EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000029614 (Gene tree)
Gene ID: 102431719
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 81181 bases
Position: chrGL429769:9389630-9470810
Accession: 102431719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000022615	ResIII	PF04851.15	3.1e-12	1	1
ENSMLUP00000022615	DEAD	PF00270.29	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000023691	SMARCA1-201	3207	XM_006082129	ENSMLUP00000022615	1068 (aa)	XP_006082191	G1QFY2

Gene Model

Click here to download ENSMLUG00000029614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000029614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000029614	SMARCA1	54	42.034	ENSMLUG00000007573	CHD1L	61	42.034
ENSMLUG00000029614	SMARCA1	93	83.317	ENSMLUG00000000468	SMARCA5	93	83.317
ENSMLUG00000029614	SMARCA1	53	45.283	ENSMLUG00000030511	HELLS	65	45.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000029614	SMARCA1	100	94.030	ENSG00000102038	SMARCA1	100	94.590	Homo_sapiens
ENSMLUG00000029614	SMARCA1	92	81.212	ENSAPOG00000016035	smarca5	98	81.897	Acanthochromis_polyacanthus
ENSMLUG00000029614	SMARCA1	100	94.030	ENSAMEG00000015218	SMARCA1	98	95.252	Ailuropoda_melanoleuca
ENSMLUG00000029614	SMARCA1	86	81.679	ENSACIG00000016982	smarca5	99	81.978	Amphilophus_citrinellus
ENSMLUG00000029614	SMARCA1	92	81.212	ENSAOCG00000015578	smarca5	95	80.578	Amphiprion_ocellaris
ENSMLUG00000029614	SMARCA1	92	81.212	ENSAPEG00000011117	smarca5	99	81.671	Amphiprion_percula
ENSMLUG00000029614	SMARCA1	93	80.823	ENSATEG00000012894	smarca5	95	80.578	Anabas_testudineus
ENSMLUG00000029614	SMARCA1	93	90.261	ENSAPLG00000013149	SMARCA1	100	90.261	Anas_platyrhynchos
ENSMLUG00000029614	SMARCA1	98	86.705	ENSACAG00000011376	SMARCA1	95	88.966	Anolis_carolinensis
ENSMLUG00000029614	SMARCA1	100	88.993	ENSANAG00000023098	SMARCA1	100	89.552	Aotus_nancymaae
ENSMLUG00000029614	SMARCA1	93	81.325	ENSACLG00000025356	smarca5	95	81.113	Astatotilapia_calliptera
ENSMLUG00000029614	SMARCA1	97	78.654	ENSAMXG00000005709	smarca5	94	81.800	Astyanax_mexicanus
ENSMLUG00000029614	SMARCA1	88	85.805	ENSAMXG00000011227	smarca1	99	87.128	Astyanax_mexicanus
ENSMLUG00000029614	SMARCA1	99	93.290	ENSBTAG00000002292	SMARCA1	98	94.192	Bos_taurus
ENSMLUG00000029614	SMARCA1	93	62.450	WBGene00002169	isw-1	97	62.450	Caenorhabditis_elegans
ENSMLUG00000029614	SMARCA1	100	93.843	ENSCJAG00000002868	SMARCA1	100	94.403	Callithrix_jacchus
ENSMLUG00000029614	SMARCA1	100	85.807	ENSCAFG00000018673	SMARCA1	99	86.111	Canis_familiaris
ENSMLUG00000029614	SMARCA1	100	94.310	ENSCAFG00020001751	SMARCA1	98	95.347	Canis_lupus_dingo
ENSMLUG00000029614	SMARCA1	100	93.488	ENSCHIG00000009837	SMARCA1	98	94.288	Capra_hircus
ENSMLUG00000029614	SMARCA1	95	95.365	ENSTSYG00000004240	SMARCA1	98	94.478	Carlito_syrichta
ENSMLUG00000029614	SMARCA1	97	92.411	ENSCPOG00000013601	SMARCA1	96	93.744	Cavia_porcellus
ENSMLUG00000029614	SMARCA1	100	90.951	ENSCCAG00000030817	SMARCA1	100	91.511	Cebus_capucinus
ENSMLUG00000029614	SMARCA1	100	94.030	ENSCATG00000015921	SMARCA1	100	94.590	Cercocebus_atys
ENSMLUG00000029614	SMARCA1	98	92.776	ENSCLAG00000002171	SMARCA1	98	93.301	Chinchilla_lanigera
ENSMLUG00000029614	SMARCA1	100	93.750	ENSCSAG00000008460	SMARCA1	100	94.310	Chlorocebus_sabaeus
ENSMLUG00000029614	SMARCA1	97	88.196	ENSCPBG00000001146	SMARCA1	95	90.049	Chrysemys_picta_bellii
ENSMLUG00000029614	SMARCA1	93	71.144	ENSCING00000004110	swi/snf	98	71.542	Ciona_intestinalis
ENSMLUG00000029614	SMARCA1	92	71.935	ENSCSAVG00000004620	-	100	72.807	Ciona_savignyi
ENSMLUG00000029614	SMARCA1	100	94.123	ENSCANG00000007183	SMARCA1	100	94.683	Colobus_angolensis_palliatus
ENSMLUG00000029614	SMARCA1	100	91.892	ENSCGRG00001010776	Smarca1	98	92.505	Cricetulus_griseus_chok1gshd
ENSMLUG00000029614	SMARCA1	93	93.454	ENSCGRG00000015301	Smarca1	98	93.454	Cricetulus_griseus_crigri
ENSMLUG00000029614	SMARCA1	92	81.212	ENSCSEG00000000328	smarca5	95	80.777	Cynoglossus_semilaevis
ENSMLUG00000029614	SMARCA1	93	80.622	ENSCVAG00000008668	smarca5	99	81.228	Cyprinodon_variegatus
ENSMLUG00000029614	SMARCA1	94	83.155	ENSDARG00000012776	smarca1	98	83.155	Danio_rerio
ENSMLUG00000029614	SMARCA1	96	78.252	ENSDARG00000052348	smarca5	94	81.395	Danio_rerio
ENSMLUG00000029614	SMARCA1	96	92.906	ENSDNOG00000004315	SMARCA1	98	92.913	Dasypus_novemcinctus
ENSMLUG00000029614	SMARCA1	98	91.985	ENSDORG00000009270	Smarca1	98	92.614	Dipodomys_ordii
ENSMLUG00000029614	SMARCA1	92	71.010	FBgn0011604	Iswi	98	70.457	Drosophila_melanogaster
ENSMLUG00000029614	SMARCA1	77	93.750	ENSETEG00000017426	SMARCA1	85	93.750	Echinops_telfairi
ENSMLUG00000029614	SMARCA1	93	78.550	ENSEBUG00000001239	smarca5	96	78.953	Eptatretus_burgeri
ENSMLUG00000029614	SMARCA1	95	90.864	ENSEASG00005008218	SMARCA1	100	91.916	Equus_asinus_asinus
ENSMLUG00000029614	SMARCA1	100	93.860	ENSECAG00000012106	SMARCA1	98	94.697	Equus_caballus
ENSMLUG00000029614	SMARCA1	75	97.351	ENSEEUG00000014927	SMARCA1	83	97.351	Erinaceus_europaeus
ENSMLUG00000029614	SMARCA1	98	82.303	ENSELUG00000010515	smarca1	99	83.969	Esox_lucius
ENSMLUG00000029614	SMARCA1	100	95.051	ENSFCAG00000018496	SMARCA1	100	95.051	Felis_catus
ENSMLUG00000029614	SMARCA1	87	90.507	ENSFALG00000000209	SMARCA1	98	90.605	Ficedula_albicollis
ENSMLUG00000029614	SMARCA1	93	94.076	ENSFDAG00000009818	SMARCA1	98	94.478	Fukomys_damarensis
ENSMLUG00000029614	SMARCA1	93	81.024	ENSFHEG00000007687	smarca5	94	80.777	Fundulus_heteroclitus
ENSMLUG00000029614	SMARCA1	94	87.849	ENSGALG00000008431	SMARCA1	99	87.635	Gallus_gallus
ENSMLUG00000029614	SMARCA1	93	81.024	ENSGAFG00000017731	smarca5	95	80.777	Gambusia_affinis
ENSMLUG00000029614	SMARCA1	92	90.872	ENSGAGG00000023575	SMARCA1	100	90.872	Gopherus_agassizii
ENSMLUG00000029614	SMARCA1	70	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSMLUG00000029614	SMARCA1	98	92.395	ENSHGLG00000003080	SMARCA1	98	93.107	Heterocephalus_glaber_female
ENSMLUG00000029614	SMARCA1	94	92.906	ENSHGLG00100001102	SMARCA1	100	93.300	Heterocephalus_glaber_male
ENSMLUG00000029614	SMARCA1	93	81.048	ENSHCOG00000005458	smarca5	95	80.677	Hippocampus_comes
ENSMLUG00000029614	SMARCA1	96	78.198	ENSIPUG00000005229	SMARCA5	96	81.092	Ictalurus_punctatus
ENSMLUG00000029614	SMARCA1	95	82.681	ENSIPUG00000016905	Smarca1	99	84.693	Ictalurus_punctatus
ENSMLUG00000029614	SMARCA1	98	93.916	ENSSTOG00000014524	SMARCA1	98	94.302	Ictidomys_tridecemlineatus
ENSMLUG00000029614	SMARCA1	98	92.424	ENSJJAG00000002593	Smarca1	98	92.711	Jaculus_jaculus
ENSMLUG00000029614	SMARCA1	93	81.250	ENSKMAG00000003777	smarca5	95	80.876	Kryptolebias_marmoratus
ENSMLUG00000029614	SMARCA1	88	81.164	ENSLBEG00000013295	SMARCA1	100	82.112	Labrus_bergylta
ENSMLUG00000029614	SMARCA1	94	80.080	ENSLBEG00000018112	smarca5	95	80.378	Labrus_bergylta
ENSMLUG00000029614	SMARCA1	96	86.901	ENSLACG00000016697	SMARCA1	99	87.157	Latimeria_chalumnae
ENSMLUG00000029614	SMARCA1	98	82.568	ENSLOCG00000014591	smarca1	97	86.350	Lepisosteus_oculatus
ENSMLUG00000029614	SMARCA1	95	93.627	ENSLAFG00000000896	SMARCA1	100	93.627	Loxodonta_africana
ENSMLUG00000029614	SMARCA1	100	94.030	ENSMFAG00000002117	SMARCA1	100	94.590	Macaca_fascicularis
ENSMLUG00000029614	SMARCA1	100	94.030	ENSMMUG00000008818	SMARCA1	100	94.590	Macaca_mulatta
ENSMLUG00000029614	SMARCA1	100	94.030	ENSMNEG00000041768	SMARCA1	100	94.590	Macaca_nemestrina
ENSMLUG00000029614	SMARCA1	100	94.030	ENSMLEG00000043198	SMARCA1	100	94.590	Mandrillus_leucophaeus
ENSMLUG00000029614	SMARCA1	93	81.225	ENSMAMG00000014294	smarca5	95	80.976	Mastacembelus_armatus
ENSMLUG00000029614	SMARCA1	93	81.325	ENSMZEG00005009369	smarca5	95	81.113	Maylandia_zebra
ENSMLUG00000029614	SMARCA1	95	89.184	ENSMGAG00000007042	SMARCA1	100	89.184	Meleagris_gallopavo
ENSMLUG00000029614	SMARCA1	98	92.946	ENSMAUG00000008133	Smarca1	98	93.592	Mesocricetus_auratus
ENSMLUG00000029614	SMARCA1	100	94.304	ENSMICG00000015768	SMARCA1	100	94.304	Microcebus_murinus
ENSMLUG00000029614	SMARCA1	100	92.015	ENSMOCG00000009464	Smarca1	98	93.204	Microtus_ochrogaster
ENSMLUG00000029614	SMARCA1	94	78.685	ENSMMOG00000005547	smarca5	99	78.984	Mola_mola
ENSMLUG00000029614	SMARCA1	98	87.094	ENSMODG00000013187	-	99	87.094	Monodelphis_domestica
ENSMLUG00000029614	SMARCA1	93	80.847	ENSMALG00000002081	smarca5	98	79.960	Monopterus_albus
ENSMLUG00000029614	SMARCA1	100	92.472	MGP_CAROLIEiJ_G0033034	Smarca1	98	93.475	Mus_caroli
ENSMLUG00000029614	SMARCA1	100	92.658	ENSMUSG00000031099	Smarca1	98	93.742	Mus_musculus
ENSMLUG00000029614	SMARCA1	100	92.379	MGP_PahariEiJ_G0031579	Smarca1	98	93.342	Mus_pahari
ENSMLUG00000029614	SMARCA1	100	92.565	MGP_SPRETEiJ_G0034192	Smarca1	98	93.609	Mus_spretus
ENSMLUG00000029614	SMARCA1	100	94.123	ENSMPUG00000017423	SMARCA1	93	95.252	Mustela_putorius_furo
ENSMLUG00000029614	SMARCA1	96	93.023	ENSNGAG00000006492	Smarca1	98	93.786	Nannospalax_galili
ENSMLUG00000029614	SMARCA1	93	81.426	ENSNBRG00000004463	smarca5	99	81.213	Neolamprologus_brichardi
ENSMLUG00000029614	SMARCA1	100	93.377	ENSNLEG00000015179	SMARCA1	100	93.937	Nomascus_leucogenys
ENSMLUG00000029614	SMARCA1	89	80.398	ENSMEUG00000008819	SMARCA1	100	80.398	Notamacropus_eugenii
ENSMLUG00000029614	SMARCA1	96	92.704	ENSODEG00000012163	SMARCA1	98	93.100	Octodon_degus
ENSMLUG00000029614	SMARCA1	93	81.325	ENSONIG00000009993	smarca5	95	81.213	Oreochromis_niloticus
ENSMLUG00000029614	SMARCA1	92	90.872	ENSOANG00000002862	SMARCA1	100	90.872	Ornithorhynchus_anatinus
ENSMLUG00000029614	SMARCA1	98	92.220	ENSOCUG00000001047	SMARCA1	98	92.395	Oryctolagus_cuniculus
ENSMLUG00000029614	SMARCA1	93	81.149	ENSORLG00000021998	smarca5	95	80.777	Oryzias_latipes
ENSMLUG00000029614	SMARCA1	93	81.250	ENSORLG00020017679	smarca5	96	80.435	Oryzias_latipes_hni
ENSMLUG00000029614	SMARCA1	93	81.149	ENSORLG00015017210	smarca5	95	80.677	Oryzias_latipes_hsok
ENSMLUG00000029614	SMARCA1	93	81.149	ENSOMEG00000000086	smarca5	95	80.677	Oryzias_melastigma
ENSMLUG00000029614	SMARCA1	96	94.169	ENSOGAG00000004399	SMARCA1	98	94.369	Otolemur_garnettii
ENSMLUG00000029614	SMARCA1	95	95.759	ENSOARG00000014638	SMARCA1	100	96.154	Ovis_aries
ENSMLUG00000029614	SMARCA1	100	94.030	ENSPPAG00000034647	SMARCA1	100	94.590	Pan_paniscus
ENSMLUG00000029614	SMARCA1	100	95.238	ENSPPRG00000008929	SMARCA1	100	95.238	Panthera_pardus
ENSMLUG00000029614	SMARCA1	95	95.575	ENSPTIG00000000915	SMARCA1	98	95.575	Panthera_tigris_altaica
ENSMLUG00000029614	SMARCA1	100	94.030	ENSPTRG00000049876	SMARCA1	100	94.590	Pan_troglodytes
ENSMLUG00000029614	SMARCA1	100	94.030	ENSPANG00000003871	SMARCA1	100	94.590	Papio_anubis
ENSMLUG00000029614	SMARCA1	94	81.405	ENSPKIG00000013411	smarca1	98	84.458	Paramormyrops_kingsleyae
ENSMLUG00000029614	SMARCA1	95	89.852	ENSPSIG00000010101	SMARCA1	100	90.467	Pelodiscus_sinensis
ENSMLUG00000029614	SMARCA1	98	93.136	ENSPEMG00000017503	Smarca1	98	93.883	Peromyscus_maniculatus_bairdii
ENSMLUG00000029614	SMARCA1	95	89.360	ENSPCIG00000015460	SMARCA1	98	89.360	Phascolarctos_cinereus
ENSMLUG00000029614	SMARCA1	93	81.250	ENSPFOG00000007649	smarca5	95	80.777	Poecilia_formosa
ENSMLUG00000029614	SMARCA1	93	81.250	ENSPLAG00000003363	smarca5	95	80.777	Poecilia_latipinna
ENSMLUG00000029614	SMARCA1	93	81.149	ENSPMEG00000019849	smarca5	95	80.677	Poecilia_mexicana
ENSMLUG00000029614	SMARCA1	93	81.149	ENSPREG00000023250	smarca5	95	80.677	Poecilia_reticulata
ENSMLUG00000029614	SMARCA1	100	91.138	ENSPPYG00000020703	SMARCA1	100	91.698	Pongo_abelii
ENSMLUG00000029614	SMARCA1	74	86.486	ENSPCOG00000020722	SMARCA1	94	90.504	Propithecus_coquereli
ENSMLUG00000029614	SMARCA1	92	94.480	ENSPVAG00000003805	SMARCA1	94	94.480	Pteropus_vampyrus
ENSMLUG00000029614	SMARCA1	55	84.384	ENSPNYG00000012299	smarca5	92	83.200	Pundamilia_nyererei
ENSMLUG00000029614	SMARCA1	100	93.464	ENSRNOG00000003762	Smarca1	98	93.916	Rattus_norvegicus
ENSMLUG00000029614	SMARCA1	100	94.123	ENSRROG00000034167	SMARCA1	100	94.683	Rhinopithecus_roxellana
ENSMLUG00000029614	SMARCA1	96	94.106	ENSSBOG00000020641	SMARCA1	100	95.674	Saimiri_boliviensis_boliviensis
ENSMLUG00000029614	SMARCA1	92	84.498	ENSSHAG00000013518	SMARCA1	99	84.498	Sarcophilus_harrisii
ENSMLUG00000029614	SMARCA1	96	79.065	ENSSFOG00015016794	smarca5	100	81.402	Scleropages_formosus
ENSMLUG00000029614	SMARCA1	98	83.238	ENSSFOG00015009043	smarca1	100	83.238	Scleropages_formosus
ENSMLUG00000029614	SMARCA1	93	80.100	ENSSMAG00000004801	smarca5	95	80.400	Scophthalmus_maximus
ENSMLUG00000029614	SMARCA1	93	80.723	ENSSDUG00000020690	smarca5	97	80.020	Seriola_dumerili
ENSMLUG00000029614	SMARCA1	93	80.723	ENSSLDG00000025190	smarca5	97	80.020	Seriola_lalandi_dorsalis
ENSMLUG00000029614	SMARCA1	85	88.117	ENSSARG00000000842	SMARCA1	92	88.117	Sorex_araneus
ENSMLUG00000029614	SMARCA1	93	89.506	ENSSPUG00000000590	SMARCA1	95	89.415	Sphenodon_punctatus
ENSMLUG00000029614	SMARCA1	93	80.823	ENSSPAG00000002894	smarca5	97	81.897	Stegastes_partitus
ENSMLUG00000029614	SMARCA1	98	91.817	ENSSSCG00000012649	SMARCA1	98	94.095	Sus_scrofa
ENSMLUG00000029614	SMARCA1	93	90.161	ENSTGUG00000003899	-	100	90.161	Taeniopygia_guttata
ENSMLUG00000029614	SMARCA1	93	80.924	ENSTRUG00000014094	smarca5	95	80.677	Takifugu_rubripes
ENSMLUG00000029614	SMARCA1	92	80.303	ENSTNIG00000017717	smarca5	94	79.781	Tetraodon_nigroviridis
ENSMLUG00000029614	SMARCA1	93	88.295	ENSTBEG00000014973	SMARCA1	99	88.295	Tupaia_belangeri
ENSMLUG00000029614	SMARCA1	92	92.284	ENSTTRG00000006168	SMARCA1	99	92.690	Tursiops_truncatus
ENSMLUG00000029614	SMARCA1	100	93.843	ENSUAMG00000020201	SMARCA1	98	94.872	Ursus_americanus
ENSMLUG00000029614	SMARCA1	95	91.026	ENSUMAG00000004073	SMARCA1	97	98.054	Ursus_maritimus
ENSMLUG00000029614	SMARCA1	71	98.309	ENSVPAG00000010492	-	79	98.309	Vicugna_pacos
ENSMLUG00000029614	SMARCA1	95	95.858	ENSVVUG00000008878	SMARCA1	99	96.087	Vulpes_vulpes
ENSMLUG00000029614	SMARCA1	94	87.611	ENSXETG00000001526	smarca1	99	87.611	Xenopus_tropicalis
ENSMLUG00000029614	SMARCA1	93	80.924	ENSXCOG00000011170	smarca5	98	80.677	Xiphophorus_couchianus
ENSMLUG00000029614	SMARCA1	93	80.924	ENSXMAG00000009678	smarca5	97	82.613	Xiphophorus_maculatus