EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000000475 (Gene tree)
Gene ID: -
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b%2C subunit 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 10940 bases
Position: chrKV751348.1:1604385-1615324
Accession: ZDB-GENE-040827-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000000564	SF3b1	PF08920.10	7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000000573	-	3282	-	ENSMMOP00000000564	1093 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000000475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000000475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000000475	sf3b1	100	93.059	ENSG00000115524	SF3B1	97	82.979	Homo_sapiens
ENSMMOG00000000475	sf3b1	100	98.364	ENSAPOG00000011894	sf3b1	88	98.364	Acanthochromis_polyacanthus
ENSMMOG00000000475	sf3b1	99	93.008	ENSAMEG00000013809	SF3B1	83	93.008	Ailuropoda_melanoleuca
ENSMMOG00000000475	sf3b1	100	97.626	ENSACIG00000020910	sf3b1	81	97.626	Amphilophus_citrinellus
ENSMMOG00000000475	sf3b1	100	98.364	ENSAOCG00000004478	sf3b1	84	98.364	Amphiprion_ocellaris
ENSMMOG00000000475	sf3b1	100	98.364	ENSAPEG00000012937	sf3b1	84	98.364	Amphiprion_percula
ENSMMOG00000000475	sf3b1	100	98.635	ENSATEG00000020435	sf3b1	84	98.635	Anabas_testudineus
ENSMMOG00000000475	sf3b1	99	93.358	ENSAPLG00000003993	SF3B1	83	93.358	Anas_platyrhynchos
ENSMMOG00000000475	sf3b1	100	93.053	ENSACAG00000009612	SF3B1	83	93.053	Anolis_carolinensis
ENSMMOG00000000475	sf3b1	100	93.059	ENSANAG00000021577	SF3B1	84	93.059	Aotus_nancymaae
ENSMMOG00000000475	sf3b1	100	96.997	ENSACLG00000023470	sf3b1	84	96.997	Astatotilapia_calliptera
ENSMMOG00000000475	sf3b1	100	96.458	ENSAMXG00000002219	sf3b1	84	96.458	Astyanax_mexicanus
ENSMMOG00000000475	sf3b1	100	93.059	ENSBTAG00000008915	SF3B1	84	93.059	Bos_taurus
ENSMMOG00000000475	sf3b1	97	64.266	WBGene00011605	sftb-1	81	64.446	Caenorhabditis_elegans
ENSMMOG00000000475	sf3b1	100	93.059	ENSCJAG00000003902	SF3B1	84	93.059	Callithrix_jacchus
ENSMMOG00000000475	sf3b1	100	93.059	ENSCAFG00000010826	SF3B1	84	93.059	Canis_familiaris
ENSMMOG00000000475	sf3b1	100	93.059	ENSCAFG00020004750	SF3B1	84	93.059	Canis_lupus_dingo
ENSMMOG00000000475	sf3b1	100	93.059	ENSCHIG00000015226	SF3B1	84	93.059	Capra_hircus
ENSMMOG00000000475	sf3b1	100	92.968	ENSTSYG00000009214	SF3B1	84	92.968	Carlito_syrichta
ENSMMOG00000000475	sf3b1	99	92.942	ENSCAPG00000006547	SF3B1	83	92.942	Cavia_aperea
ENSMMOG00000000475	sf3b1	99	93.088	ENSCPOG00000009353	SF3B1	83	93.088	Cavia_porcellus
ENSMMOG00000000475	sf3b1	100	93.059	ENSCCAG00000020506	SF3B1	84	93.059	Cebus_capucinus
ENSMMOG00000000475	sf3b1	100	93.059	ENSCATG00000035735	SF3B1	84	93.059	Cercocebus_atys
ENSMMOG00000000475	sf3b1	100	92.420	ENSCLAG00000014767	SF3B1	84	92.420	Chinchilla_lanigera
ENSMMOG00000000475	sf3b1	100	93.059	ENSCSAG00000011505	SF3B1	84	93.059	Chlorocebus_sabaeus
ENSMMOG00000000475	sf3b1	78	91.741	ENSCHOG00000009860	SF3B1	65	91.741	Choloepus_hoffmanni
ENSMMOG00000000475	sf3b1	100	93.321	ENSCPBG00000021902	SF3B1	97	93.321	Chrysemys_picta_bellii
ENSMMOG00000000475	sf3b1	82	78.266	ENSCING00000002558	-	99	78.842	Ciona_intestinalis
ENSMMOG00000000475	sf3b1	99	79.620	ENSCSAVG00000002559	-	83	79.620	Ciona_savignyi
ENSMMOG00000000475	sf3b1	100	93.059	ENSCANG00000029415	SF3B1	84	93.059	Colobus_angolensis_palliatus
ENSMMOG00000000475	sf3b1	100	93.059	ENSCGRG00001016990	Sf3b1	84	93.059	Cricetulus_griseus_chok1gshd
ENSMMOG00000000475	sf3b1	100	93.059	ENSCGRG00000005301	Sf3b1	84	93.059	Cricetulus_griseus_crigri
ENSMMOG00000000475	sf3b1	100	93.151	ENSCSEG00000003860	sf3b1	83	93.151	Cynoglossus_semilaevis
ENSMMOG00000000475	sf3b1	100	97.455	ENSCVAG00000003680	sf3b1	87	97.455	Cyprinodon_variegatus
ENSMMOG00000000475	sf3b1	100	95.091	ENSDARG00000056138	sf3b1	84	95.091	Danio_rerio
ENSMMOG00000000475	sf3b1	100	92.974	ENSDNOG00000011754	SF3B1	84	92.974	Dasypus_novemcinctus
ENSMMOG00000000475	sf3b1	99	90.691	ENSDORG00000002399	Sf3b1	83	90.599	Dipodomys_ordii
ENSMMOG00000000475	sf3b1	100	74.607	FBgn0031266	Sf3b1	84	74.607	Drosophila_melanogaster
ENSMMOG00000000475	sf3b1	99	92.528	ENSETEG00000009188	SF3B1	100	92.528	Echinops_telfairi
ENSMMOG00000000475	sf3b1	99	85.505	ENSEBUG00000004325	sf3b1	81	88.830	Eptatretus_burgeri
ENSMMOG00000000475	sf3b1	100	93.059	ENSEASG00005020159	SF3B1	81	93.059	Equus_asinus_asinus
ENSMMOG00000000475	sf3b1	100	93.059	ENSECAG00000021657	SF3B1	81	93.059	Equus_caballus
ENSMMOG00000000475	sf3b1	91	100.000	ENSEEUG00000000836	SF3B1	70	100.000	Erinaceus_europaeus
ENSMMOG00000000475	sf3b1	100	95.672	ENSELUG00000005977	sf3b1	82	95.672	Esox_lucius
ENSMMOG00000000475	sf3b1	100	93.059	ENSFCAG00000005038	SF3B1	84	93.059	Felis_catus
ENSMMOG00000000475	sf3b1	99	93.358	ENSFALG00000004281	SF3B1	83	93.358	Ficedula_albicollis
ENSMMOG00000000475	sf3b1	100	93.059	ENSFDAG00000017510	SF3B1	84	93.059	Fukomys_damarensis
ENSMMOG00000000475	sf3b1	100	96.455	ENSFHEG00000014333	sf3b1	84	96.455	Fundulus_heteroclitus
ENSMMOG00000000475	sf3b1	100	96.539	ENSGMOG00000006773	sf3b1	84	96.539	Gadus_morhua
ENSMMOG00000000475	sf3b1	100	93.321	ENSGALG00000008038	SF3B1	83	93.321	Gallus_gallus
ENSMMOG00000000475	sf3b1	100	96.252	ENSGAFG00000000704	sf3b1	83	97.870	Gambusia_affinis
ENSMMOG00000000475	sf3b1	100	97.448	ENSGACG00000008839	sf3b1	84	97.448	Gasterosteus_aculeatus
ENSMMOG00000000475	sf3b1	100	92.559	ENSGAGG00000017478	SF3B1	84	92.559	Gopherus_agassizii
ENSMMOG00000000475	sf3b1	99	87.281	ENSGGOG00000009264	SF3B1	83	87.465	Gorilla_gorilla
ENSMMOG00000000475	sf3b1	100	96.997	ENSHBUG00000007705	sf3b1	84	96.997	Haplochromis_burtoni
ENSMMOG00000000475	sf3b1	99	93.094	ENSHGLG00000008285	-	83	93.094	Heterocephalus_glaber_female
ENSMMOG00000000475	sf3b1	99	92.818	ENSHGLG00100005535	-	84	92.818	Heterocephalus_glaber_male
ENSMMOG00000000475	sf3b1	100	96.296	ENSHCOG00000016775	sf3b1	84	96.296	Hippocampus_comes
ENSMMOG00000000475	sf3b1	100	96.091	ENSIPUG00000013171	sf3b1	84	96.091	Ictalurus_punctatus
ENSMMOG00000000475	sf3b1	100	93.059	ENSSTOG00000011034	SF3B1	84	93.059	Ictidomys_tridecemlineatus
ENSMMOG00000000475	sf3b1	99	93.062	ENSJJAG00000010903	Sf3b1	83	93.062	Jaculus_jaculus
ENSMMOG00000000475	sf3b1	100	96.827	ENSKMAG00000004009	sf3b1	84	96.827	Kryptolebias_marmoratus
ENSMMOG00000000475	sf3b1	100	97.804	ENSLBEG00000022208	sf3b1	84	97.804	Labrus_bergylta
ENSMMOG00000000475	sf3b1	99	89.671	ENSLACG00000014832	SF3B1	83	89.762	Latimeria_chalumnae
ENSMMOG00000000475	sf3b1	100	95.281	ENSLOCG00000003899	sf3b1	84	95.281	Lepisosteus_oculatus
ENSMMOG00000000475	sf3b1	100	93.059	ENSLAFG00000001956	SF3B1	84	93.059	Loxodonta_africana
ENSMMOG00000000475	sf3b1	99	93.094	ENSMMUG00000022430	SF3B1	82	93.094	Macaca_mulatta
ENSMMOG00000000475	sf3b1	100	93.059	ENSMNEG00000042333	SF3B1	84	93.059	Macaca_nemestrina
ENSMMOG00000000475	sf3b1	93	87.843	ENSMLEG00000026141	SF3B1	80	88.420	Mandrillus_leucophaeus
ENSMMOG00000000475	sf3b1	100	98.362	ENSMAMG00000010241	sf3b1	84	98.362	Mastacembelus_armatus
ENSMMOG00000000475	sf3b1	100	96.997	ENSMZEG00005021254	sf3b1	84	96.997	Maylandia_zebra
ENSMMOG00000000475	sf3b1	99	92.620	ENSMGAG00000007017	SF3B1	83	92.620	Meleagris_gallopavo
ENSMMOG00000000475	sf3b1	99	88.029	ENSMAUG00000009071	Sf3b1	82	88.029	Mesocricetus_auratus
ENSMMOG00000000475	sf3b1	100	93.059	ENSMICG00000013879	SF3B1	84	93.059	Microcebus_murinus
ENSMMOG00000000475	sf3b1	99	87.948	ENSMOCG00000000455	Sf3b1	83	87.948	Microtus_ochrogaster
ENSMMOG00000000475	sf3b1	100	92.420	ENSMODG00000012275	SF3B1	83	92.420	Monodelphis_domestica
ENSMMOG00000000475	sf3b1	100	98.180	ENSMALG00000017211	sf3b1	84	98.180	Monopterus_albus
ENSMMOG00000000475	sf3b1	100	93.059	MGP_CAROLIEiJ_G0014141	Sf3b1	84	93.059	Mus_caroli
ENSMMOG00000000475	sf3b1	100	93.059	ENSMUSG00000025982	Sf3b1	84	93.059	Mus_musculus
ENSMMOG00000000475	sf3b1	100	93.059	MGP_SPRETEiJ_G0014947	Sf3b1	84	93.059	Mus_spretus
ENSMMOG00000000475	sf3b1	100	93.059	ENSMPUG00000007799	SF3B1	84	93.059	Mustela_putorius_furo
ENSMMOG00000000475	sf3b1	100	91.689	ENSMLUG00000000840	SF3B1	84	91.689	Myotis_lucifugus
ENSMMOG00000000475	sf3b1	99	92.759	ENSNGAG00000021884	-	83	92.759	Nannospalax_galili
ENSMMOG00000000475	sf3b1	100	91.606	ENSNBRG00000015816	sf3b1	83	91.606	Neolamprologus_brichardi
ENSMMOG00000000475	sf3b1	100	93.059	ENSNLEG00000006861	SF3B1	84	93.059	Nomascus_leucogenys
ENSMMOG00000000475	sf3b1	68	100.000	ENSMEUG00000015848	-	53	100.000	Notamacropus_eugenii
ENSMMOG00000000475	sf3b1	98	80.091	ENSOPRG00000008596	SF3B1	82	80.091	Ochotona_princeps
ENSMMOG00000000475	sf3b1	100	93.059	ENSODEG00000011153	-	84	93.059	Octodon_degus
ENSMMOG00000000475	sf3b1	100	96.997	ENSONIG00000013758	sf3b1	84	96.997	Oreochromis_niloticus
ENSMMOG00000000475	sf3b1	79	95.627	ENSOCUG00000012722	-	77	95.627	Oryctolagus_cuniculus
ENSMMOG00000000475	sf3b1	100	96.906	ENSORLG00000020219	sf3b1	84	96.906	Oryzias_latipes
ENSMMOG00000000475	sf3b1	100	96.906	ENSORLG00020001746	sf3b1	84	96.906	Oryzias_latipes_hni
ENSMMOG00000000475	sf3b1	77	96.181	ENSORLG00015001759	sf3b1	98	96.181	Oryzias_latipes_hsok
ENSMMOG00000000475	sf3b1	100	97.091	ENSOMEG00000019231	sf3b1	84	97.091	Oryzias_melastigma
ENSMMOG00000000475	sf3b1	58	73.125	ENSOGAG00000000267	-	100	73.125	Otolemur_garnettii
ENSMMOG00000000475	sf3b1	100	93.059	ENSOARG00000015374	SF3B1	84	93.059	Ovis_aries
ENSMMOG00000000475	sf3b1	100	93.059	ENSPPAG00000035007	SF3B1	84	93.059	Pan_paniscus
ENSMMOG00000000475	sf3b1	100	93.059	ENSPPRG00000009090	SF3B1	84	93.059	Panthera_pardus
ENSMMOG00000000475	sf3b1	100	93.059	ENSPTIG00000021557	SF3B1	84	93.059	Panthera_tigris_altaica
ENSMMOG00000000475	sf3b1	99	84.573	ENSPTRG00000012771	SF3B1	83	84.573	Pan_troglodytes
ENSMMOG00000000475	sf3b1	100	93.059	ENSPANG00000013417	SF3B1	84	93.059	Papio_anubis
ENSMMOG00000000475	sf3b1	100	95.993	ENSPKIG00000000784	sf3b1	84	95.993	Paramormyrops_kingsleyae
ENSMMOG00000000475	sf3b1	99	92.151	ENSPSIG00000017222	SF3B1	82	92.151	Pelodiscus_sinensis
ENSMMOG00000000475	sf3b1	100	97.441	ENSPMGG00000004330	sf3b1	91	97.441	Periophthalmus_magnuspinnatus
ENSMMOG00000000475	sf3b1	99	93.094	ENSPEMG00000010699	Sf3b1	83	93.094	Peromyscus_maniculatus_bairdii
ENSMMOG00000000475	sf3b1	100	88.657	ENSPMAG00000001311	sf3b1	84	89.020	Petromyzon_marinus
ENSMMOG00000000475	sf3b1	100	92.420	ENSPCIG00000010642	SF3B1	83	92.420	Phascolarctos_cinereus
ENSMMOG00000000475	sf3b1	100	97.729	ENSPFOG00000000073	sf3b1	84	97.729	Poecilia_formosa
ENSMMOG00000000475	sf3b1	100	97.818	ENSPLAG00000002293	sf3b1	84	97.818	Poecilia_latipinna
ENSMMOG00000000475	sf3b1	100	97.818	ENSPMEG00000000446	sf3b1	82	97.818	Poecilia_mexicana
ENSMMOG00000000475	sf3b1	100	97.818	ENSPREG00000019652	sf3b1	84	97.818	Poecilia_reticulata
ENSMMOG00000000475	sf3b1	79	96.774	ENSPPYG00000013044	SF3B1	76	96.774	Pongo_abelii
ENSMMOG00000000475	sf3b1	100	93.059	ENSPCAG00000009292	SF3B1	84	93.059	Procavia_capensis
ENSMMOG00000000475	sf3b1	100	93.059	ENSPCOG00000024074	SF3B1	84	93.059	Propithecus_coquereli
ENSMMOG00000000475	sf3b1	100	93.059	ENSPVAG00000008302	SF3B1	84	93.059	Pteropus_vampyrus
ENSMMOG00000000475	sf3b1	100	96.997	ENSPNYG00000014939	sf3b1	84	96.997	Pundamilia_nyererei
ENSMMOG00000000475	sf3b1	100	96.458	ENSPNAG00000008288	sf3b1	84	96.458	Pygocentrus_nattereri
ENSMMOG00000000475	sf3b1	100	93.059	ENSRNOG00000013516	Sf3b1	84	93.059	Rattus_norvegicus
ENSMMOG00000000475	sf3b1	99	88.858	ENSRBIG00000026096	SF3B1	83	88.858	Rhinopithecus_bieti
ENSMMOG00000000475	sf3b1	100	93.059	ENSRROG00000031308	SF3B1	84	93.059	Rhinopithecus_roxellana
ENSMMOG00000000475	sf3b1	100	93.059	ENSSBOG00000020080	SF3B1	84	93.059	Saimiri_boliviensis_boliviensis
ENSMMOG00000000475	sf3b1	100	92.420	ENSSHAG00000017564	SF3B1	83	92.420	Sarcophilus_harrisii
ENSMMOG00000000475	sf3b1	100	96.182	ENSSFOG00015021535	sf3b1	84	96.182	Scleropages_formosus
ENSMMOG00000000475	sf3b1	100	97.197	ENSSMAG00000013977	sf3b1	83	97.197	Scophthalmus_maximus
ENSMMOG00000000475	sf3b1	100	98.544	ENSSDUG00000017422	sf3b1	84	98.544	Seriola_dumerili
ENSMMOG00000000475	sf3b1	100	98.453	ENSSLDG00000019495	sf3b1	84	98.453	Seriola_lalandi_dorsalis
ENSMMOG00000000475	sf3b1	70	100.000	ENSSARG00000007016	SF3B1	59	100.000	Sorex_araneus
ENSMMOG00000000475	sf3b1	100	93.047	ENSSPUG00000000410	SF3B1	83	93.047	Sphenodon_punctatus
ENSMMOG00000000475	sf3b1	100	98.362	ENSSPAG00000010451	sf3b1	83	98.362	Stegastes_partitus
ENSMMOG00000000475	sf3b1	100	93.059	ENSSSCG00000016075	SF3B1	99	93.059	Sus_scrofa
ENSMMOG00000000475	sf3b1	100	93.321	ENSTGUG00000010553	SF3B1	83	93.321	Taeniopygia_guttata
ENSMMOG00000000475	sf3b1	100	97.361	ENSTRUG00000015534	sf3b1	84	97.361	Takifugu_rubripes
ENSMMOG00000000475	sf3b1	92	96.544	ENSTBEG00000008714	SF3B1	84	96.544	Tupaia_belangeri
ENSMMOG00000000475	sf3b1	91	92.014	ENSTTRG00000003414	SF3B1	76	92.014	Tursiops_truncatus
ENSMMOG00000000475	sf3b1	92	83.908	ENSUAMG00000018506	SF3B1	87	98.566	Ursus_americanus
ENSMMOG00000000475	sf3b1	100	93.059	ENSUMAG00000020945	SF3B1	84	93.059	Ursus_maritimus
ENSMMOG00000000475	sf3b1	94	92.593	ENSVPAG00000005798	SF3B1	79	92.593	Vicugna_pacos
ENSMMOG00000000475	sf3b1	100	93.059	ENSVVUG00000025948	SF3B1	79	93.059	Vulpes_vulpes
ENSMMOG00000000475	sf3b1	100	91.507	ENSXETG00000013339	sf3b1	83	91.416	Xenopus_tropicalis
ENSMMOG00000000475	sf3b1	100	92.518	ENSXCOG00000018086	sf3b1	83	93.431	Xiphophorus_couchianus
ENSMMOG00000000475	sf3b1	100	97.818	ENSXMAG00000007369	sf3b1	85	97.818	Xiphophorus_maculatus