EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000000275 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 13208 bases
Position: chrKV751330.1:13812462-13825669
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000000413	ResIII	PF04851.15	2.6e-07	1	1
ENSMMOP00000000414	ResIII	PF04851.15	3.2e-07	1	1
ENSMMOP00000000411	ResIII	PF04851.15	8.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000000420	-	2316	-	ENSMMOP00000000414	771 (aa)	-	-
ENSMMOT00000000417	-	2115	-	ENSMMOP00000000411	704 (aa)	-	-
ENSMMOT00000000419	-	2433	-	ENSMMOP00000000413	810 (aa)	-	-
ENSMMOT00000000412	-	2520	-	ENSMMOP00000000406	839 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000000275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000000275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000000275	smarcad1a	69	31.285	ENSMMOG00000020762	ercc6l	76	42.857
ENSMMOG00000000275	smarcad1a	71	31.471	ENSMMOG00000007950	hells	65	31.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000000275	smarcad1a	92	64.382	ENSG00000163104	SMARCAD1	100	67.114	Homo_sapiens
ENSMMOG00000000275	smarcad1a	99	88.462	ENSAPOG00000011446	smarcad1a	70	88.462	Acanthochromis_polyacanthus
ENSMMOG00000000275	smarcad1a	92	64.829	ENSAMEG00000005844	SMARCAD1	77	58.742	Ailuropoda_melanoleuca
ENSMMOG00000000275	smarcad1a	94	85.985	ENSACIG00000018326	smarcad1a	95	90.093	Amphilophus_citrinellus
ENSMMOG00000000275	smarcad1a	99	88.920	ENSAOCG00000019762	smarcad1a	70	89.174	Amphiprion_ocellaris
ENSMMOG00000000275	smarcad1a	99	89.031	ENSAPEG00000003889	smarcad1a	73	86.395	Amphiprion_percula
ENSMMOG00000000275	smarcad1a	98	87.015	ENSATEG00000015608	smarcad1a	73	87.047	Anabas_testudineus
ENSMMOG00000000275	smarcad1a	97	59.202	ENSAPLG00000004630	SMARCAD1	81	60.103	Anas_platyrhynchos
ENSMMOG00000000275	smarcad1a	97	59.142	ENSACAG00000013554	SMARCAD1	76	59.269	Anolis_carolinensis
ENSMMOG00000000275	smarcad1a	92	64.232	ENSANAG00000020488	SMARCAD1	87	58.491	Aotus_nancymaae
ENSMMOG00000000275	smarcad1a	100	85.503	ENSACLG00000017063	smarcad1a	75	87.518	Astatotilapia_calliptera
ENSMMOG00000000275	smarcad1a	89	74.882	ENSAMXG00000019130	smarcad1b	86	65.380	Astyanax_mexicanus
ENSMMOG00000000275	smarcad1a	93	71.001	ENSAMXG00000015470	smarcad1a	99	69.078	Astyanax_mexicanus
ENSMMOG00000000275	smarcad1a	92	64.190	ENSBTAG00000017061	SMARCAD1	77	58.344	Bos_taurus
ENSMMOG00000000275	smarcad1a	89	41.085	WBGene00010845	M03C11.8	69	40.773	Caenorhabditis_elegans
ENSMMOG00000000275	smarcad1a	92	64.382	ENSCJAG00000006778	SMARCAD1	77	58.616	Callithrix_jacchus
ENSMMOG00000000275	smarcad1a	92	64.978	ENSCAFG00000010026	SMARCAD1	77	58.868	Canis_familiaris
ENSMMOG00000000275	smarcad1a	92	64.978	ENSCAFG00020003994	SMARCAD1	89	58.868	Canis_lupus_dingo
ENSMMOG00000000275	smarcad1a	92	64.531	ENSCHIG00000012905	SMARCAD1	77	58.616	Capra_hircus
ENSMMOG00000000275	smarcad1a	92	64.382	ENSTSYG00000002706	SMARCAD1	77	58.616	Carlito_syrichta
ENSMMOG00000000275	smarcad1a	94	53.209	ENSCAPG00000016744	SMARCAD1	83	53.947	Cavia_aperea
ENSMMOG00000000275	smarcad1a	92	64.435	ENSCPOG00000011398	SMARCAD1	77	58.868	Cavia_porcellus
ENSMMOG00000000275	smarcad1a	92	64.531	ENSCCAG00000022264	SMARCAD1	100	67.282	Cebus_capucinus
ENSMMOG00000000275	smarcad1a	92	64.382	ENSCATG00000035663	SMARCAD1	89	58.491	Cercocebus_atys
ENSMMOG00000000275	smarcad1a	92	64.382	ENSCSAG00000004186	SMARCAD1	94	58.491	Chlorocebus_sabaeus
ENSMMOG00000000275	smarcad1a	98	60.886	ENSCPBG00000013203	SMARCAD1	77	60.886	Chrysemys_picta_bellii
ENSMMOG00000000275	smarcad1a	92	50.673	ENSCING00000001688	-	98	51.735	Ciona_intestinalis
ENSMMOG00000000275	smarcad1a	92	64.382	ENSCANG00000003556	SMARCAD1	100	67.114	Colobus_angolensis_palliatus
ENSMMOG00000000275	smarcad1a	97	58.555	ENSCGRG00001015056	Smarcad1	76	58.555	Cricetulus_griseus_chok1gshd
ENSMMOG00000000275	smarcad1a	97	58.555	ENSCGRG00000014087	Smarcad1	76	58.555	Cricetulus_griseus_crigri
ENSMMOG00000000275	smarcad1a	99	81.642	ENSCSEG00000014419	-	74	82.603	Cynoglossus_semilaevis
ENSMMOG00000000275	smarcad1a	100	79.714	ENSCSEG00000017903	smarcad1a	70	82.955	Cynoglossus_semilaevis
ENSMMOG00000000275	smarcad1a	89	75.625	ENSDARG00000073721	smarcad1b	75	70.474	Danio_rerio
ENSMMOG00000000275	smarcad1a	97	74.843	ENSDARG00000014041	smarcad1a	77	72.768	Danio_rerio
ENSMMOG00000000275	smarcad1a	92	64.978	ENSDNOG00000000806	-	77	58.616	Dasypus_novemcinctus
ENSMMOG00000000275	smarcad1a	97	58.481	ENSDORG00000012331	Smarcad1	76	58.481	Dipodomys_ordii
ENSMMOG00000000275	smarcad1a	89	44.684	FBgn0032157	Etl1	82	44.318	Drosophila_melanogaster
ENSMMOG00000000275	smarcad1a	89	46.522	ENSEBUG00000003969	smarcad1a	99	46.698	Eptatretus_burgeri
ENSMMOG00000000275	smarcad1a	92	64.829	ENSEASG00005012382	SMARCAD1	82	58.625	Equus_asinus_asinus
ENSMMOG00000000275	smarcad1a	92	64.829	ENSECAG00000011562	SMARCAD1	77	58.742	Equus_caballus
ENSMMOG00000000275	smarcad1a	89	73.113	ENSELUG00000019154	smarcad1b	80	64.557	Esox_lucius
ENSMMOG00000000275	smarcad1a	99	78.815	ENSELUG00000018535	smarcad1a	71	78.815	Esox_lucius
ENSMMOG00000000275	smarcad1a	92	64.978	ENSFCAG00000003958	SMARCAD1	100	67.785	Felis_catus
ENSMMOG00000000275	smarcad1a	99	59.748	ENSFALG00000006089	SMARCAD1	78	59.748	Ficedula_albicollis
ENSMMOG00000000275	smarcad1a	99	64.837	ENSFDAG00000017027	SMARCAD1	77	58.868	Fukomys_damarensis
ENSMMOG00000000275	smarcad1a	99	81.016	ENSFHEG00000012778	smarcad1a	69	80.512	Fundulus_heteroclitus
ENSMMOG00000000275	smarcad1a	100	80.889	ENSGMOG00000018995	smarcad1a	90	76.093	Gadus_morhua
ENSMMOG00000000275	smarcad1a	95	61.863	ENSGALG00000037339	SMARCAD1	94	57.928	Gallus_gallus
ENSMMOG00000000275	smarcad1a	95	84.395	ENSGAFG00000013498	smarcad1a	66	84.395	Gambusia_affinis
ENSMMOG00000000275	smarcad1a	100	86.212	ENSGACG00000007327	smarcad1a	84	85.863	Gasterosteus_aculeatus
ENSMMOG00000000275	smarcad1a	98	59.402	ENSGAGG00000008582	SMARCAD1	77	59.348	Gopherus_agassizii
ENSMMOG00000000275	smarcad1a	92	64.382	ENSGGOG00000023001	SMARCAD1	77	58.491	Gorilla_gorilla
ENSMMOG00000000275	smarcad1a	100	85.355	ENSHBUG00000011042	smarcad1a	73	87.372	Haplochromis_burtoni
ENSMMOG00000000275	smarcad1a	93	64.837	ENSHGLG00000005070	SMARCAD1	77	58.868	Heterocephalus_glaber_female
ENSMMOG00000000275	smarcad1a	93	64.837	ENSHGLG00100006812	SMARCAD1	77	58.868	Heterocephalus_glaber_male
ENSMMOG00000000275	smarcad1a	89	79.563	ENSHCOG00000007848	smarcad1a	64	78.378	Hippocampus_comes
ENSMMOG00000000275	smarcad1a	99	67.872	ENSIPUG00000000242	smarcad1a	76	71.006	Ictalurus_punctatus
ENSMMOG00000000275	smarcad1a	91	73.620	ENSIPUG00000022817	smarcad1b	85	65.239	Ictalurus_punctatus
ENSMMOG00000000275	smarcad1a	92	64.232	ENSSTOG00000001227	SMARCAD1	77	58.291	Ictidomys_tridecemlineatus
ENSMMOG00000000275	smarcad1a	97	58.354	ENSJJAG00000022342	Smarcad1	77	57.980	Jaculus_jaculus
ENSMMOG00000000275	smarcad1a	97	84.663	ENSKMAG00000021351	smarcad1a	72	81.122	Kryptolebias_marmoratus
ENSMMOG00000000275	smarcad1a	100	83.163	ENSLBEG00000008088	smarcad1a	72	83.163	Labrus_bergylta
ENSMMOG00000000275	smarcad1a	98	73.130	ENSLOCG00000012909	smarcad1a	75	72.006	Lepisosteus_oculatus
ENSMMOG00000000275	smarcad1a	92	63.284	ENSLAFG00000000040	SMARCAD1	77	57.481	Loxodonta_africana
ENSMMOG00000000275	smarcad1a	92	64.382	ENSMFAG00000042606	SMARCAD1	89	58.491	Macaca_fascicularis
ENSMMOG00000000275	smarcad1a	92	64.382	ENSMMUG00000022242	SMARCAD1	89	58.491	Macaca_mulatta
ENSMMOG00000000275	smarcad1a	92	64.382	ENSMNEG00000038117	SMARCAD1	100	67.114	Macaca_nemestrina
ENSMMOG00000000275	smarcad1a	92	64.382	ENSMLEG00000038333	SMARCAD1	100	67.114	Mandrillus_leucophaeus
ENSMMOG00000000275	smarcad1a	100	86.982	ENSMAMG00000000933	smarcad1a	71	86.982	Mastacembelus_armatus
ENSMMOG00000000275	smarcad1a	100	85.355	ENSMZEG00005005203	smarcad1a	75	87.372	Maylandia_zebra
ENSMMOG00000000275	smarcad1a	98	55.901	ENSMGAG00000005577	SMARCAD1	82	55.901	Meleagris_gallopavo
ENSMMOG00000000275	smarcad1a	97	58.831	ENSMAUG00000008417	Smarcad1	76	58.935	Mesocricetus_auratus
ENSMMOG00000000275	smarcad1a	97	58.333	ENSMICG00000009746	SMARCAD1	76	58.333	Microcebus_murinus
ENSMMOG00000000275	smarcad1a	97	58.555	ENSMOCG00000017142	Smarcad1	77	58.177	Microtus_ochrogaster
ENSMMOG00000000275	smarcad1a	98	58.958	ENSMODG00000019268	SMARCAD1	77	58.958	Monodelphis_domestica
ENSMMOG00000000275	smarcad1a	98	58.052	MGP_CAROLIEiJ_G0028458	-	63	58.052	Mus_caroli
ENSMMOG00000000275	smarcad1a	98	58.052	ENSMUSG00000029920	Smarcad1	77	58.052	Mus_musculus
ENSMMOG00000000275	smarcad1a	97	58.428	MGP_PahariEiJ_G0022198	Smarcad1	76	58.428	Mus_pahari
ENSMMOG00000000275	smarcad1a	98	58.052	MGP_SPRETEiJ_G0029462	Smarcad1	77	58.052	Mus_spretus
ENSMMOG00000000275	smarcad1a	92	64.829	ENSMPUG00000002111	SMARCAD1	77	58.742	Mustela_putorius_furo
ENSMMOG00000000275	smarcad1a	94	63.650	ENSMLUG00000000425	SMARCAD1	77	58.240	Myotis_lucifugus
ENSMMOG00000000275	smarcad1a	92	64.435	ENSNGAG00000000810	Smarcad1	78	58.786	Nannospalax_galili
ENSMMOG00000000275	smarcad1a	91	85.823	ENSNBRG00000012749	smarcad1a	82	87.609	Neolamprologus_brichardi
ENSMMOG00000000275	smarcad1a	92	64.382	ENSNLEG00000014225	SMARCAD1	100	67.114	Nomascus_leucogenys
ENSMMOG00000000275	smarcad1a	97	59.463	ENSODEG00000004334	SMARCAD1	77	59.068	Octodon_degus
ENSMMOG00000000275	smarcad1a	97	86.427	ENSONIG00000015059	smarcad1a	76	83.929	Oreochromis_niloticus
ENSMMOG00000000275	smarcad1a	98	59.899	ENSOANG00000013764	SMARCAD1	96	60.530	Ornithorhynchus_anatinus
ENSMMOG00000000275	smarcad1a	94	63.104	ENSOCUG00000017283	SMARCAD1	77	58.491	Oryctolagus_cuniculus
ENSMMOG00000000275	smarcad1a	99	82.523	ENSORLG00000004869	smarcad1a	69	82.090	Oryzias_latipes
ENSMMOG00000000275	smarcad1a	99	82.523	ENSORLG00020020569	smarcad1a	69	82.090	Oryzias_latipes_hni
ENSMMOG00000000275	smarcad1a	99	82.523	ENSORLG00015009045	smarcad1a	70	82.665	Oryzias_latipes_hsok
ENSMMOG00000000275	smarcad1a	99	82.470	ENSOMEG00000023032	smarcad1a	70	81.940	Oryzias_melastigma
ENSMMOG00000000275	smarcad1a	97	58.081	ENSOGAG00000011444	SMARCAD1	77	57.711	Otolemur_garnettii
ENSMMOG00000000275	smarcad1a	92	64.531	ENSOARG00000017851	SMARCAD1	77	58.616	Ovis_aries
ENSMMOG00000000275	smarcad1a	92	64.382	ENSPPAG00000035715	SMARCAD1	77	58.491	Pan_paniscus
ENSMMOG00000000275	smarcad1a	92	64.978	ENSPPRG00000024756	SMARCAD1	100	67.785	Panthera_pardus
ENSMMOG00000000275	smarcad1a	92	64.785	ENSPTIG00000017868	SMARCAD1	77	58.720	Panthera_tigris_altaica
ENSMMOG00000000275	smarcad1a	92	64.382	ENSPTRG00000023126	SMARCAD1	100	67.114	Pan_troglodytes
ENSMMOG00000000275	smarcad1a	92	62.760	ENSPANG00000019757	SMARCAD1	76	57.634	Papio_anubis
ENSMMOG00000000275	smarcad1a	93	65.294	ENSPSIG00000010255	SMARCAD1	77	59.774	Pelodiscus_sinensis
ENSMMOG00000000275	smarcad1a	95	72.817	ENSPMGG00000010735	smarcad1a	100	74.894	Periophthalmus_magnuspinnatus
ENSMMOG00000000275	smarcad1a	99	52.185	ENSPEMG00000001854	Smarcad1	76	52.185	Peromyscus_maniculatus_bairdii
ENSMMOG00000000275	smarcad1a	93	55.669	ENSPMAG00000003516	smarcad1a	78	52.163	Petromyzon_marinus
ENSMMOG00000000275	smarcad1a	92	65.723	ENSPCIG00000008137	SMARCAD1	92	63.558	Phascolarctos_cinereus
ENSMMOG00000000275	smarcad1a	100	83.689	ENSPFOG00000019116	smarcad1a	71	79.716	Poecilia_formosa
ENSMMOG00000000275	smarcad1a	99	83.537	ENSPLAG00000000108	smarcad1a	71	79.574	Poecilia_latipinna
ENSMMOG00000000275	smarcad1a	100	83.689	ENSPMEG00000009155	smarcad1a	71	79.716	Poecilia_mexicana
ENSMMOG00000000275	smarcad1a	99	83.308	ENSPREG00000018185	smarcad1a	80	83.994	Poecilia_reticulata
ENSMMOG00000000275	smarcad1a	92	63.690	ENSPPYG00000014935	SMARCAD1	77	58.093	Pongo_abelii
ENSMMOG00000000275	smarcad1a	76	61.664	ENSPCOG00000020478	SMARCAD1	70	59.030	Propithecus_coquereli
ENSMMOG00000000275	smarcad1a	92	64.030	ENSPVAG00000001760	SMARCAD1	77	58.186	Pteropus_vampyrus
ENSMMOG00000000275	smarcad1a	91	85.868	ENSPNYG00000010087	smarcad1a	82	86.735	Pundamilia_nyererei
ENSMMOG00000000275	smarcad1a	93	71.982	ENSPNAG00000010099	smarcad1b	85	64.838	Pygocentrus_nattereri
ENSMMOG00000000275	smarcad1a	100	72.485	ENSPNAG00000001663	smarcad1a	83	64.320	Pygocentrus_nattereri
ENSMMOG00000000275	smarcad1a	98	58.052	ENSRNOG00000006391	Smarcad1	77	58.052	Rattus_norvegicus
ENSMMOG00000000275	smarcad1a	92	64.382	ENSRBIG00000041989	SMARCAD1	77	58.491	Rhinopithecus_bieti
ENSMMOG00000000275	smarcad1a	92	64.382	ENSRROG00000035309	SMARCAD1	77	58.491	Rhinopithecus_roxellana
ENSMMOG00000000275	smarcad1a	92	64.531	ENSSBOG00000032114	SMARCAD1	100	67.282	Saimiri_boliviensis_boliviensis
ENSMMOG00000000275	smarcad1a	98	66.771	ENSSHAG00000001279	SMARCAD1	77	59.212	Sarcophilus_harrisii
ENSMMOG00000000275	smarcad1a	93	72.593	ENSSFOG00015020909	smarcad1a	91	72.543	Scleropages_formosus
ENSMMOG00000000275	smarcad1a	99	72.439	ENSSFOG00015016814	smarcad1b	75	72.439	Scleropages_formosus
ENSMMOG00000000275	smarcad1a	99	85.819	ENSSMAG00000001326	smarcad1a	68	89.062	Scophthalmus_maximus
ENSMMOG00000000275	smarcad1a	94	85.820	ENSSDUG00000022338	smarcad1a	84	88.210	Seriola_dumerili
ENSMMOG00000000275	smarcad1a	100	84.786	ENSSLDG00000024986	smarcad1a	77	86.804	Seriola_lalandi_dorsalis
ENSMMOG00000000275	smarcad1a	83	67.899	ENSSPUG00000004633	SMARCAD1	99	68.739	Sphenodon_punctatus
ENSMMOG00000000275	smarcad1a	99	87.278	ENSSPAG00000001970	smarcad1a	69	87.278	Stegastes_partitus
ENSMMOG00000000275	smarcad1a	92	64.829	ENSSSCG00000009193	SMARCAD1	94	58.868	Sus_scrofa
ENSMMOG00000000275	smarcad1a	97	59.176	ENSTGUG00000003127	SMARCAD1	100	60.077	Taeniopygia_guttata
ENSMMOG00000000275	smarcad1a	100	86.418	ENSTNIG00000017585	smarcad1a	90	80.774	Tetraodon_nigroviridis
ENSMMOG00000000275	smarcad1a	85	69.841	ENSTBEG00000002789	SMARCAD1	68	69.841	Tupaia_belangeri
ENSMMOG00000000275	smarcad1a	92	64.435	ENSTTRG00000000226	SMARCAD1	79	58.543	Tursiops_truncatus
ENSMMOG00000000275	smarcad1a	92	64.829	ENSUAMG00000022262	SMARCAD1	73	63.196	Ursus_americanus
ENSMMOG00000000275	smarcad1a	92	64.829	ENSUMAG00000004549	SMARCAD1	77	58.742	Ursus_maritimus
ENSMMOG00000000275	smarcad1a	92	64.829	ENSVVUG00000007271	SMARCAD1	94	58.742	Vulpes_vulpes
ENSMMOG00000000275	smarcad1a	93	59.704	ENSXETG00000019214	smarcad1	78	59.914	Xenopus_tropicalis
ENSMMOG00000000275	smarcad1a	98	77.635	ENSXCOG00000005232	smarcad1a	86	83.158	Xiphophorus_couchianus
ENSMMOG00000000275	smarcad1a	99	79.741	ENSXMAG00000015350	smarcad1a	70	81.579	Xiphophorus_maculatus