EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000000137 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 5878 bases
Position: chrKV751333.1:9831315-9837192
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000000163	RRM_1	PF00076.22	3.8e-31	1	2
ENSMMOP00000000163	RRM_1	PF00076.22	3.8e-31	2	2
ENSMMOP00000000170	RRM_1	PF00076.22	4.3e-18	1	1
ENSMMOP00000000168	RRM_1	PF00076.22	1.3e-17	1	1
ENSMMOP00000000172	RRM_1	PF00076.22	3.3e-07	1	1
ENSMMOP00000000166	RRM_1	PF00076.22	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000000173	-	492	-	ENSMMOP00000000170	163 (aa)	-	-
ENSMMOT00000000166	-	852	-	ENSMMOP00000000163	283 (aa)	-	-
ENSMMOT00000000175	-	417	-	ENSMMOP00000000172	138 (aa)	-	-
ENSMMOT00000000169	-	567	-	ENSMMOP00000000166	188 (aa)	-	-
ENSMMOT00000000171	-	534	-	ENSMMOP00000000168	177 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000000137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000000137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000000137	srsf5b	91	50.794	ENSMMOG00000013653	srsf4	78	52.193
ENSMMOG00000000137	srsf5b	62	39.444	ENSMMOG00000009349	srsf9	65	41.436
ENSMMOG00000000137	srsf5b	51	49.296	ENSMMOG00000015241	-	64	67.647
ENSMMOG00000000137	srsf5b	93	36.029	ENSMMOG00000014354	srsf1a	68	43.094
ENSMMOG00000000137	srsf5b	93	59.231	ENSMMOG00000009793	srsf5a	61	70.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000000137	srsf5b	97	61.481	ENSG00000100650	SRSF5	99	73.643	Homo_sapiens
ENSMMOG00000000137	srsf5b	80	96.154	ENSAPOG00000008642	srsf5b	96	77.338	Acanthochromis_polyacanthus
ENSMMOG00000000137	srsf5b	93	61.538	ENSAMEG00000014574	SRSF5	66	81.622	Ailuropoda_melanoleuca
ENSMMOG00000000137	srsf5b	97	81.618	ENSACIG00000010742	srsf5b	82	96.923	Amphilophus_citrinellus
ENSMMOG00000000137	srsf5b	80	96.154	ENSAOCG00000005719	srsf5b	96	77.338	Amphiprion_ocellaris
ENSMMOG00000000137	srsf5b	80	96.154	ENSAPEG00000007830	srsf5b	96	77.338	Amphiprion_percula
ENSMMOG00000000137	srsf5b	80	94.615	ENSATEG00000019112	srsf5b	63	96.216	Anabas_testudineus
ENSMMOG00000000137	srsf5b	89	63.710	ENSAPLG00000014681	SRSF5	67	80.645	Anas_platyrhynchos
ENSMMOG00000000137	srsf5b	93	63.846	ENSACAG00000005143	SRSF5	67	82.162	Anolis_carolinensis
ENSMMOG00000000137	srsf5b	97	61.481	ENSANAG00000027977	-	94	69.853	Aotus_nancymaae
ENSMMOG00000000137	srsf5b	94	61.069	ENSANAG00000037529	-	95	71.318	Aotus_nancymaae
ENSMMOG00000000137	srsf5b	80	96.154	ENSACLG00000026424	srsf5b	63	96.216	Astatotilapia_calliptera
ENSMMOG00000000137	srsf5b	91	80.392	ENSAMXG00000011932	srsf5b	99	77.124	Astyanax_mexicanus
ENSMMOG00000000137	srsf5b	93	61.538	ENSBTAG00000011596	SRSF5	66	81.622	Bos_taurus
ENSMMOG00000000137	srsf5b	97	61.481	ENSCJAG00000014884	SRSF5	94	69.853	Callithrix_jacchus
ENSMMOG00000000137	srsf5b	93	61.538	ENSCAFG00000016589	SRSF5	66	81.622	Canis_familiaris
ENSMMOG00000000137	srsf5b	93	61.538	ENSCAFG00020005661	SRSF5	66	81.622	Canis_lupus_dingo
ENSMMOG00000000137	srsf5b	93	61.538	ENSCHIG00000016794	SRSF5	95	69.030	Capra_hircus
ENSMMOG00000000137	srsf5b	97	60.741	ENSTSYG00000007786	SRSF5	94	69.853	Carlito_syrichta
ENSMMOG00000000137	srsf5b	93	61.538	ENSCAPG00000008801	SRSF5	65	81.622	Cavia_aperea
ENSMMOG00000000137	srsf5b	93	61.538	ENSCPOG00000039926	SRSF5	65	81.622	Cavia_porcellus
ENSMMOG00000000137	srsf5b	97	61.481	ENSCCAG00000029002	SRSF5	94	69.853	Cebus_capucinus
ENSMMOG00000000137	srsf5b	97	61.481	ENSCATG00000045051	SRSF5	94	69.853	Cercocebus_atys
ENSMMOG00000000137	srsf5b	93	61.538	ENSCLAG00000004755	SRSF5	96	68.519	Chinchilla_lanigera
ENSMMOG00000000137	srsf5b	93	61.538	ENSCSAG00000013041	SRSF5	66	81.622	Chlorocebus_sabaeus
ENSMMOG00000000137	srsf5b	93	61.538	ENSCPBG00000021653	SRSF5	67	82.162	Chrysemys_picta_bellii
ENSMMOG00000000137	srsf5b	97	61.481	ENSCANG00000030560	SRSF5	94	69.853	Colobus_angolensis_palliatus
ENSMMOG00000000137	srsf5b	93	61.538	ENSCGRG00001015339	Srsf5	67	81.622	Cricetulus_griseus_chok1gshd
ENSMMOG00000000137	srsf5b	93	61.538	ENSCGRG00000009833	Srsf5	67	81.622	Cricetulus_griseus_crigri
ENSMMOG00000000137	srsf5b	93	79.545	ENSCSEG00000003801	srsf5b	64	94.652	Cynoglossus_semilaevis
ENSMMOG00000000137	srsf5b	80	95.385	ENSCVAG00000017240	srsf5b	57	95.676	Cyprinodon_variegatus
ENSMMOG00000000137	srsf5b	99	74.691	ENSDARG00000027734	srsf5b	92	86.260	Danio_rerio
ENSMMOG00000000137	srsf5b	93	61.538	ENSDNOG00000006160	SRSF5	67	81.622	Dasypus_novemcinctus
ENSMMOG00000000137	srsf5b	93	61.538	ENSDORG00000003989	Srsf5	67	81.622	Dipodomys_ordii
ENSMMOG00000000137	srsf5b	79	71.875	ENSETEG00000020396	SRSF5	66	77.838	Echinops_telfairi
ENSMMOG00000000137	srsf5b	93	45.255	ENSEBUG00000006229	srsf5b	68	63.636	Eptatretus_burgeri
ENSMMOG00000000137	srsf5b	93	61.538	ENSEASG00005016615	SRSF5	66	81.622	Equus_asinus_asinus
ENSMMOG00000000137	srsf5b	97	60.741	ENSECAG00000026873	SRSF5	94	69.853	Equus_caballus
ENSMMOG00000000137	srsf5b	93	75.735	ENSELUG00000019852	srsf5b	99	67.059	Esox_lucius
ENSMMOG00000000137	srsf5b	97	60.741	ENSFCAG00000008848	SRSF5	94	69.853	Felis_catus
ENSMMOG00000000137	srsf5b	93	63.846	ENSFALG00000004979	SRSF5	67	80.000	Ficedula_albicollis
ENSMMOG00000000137	srsf5b	93	61.538	ENSFDAG00000011562	SRSF5	67	81.622	Fukomys_damarensis
ENSMMOG00000000137	srsf5b	80	96.154	ENSFHEG00000009476	srsf5b	91	76.429	Fundulus_heteroclitus
ENSMMOG00000000137	srsf5b	99	71.724	ENSGMOG00000000595	srsf5b	97	75.336	Gadus_morhua
ENSMMOG00000000137	srsf5b	97	62.222	ENSGALG00000009421	SRSF5	94	71.324	Gallus_gallus
ENSMMOG00000000137	srsf5b	94	75.540	ENSGACG00000007834	srsf5b	99	72.050	Gasterosteus_aculeatus
ENSMMOG00000000137	srsf5b	93	61.538	ENSGAGG00000004447	SRSF5	67	82.162	Gopherus_agassizii
ENSMMOG00000000137	srsf5b	97	61.481	ENSGGOG00000016462	SRSF5	94	69.853	Gorilla_gorilla
ENSMMOG00000000137	srsf5b	79	97.656	ENSHBUG00000012462	srsf5b	93	97.656	Haplochromis_burtoni
ENSMMOG00000000137	srsf5b	93	60.769	ENSHGLG00000010147	SRSF5	66	81.081	Heterocephalus_glaber_female
ENSMMOG00000000137	srsf5b	93	60.769	ENSHGLG00100015328	SRSF5	66	81.081	Heterocephalus_glaber_male
ENSMMOG00000000137	srsf5b	78	51.502	ENSHGLG00100000095	-	62	58.333	Heterocephalus_glaber_male
ENSMMOG00000000137	srsf5b	93	71.642	ENSHCOG00000005592	srsf5b	65	85.714	Hippocampus_comes
ENSMMOG00000000137	srsf5b	93	61.538	ENSSTOG00000020672	SRSF5	66	81.622	Ictidomys_tridecemlineatus
ENSMMOG00000000137	srsf5b	93	61.538	ENSJJAG00000001688	Srsf5	96	68.519	Jaculus_jaculus
ENSMMOG00000000137	srsf5b	80	96.154	ENSKMAG00000020486	srsf5b	95	88.889	Kryptolebias_marmoratus
ENSMMOG00000000137	srsf5b	80	93.939	ENSLBEG00000013647	srsf5b	70	86.408	Labrus_bergylta
ENSMMOG00000000137	srsf5b	93	64.615	ENSLACG00000005874	SRSF5	67	83.243	Latimeria_chalumnae
ENSMMOG00000000137	srsf5b	93	65.926	ENSLOCG00000012438	srsf5b	69	83.069	Lepisosteus_oculatus
ENSMMOG00000000137	srsf5b	93	60.769	ENSLAFG00000005260	SRSF5	66	81.081	Loxodonta_africana
ENSMMOG00000000137	srsf5b	97	61.481	ENSMFAG00000002393	SRSF5	94	69.853	Macaca_fascicularis
ENSMMOG00000000137	srsf5b	97	61.481	ENSMNEG00000030872	SRSF5	94	69.853	Macaca_nemestrina
ENSMMOG00000000137	srsf5b	97	61.481	ENSMLEG00000030017	SRSF5	94	69.853	Mandrillus_leucophaeus
ENSMMOG00000000137	srsf5b	80	95.385	ENSMAMG00000002673	srsf5b	99	76.451	Mastacembelus_armatus
ENSMMOG00000000137	srsf5b	80	96.154	ENSMZEG00005003550	srsf5b	63	96.216	Maylandia_zebra
ENSMMOG00000000137	srsf5b	51	76.552	ENSMGAG00000011835	SRSF5	62	75.342	Meleagris_gallopavo
ENSMMOG00000000137	srsf5b	93	61.538	ENSMAUG00000009544	Srsf5	66	81.622	Mesocricetus_auratus
ENSMMOG00000000137	srsf5b	97	60.741	ENSMICG00000037432	-	94	69.853	Microcebus_murinus
ENSMMOG00000000137	srsf5b	54	69.333	ENSMICG00000046738	-	71	90.278	Microcebus_murinus
ENSMMOG00000000137	srsf5b	93	62.308	ENSMOCG00000013134	Srsf5	66	81.622	Microtus_ochrogaster
ENSMMOG00000000137	srsf5b	93	61.538	ENSMODG00000011362	SRSF5	67	82.162	Monodelphis_domestica
ENSMMOG00000000137	srsf5b	97	79.412	ENSMALG00000021875	srsf5b	95	88.276	Monopterus_albus
ENSMMOG00000000137	srsf5b	93	61.538	ENSMUSG00000021134	Srsf5	96	88.636	Mus_musculus
ENSMMOG00000000137	srsf5b	93	61.538	MGP_PahariEiJ_G0029659	Srsf5	67	81.622	Mus_pahari
ENSMMOG00000000137	srsf5b	93	61.538	ENSMPUG00000007458	SRSF5	66	81.622	Mustela_putorius_furo
ENSMMOG00000000137	srsf5b	93	61.538	ENSNGAG00000010073	-	66	81.622	Nannospalax_galili
ENSMMOG00000000137	srsf5b	80	94.697	ENSNBRG00000001285	srsf5b	99	75.085	Neolamprologus_brichardi
ENSMMOG00000000137	srsf5b	97	61.481	ENSNLEG00000001615	SRSF5	94	69.853	Nomascus_leucogenys
ENSMMOG00000000137	srsf5b	93	61.538	ENSOPRG00000008286	SRSF5	95	68.498	Ochotona_princeps
ENSMMOG00000000137	srsf5b	93	61.538	ENSODEG00000000700	-	68	80.000	Octodon_degus
ENSMMOG00000000137	srsf5b	93	61.538	ENSODEG00000013469	-	67	81.622	Octodon_degus
ENSMMOG00000000137	srsf5b	80	96.154	ENSONIG00000005759	srsf5b	63	96.216	Oreochromis_niloticus
ENSMMOG00000000137	srsf5b	93	55.385	ENSOANG00000013336	SRSF5	62	82.456	Ornithorhynchus_anatinus
ENSMMOG00000000137	srsf5b	93	61.538	ENSOCUG00000009274	SRSF5	95	69.663	Oryctolagus_cuniculus
ENSMMOG00000000137	srsf5b	79	86.260	ENSORLG00000029854	srsf5b	58	89.894	Oryzias_latipes
ENSMMOG00000000137	srsf5b	93	61.538	ENSOGAG00000015122	SRSF5	66	81.622	Otolemur_garnettii
ENSMMOG00000000137	srsf5b	97	61.481	ENSPPAG00000029921	SRSF5	94	69.853	Pan_paniscus
ENSMMOG00000000137	srsf5b	97	60.741	ENSPPRG00000012903	SRSF5	94	69.853	Panthera_pardus
ENSMMOG00000000137	srsf5b	97	60.741	ENSPTIG00000018589	SRSF5	94	69.853	Panthera_tigris_altaica
ENSMMOG00000000137	srsf5b	97	61.481	ENSPTRG00000006488	SRSF5	94	69.853	Pan_troglodytes
ENSMMOG00000000137	srsf5b	97	61.481	ENSPANG00000021091	SRSF5	94	69.853	Papio_anubis
ENSMMOG00000000137	srsf5b	93	61.538	ENSPSIG00000012522	SRSF5	68	82.162	Pelodiscus_sinensis
ENSMMOG00000000137	srsf5b	96	79.851	ENSPMGG00000021646	srsf5b	93	95.455	Periophthalmus_magnuspinnatus
ENSMMOG00000000137	srsf5b	93	61.538	ENSPEMG00000020173	Srsf5	67	81.622	Peromyscus_maniculatus_bairdii
ENSMMOG00000000137	srsf5b	91	50.000	ENSPMAG00000007790	srsf5b	67	62.176	Petromyzon_marinus
ENSMMOG00000000137	srsf5b	93	61.538	ENSPCIG00000011877	SRSF5	67	82.162	Phascolarctos_cinereus
ENSMMOG00000000137	srsf5b	95	81.818	ENSPMEG00000012751	srsf5b	99	83.660	Poecilia_mexicana
ENSMMOG00000000137	srsf5b	93	61.538	ENSPPYG00000005945	SRSF5	66	81.622	Pongo_abelii
ENSMMOG00000000137	srsf5b	93	60.769	ENSPCAG00000004405	SRSF5	100	76.316	Procavia_capensis
ENSMMOG00000000137	srsf5b	97	60.741	ENSPCOG00000014442	SRSF5	94	69.853	Propithecus_coquereli
ENSMMOG00000000137	srsf5b	95	83.333	ENSPNYG00000002669	srsf5b	96	96.947	Pundamilia_nyererei
ENSMMOG00000000137	srsf5b	91	79.739	ENSPNAG00000011262	srsf5b	99	76.471	Pygocentrus_nattereri
ENSMMOG00000000137	srsf5b	93	61.538	ENSRNOG00000005513	Srsf5	67	81.622	Rattus_norvegicus
ENSMMOG00000000137	srsf5b	97	61.481	ENSRBIG00000013003	SRSF5	94	69.853	Rhinopithecus_bieti
ENSMMOG00000000137	srsf5b	97	61.481	ENSRROG00000043407	SRSF5	94	69.853	Rhinopithecus_roxellana
ENSMMOG00000000137	srsf5b	97	61.481	ENSSBOG00000030784	SRSF5	94	69.853	Saimiri_boliviensis_boliviensis
ENSMMOG00000000137	srsf5b	93	61.538	ENSSHAG00000002871	SRSF5	67	82.162	Sarcophilus_harrisii
ENSMMOG00000000137	srsf5b	93	72.727	ENSSMAG00000019728	srsf5b	61	90.404	Scophthalmus_maximus
ENSMMOG00000000137	srsf5b	80	95.385	ENSSDUG00000005766	srsf5b	65	96.757	Seriola_dumerili
ENSMMOG00000000137	srsf5b	97	80.741	ENSSLDG00000023255	srsf5b	95	88.194	Seriola_lalandi_dorsalis
ENSMMOG00000000137	srsf5b	65	69.189	ENSSARG00000001059	SRSF5	66	66.486	Sorex_araneus
ENSMMOG00000000137	srsf5b	97	62.857	ENSSPUG00000002464	SRSF5	95	71.631	Sphenodon_punctatus
ENSMMOG00000000137	srsf5b	93	61.538	ENSSSCG00000032583	SRSF5	96	68.148	Sus_scrofa
ENSMMOG00000000137	srsf5b	93	63.846	ENSTGUG00000011425	SRSF5	67	80.000	Taeniopygia_guttata
ENSMMOG00000000137	srsf5b	80	93.846	ENSTRUG00000017811	srsf5b	59	95.676	Takifugu_rubripes
ENSMMOG00000000137	srsf5b	79	90.625	ENSTNIG00000016411	srsf5b	66	94.595	Tetraodon_nigroviridis
ENSMMOG00000000137	srsf5b	93	62.308	ENSTBEG00000001972	SRSF5	65	76.757	Tupaia_belangeri
ENSMMOG00000000137	srsf5b	93	61.240	ENSTTRG00000003318	SRSF5	95	68.914	Tursiops_truncatus
ENSMMOG00000000137	srsf5b	93	61.538	ENSUAMG00000014184	SRSF5	66	81.622	Ursus_americanus
ENSMMOG00000000137	srsf5b	93	61.538	ENSUMAG00000009827	SRSF5	66	81.622	Ursus_maritimus
ENSMMOG00000000137	srsf5b	93	61.538	ENSVPAG00000006448	SRSF5	66	81.622	Vicugna_pacos
ENSMMOG00000000137	srsf5b	93	61.538	ENSVVUG00000003790	SRSF5	66	81.622	Vulpes_vulpes
ENSMMOG00000000137	srsf5b	93	64.122	ENSXETG00000002211	srsf5	67	83.871	Xenopus_tropicalis
ENSMMOG00000000137	srsf5b	80	95.420	ENSXCOG00000001570	srsf5b	63	93.011	Xiphophorus_couchianus
ENSMMOG00000000137	srsf5b	95	80.451	ENSXMAG00000026416	srsf5b	85	96.154	Xiphophorus_maculatus