.930	ENSCPBG00000026463	-	100	70.930	Chrysemys_picta_bellii
ENSMLUG00000026269	-	81	69.767	ENSCPBG00000001985	-	100	69.767	Chrysemys_picta_bellii
ENSMLUG00000026269	-	80	76.471	ENSCPBG00000024287	-	67	76.471	Chrysemys_picta_bellii
ENSMLUG00000026269	-	80	72.941	ENSCSAVG00000007498	-	97	72.941	Ciona_savignyi
ENSMLUG00000026269	-	70	79.730	ENSCGRG00001017100	-	100	80.233	Cricetulus_griseus_chok1gshd
ENSMLUG00000026269	-	69	72.603	ENSCGRG00001008965	-	65	75.000	Cricetulus_griseus_chok1gshd
ENSMLUG00000026269	-	74	74.359	ENSCGRG00000018878	-	91	72.603	Cricetulus_griseus_crigri
ENSMLUG00000026269	-	70	79.730	ENSCGRG00000000336	-	100	80.233	Cricetulus_griseus_crigri
ENSMLUG00000026269	-	70	75.676	ENSCSEG00000004748	snrpf	100	76.744	Cynoglossus_semilaevis
ENSMLUG00000026269	-	70	77.027	ENSCVAG00000000397	snrpf	67	78.824	Cyprinodon_variegatus
ENSMLUG00000026269	-	71	74.026	ENSDARG00000105037	snrpf	100	76.136	Danio_rerio
ENSMLUG00000026269	-	78	73.494	ENSDNOG00000048989	-	84	75.532	Dasypus_novemcinctus
ENSMLUG00000026269	-	78	74.699	ENSDNOG00000043775	-	60	76.596	Dasypus_novemcinctus
ENSMLUG00000026269	-	89	62.766	ENSDNOG00000049373	-	89	63.810	Dasypus_novemcinctus
ENSMLUG00000026269	-	56	74.576	ENSDORG00000029740	-	85	77.143	Dipodomys_ordii
ENSMLUG00000026269	-	68	70.833	ENSDORG00000025351	-	100	70.833	Dipodomys_ordii
ENSMLUG00000026269	-	81	63.953	FBgn0000426	SmF	98	63.953	Drosophila_melanogaster
ENSMLUG00000026269	-	71	78.667	ENSETEG00000001558	-	100	80.233	Echinops_telfairi
ENSMLUG00000026269	-	72	64.935	ENSEBUG00000001793	-	72	68.657	Eptatretus_burgeri
ENSMLUG00000026269	-	71	78.667	ENSECAG00000019817	SNRPF	70	80.233	Equus_caballus
ENSMLUG00000026269	-	70	79.730	ENSEEUG00000013509	SNRPF	100	81.176	Erinaceus_europaeus
ENSMLUG00000026269	-	71	73.333	ENSELUG00000003121	RUXF	100	75.581	Esox_lucius
ENSMLUG00000026269	-	80	74.118	ENSELUG00000007737	RUXF	98	74.118	Esox_lucius
ENSMLUG00000026269	-	71	58.667	ENSFCAG00000021942	-	100	62.791	Felis_catus
ENSMLUG00000026269	-	71	78.667	ENSFCAG00000029966	-	100	80.233	Felis_catus
ENSMLUG00000026269	-	87	60.870	ENSFCAG00000031148	-	84	60.870	Felis_catus
ENSMLUG00000026269	-	70	79.730	ENSFALG00000010799	SNRPF	99	81.176	Ficedula_albicollis
ENSMLUG00000026269	-	71	78.667	ENSFDAG00000002831	-	100	80.233	Fukomys_damarensis
ENSMLUG00000026269	-	70	77.027	ENSFHEG00000003240	snrpf	75	78.824	Fundulus_heteroclitus
ENSMLUG00000026269	-	70	77.027	ENSGMOG00000007741	snrpf	100	78.824	Gadus_morhua
ENSMLUG00000026269	-	71	78.667	ENSGALG00000011409	SNRPF	100	80.233	Gallus_gallus
ENSMLUG00000026269	-	69	76.712	ENSGAFG00000016187	snrpf	97	78.571	Gambusia_affinis
ENSMLUG00000026269	-	70	75.676	ENSGACG00000020055	snrpf	100	77.647	Gasterosteus_aculeatus
ENSMLUG00000026269	-	68	69.333	ENSGAGG00000020974	-	63	69.333	Gopherus_agassizii
ENSMLUG00000026269	-	56	74.576	ENSGAGG00000011163	-	98	74.576	Gopherus_agassizii
ENSMLUG00000026269	-	75	73.418	ENSGAGG00000022991	-	89	73.418	Gopherus_agassizii
ENSMLUG00000026269	-	65	72.464	ENSGAGG00000014132	-	83	72.464	Gopherus_agassizii
ENSMLUG00000026269	-	70	75.676	ENSGAGG00000012945	-	82	73.626	Gopherus_agassizii
ENSMLUG00000026269	-	79	69.048	ENSGGOG00000039936	-	95	69.048	Gorilla_gorilla
ENSMLUG00000026269	-	71	78.667	ENSGGOG00000001127	-	100	80.233	Gorilla_gorilla
ENSMLUG00000026269	-	75	60.759	ENSGGOG00000039564	-	90	58.667	Gorilla_gorilla
ENSMLUG00000026269	-	71	78.667	ENSHGLG00000009108	SNRPF	100	80.233	Heterocephalus_glaber_female
ENSMLUG00000026269	-	71	80.000	ENSHGLG00000021172	-	100	81.395	Heterocephalus_glaber_female
ENSMLUG00000026269	-	71	80.000	ENSHGLG00100019596	-	100	81.395	Heterocephalus_glaber_male
ENSMLUG00000026269	-	70	79.730	ENSHGLG00100008103	-	100	81.176	Heterocephalus_glaber_male
ENSMLUG00000026269	-	59	70.000	ENSHCOG00000018663	snrpf	55	70.000	Hippocampus_comes
ENSMLUG00000026269	-	71	76.000	ENSIPUG00000018994	snrpf	100	77.907	Ictalurus_punctatus
ENSMLUG00000026269	-	71	78.667	ENSSTOG00000010434	-	100	80.233	Ictidomys_tridecemlineatus
ENSMLUG00000026269	-	81	66.279	ENSJJAG00000004558	-	100	66.279	Jaculus_jaculus
ENSMLUG00000026269	-	71	78.667	ENSJJAG00000011272	-	100	80.233	Jaculus_jaculus
ENSMLUG00000026269	-	63	74.627	ENSJJAG00000004828	-	100	74.627	Jaculus_jaculus
ENSMLUG00000026269	-	81	67.442	ENSJJAG00000010502	-	100	67.442	Jaculus_jaculus
ENSMLUG00000026269	-	69	76.712	ENSKMAG00000013566	snrpf	98	78.571	Kryptolebias_marmoratus
ENSMLUG00000026269	-	71	74.667	ENSLBEG00000008800	snrpf	100	76.744	Labrus_bergylta
ENSMLUG00000026269	-	70	79.730	ENSLACG00000002456	-	73	81.176	Latimeria_chalumnae
ENSMLUG00000026269	-	71	73.333	ENSLOCG00000015744	snrpf	100	75.581	Lepisosteus_oculatus
ENSMLUG00000026269	-	70	79.730	ENSLAFG00000017426	SNRPF	99	81.176	Loxodonta_africana
ENSMLUG00000026269	-	69	75.342	ENSMAMG00000016593	snrpf	99	77.381	Mastacembelus_armatus
ENSMLUG00000026269	-	69	76.712	ENSMZEG00005014701	snrpf	99	78.571	Maylandia_zebra
ENSMLUG00000026269	-	77	73.171	ENSMGAG00000011453	-	84	75.269	Meleagris_gallopavo
ENSMLUG00000026269	-	59	77.778	ENSMAUG00000019737	-	100	79.730	Mesocricetus_auratus
ENSMLUG00000026269	-	78	60.241	ENSMAUG00000010289	-	96	60.241	Mesocricetus_auratus
ENSMLUG00000026269	-	59	77.778	ENSMAUG00000016909	-	100	79.730	Mesocricetus_auratus
ENSMLUG00000026269	-	71	73.333	ENSMAUG00000008799	-	100	75.581	Mesocricetus_auratus
ENSMLUG00000026269	-	71	78.667	ENSMICG00000012153	-	100	80.233	Microcebus_murinus
ENSMLUG00000026269	-	77	70.732	ENSMICG00000030494	-	75	73.404	Microcebus_murinus
ENSMLUG00000026269	-	62	66.667	ENSMOCG00000020220	-	100	67.089	Microtus_ochrogaster
ENSMLUG00000026269	-	71	78.667	ENSMOCG00000020437	Snrpf	100	80.233	Microtus_ochrogaster
ENSMLUG00000026269	-	71	68.000	ENSMOCG00000022166	-	90	69.880	Microtus_ochrogaster
ENSMLUG00000026269	-	70	75.676	ENSMMOG00000007127	snrpf	100	77.647	Mola_mola
ENSMLUG00000026269	-	77	74.390	ENSMODG00000008091	SNRPF	82	76.344	Monodelphis_domestica
ENSMLUG00000026269	-	69	76.712	ENSMALG00000012328	snrpf	99	78.571	Monopterus_albus
ENSMLUG00000026269	-	71	78.667	MGP_CAROLIEiJ_G0015735	-	100	80.233	Mus_caroli
ENSMLUG00000026269	-	71	78.667	ENSMUSG00000020018	Snrpf	100	80.233	Mus_musculus
ENSMLUG00000026269	-	71	78.667	MGP_PahariEiJ_G0031350	Snrpf	100	80.233	Mus_pahari
ENSMLUG00000026269	-	71	78.667	MGP_SPRETEiJ_G0016553	Snrpf	100	80.233	Mus_spretus
ENSMLUG00000026269	-	78	72.289	ENSMPUG00000007176	-	84	74.468	Mustela_putorius_furo
ENSMLUG00000026269	-	59	73.016	ENSNGAG00000005851	-	71	71.667	Nannospalax_galili
ENSMLUG00000026269	-	71	78.667	ENSNGAG00000024292	-	100	80.233	Nannospalax_galili
ENSMLUG00000026269	-	70	77.027	ENSNBRG00000011682	snrpf	87	78.824	Neolamprologus_brichardi
ENSMLUG00000026269	-	70	52.703	ENSMEUG00000000671	SNRPF	100	57.647	Notamacropus_eugenii
ENSMLUG00000026269	-	71	78.667	ENSODEG00000010328	-	100	80.233	Octodon_degus
ENSMLUG00000026269	-	70	79.730	ENSOCUG00000010925	SNRPF	75	81.176	Oryctolagus_cuniculus
ENSMLUG00000026269	-	70	74.324	ENSORLG00020008216	snrpf	100	76.471	Oryzias_latipes_hni
ENSMLUG00000026269	-	70	74.324	ENSORLG00015007418	snrpf	100	76.471	Oryzias_latipes_hsok
ENSMLUG00000026269	-	69	75.342	ENSOMEG00000003018	snrpf	99	77.381	Oryzias_melastigma
ENSMLUG00000026269	-	71	77.333	ENSOGAG00000030323	-	100	77.907	Otolemur_garnettii
ENSMLUG00000026269	-	88	67.010	ENSOARG00000011853	-	94	69.444	Ovis_aries
ENSMLUG00000026269	-	75	60.759	ENSPPAG00000037479	-	91	58.667	Pan_paniscus
ENSMLUG00000026269	-	79	69.048	ENSPPAG00000037544	-	95	69.048	Pan_paniscus
ENSMLUG00000026269	-	71	78.667	ENSPPRG00000005875	-	100	80.233	Panthera_pardus
ENSMLUG00000026269	-	79	63.095	ENSPPRG00000007449	-	86	63.095	Panthera_pardus
ENSMLUG00000026269	-	79	65.476	ENSPTIG00000005117	-	100	65.476	Panthera_tigris_altaica
ENSMLUG00000026269	-	71	78.667	ENSPTIG00000007520	SNRPF	100	80.233	Panthera_tigris_altaica
ENSMLUG00000026269	-	75	62.025	ENSPTRG00000047717	-	91	60.000	Pan_troglodytes
ENSMLUG00000026269	-	79	69.048	ENSPTRG00000043814	-	95	69.048	Pan_troglodytes
ENSMLUG00000026269	-	70	77.027	ENSPKIG00000014784	snrpf	93	78.824	Paramormyrops_kingsleyae
ENSMLUG00000026269	-	70	79.730	ENSPSIG00000016462	SNRPF	99	81.176	Pelodiscus_sinensis
ENSMLUG00000026269	-	70	75.676	ENSPMGG00000023548	snrpf	100	77.647	Periophthalmus_magnuspinnatus
ENSMLUG00000026269	-	71	78.667	ENSPEMG00000023326	Snrpf	100	80.233	Peromyscus_maniculatus_bairdii
ENSMLUG00000026269	-	69	76.712	ENSPLAG00000023932	snrpf	99	78.571	Poecilia_latipinna
ENSMLUG00000026269	-	69	76.712	ENSPMEG00000003377	snrpf	99	78.571	Poecilia_mexicana
ENSMLUG00000026269	-	69	76.712	ENSPREG00000022635	snrpf	97	78.571	Poecilia_reticulata
ENSMLUG00000026269	-	71	78.667	ENSPPYG00000004847	-	100	80.233	Pongo_abelii
ENSMLUG00000026269	-	71	78.667	ENSPCOG00000023833	-	100	80.233	Propithecus_coquereli
ENSMLUG00000026269	-	71	78.667	ENSPVAG00000009036	SNRPF	100	80.233	Pteropus_vampyrus
ENSMLUG00000026269	-	69	76.712	ENSPNYG00000021712	snrpf	99	78.571	Pundamilia_nyererei
ENSMLUG00000026269	-	69	75.342	ENSPNAG00000019117	snrpf	99	77.381	Pygocentrus_nattereri
ENSMLUG00000026269	-	71	78.667	ENSRNOG00000005556	Snrpf	100	80.233	Rattus_norvegicus
ENSMLUG00000026269	-	71	77.333	ENSRBIG00000030414	-	100	77.907	Rhinopithecus_bieti
ENSMLUG00000026269	-	71	77.333	ENSRROG00000021975	-	100	77.907	Rhinopithecus_roxellana
ENSMLUG00000026269	-	78	47.619	YPR182W	SMX3	98	47.619	Saccharomyces_cerevisiae
ENSMLUG00000026269	-	71	70.667	ENSSBOG00000032297	-	100	72.093	Saimiri_boliviensis_boliviensis
ENSMLUG00000026269	-	71	78.667	ENSSBOG00000012868	-	100	79.070	Saimiri_boliviensis_boliviensis
ENSMLUG00000026269	-	75	67.470	ENSSBOG00000027638	-	100	68.539	Saimiri_boliviensis_boliviensis
ENSMLUG00000026269	-	71	78.667	ENSSBOG00000036179	-	100	80.233	Saimiri_boliviensis_boliviensis
ENSMLUG00000026269	-	75	76.250	ENSSHAG00000012294	SNRPF	82	78.022	Sarcophilus_harrisii
ENSMLUG00000026269	-	60	78.125	ENSSFOG00015021523	snrpf	96	78.125	Scleropages_formosus
ENSMLUG00000026269	-	71	74.667	ENSSMAG00000005533	snrpf	99	76.744	Scophthalmus_maximus
ENSMLUG00000026269	-	61	76.923	ENSSDUG00000016283	snrpf	77	76.923	Seriola_dumerili
ENSMLUG00000026269	-	69	76.712	ENSSLDG00000005119	snrpf	100	76.744	Seriola_lalandi_dorsalis
ENSMLUG00000026269	-	75	56.250	ENSSLDG00000003885	-	88	59.722	Seriola_lalandi_dorsalis
ENSMLUG00000026269	-	69	79.452	ENSSPUG00000014590	-	99	80.952	Sphenodon_punctatus
ENSMLUG00000026269	-	70	77.027	ENSSPAG00000003283	snrpf	97	78.824	Stegastes_partitus
ENSMLUG00000026269	-	71	78.667	ENSSSCG00000000895	SNRPF	100	80.233	Sus_scrofa
ENSMLUG00000026269	-	54	71.930	ENSTRUG00000014956	snrpf	99	75.000	Takifugu_rubripes
ENSMLUG00000026269	-	71	74.667	ENSTNIG00000012672	snrpf	100	76.744	Tetraodon_nigroviridis
ENSMLUG00000026269	-	71	52.000	ENSTTRG00000006070	SNRPF	100	56.977	Tursiops_truncatus
ENSMLUG00000026269	-	71	78.667	ENSUAMG00000008176	-	100	80.233	Ursus_americanus
ENSMLUG00000026269	-	81	72.093	ENSUAMG00000001101	-	100	70.930	Ursus_americanus
ENSMLUG00000026269	-	71	70.667	ENSUMAG00000006177	-	100	69.767	Ursus_maritimus
ENSMLUG00000026269	-	71	78.667	ENSUMAG00000003528	-	100	80.233	Ursus_maritimus
ENSMLUG00000026269	-	71	78.667	ENSVPAG00000008712	-	100	80.233	Vicugna_pacos
ENSMLUG00000026269	-	74	73.077	ENSVVUG00000023821	-	96	72.000	Vulpes_vulpes
ENSMLUG00000026269	-	70	57.895	ENSXETG00000021630	snrpf	100	62.069	Xenopus_tropicalis
ENSMLUG00000026269	-	69	76.712	ENSXCOG00000013860	snrpf	97	78.571	Xiphophorus_couchianus
ENSMLUG00000026269	-	69	76.712	ENSXMAG00000015448	snrpf	99	78.571	Xiphophorus_maculatus