EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000000490 (Gene tree)
Gene ID: -
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 3804 bases
Position: chrKV751352.1:4117388-4121191
Accession: ZDB-GENE-040801-197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000000576	HVSL	PF09749.9	3.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000000584	-	774	-	ENSMMOP00000000576	257 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000000490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000000490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000000490	usb1	88	52.193	ENSG00000103005	USB1	100	53.738	Homo_sapiens
ENSMMOG00000000490	usb1	96	68.826	ENSAPOG00000011942	usb1	80	74.107	Acanthochromis_polyacanthus
ENSMMOG00000000490	usb1	88	52.193	ENSAMEG00000017205	USB1	85	52.193	Ailuropoda_melanoleuca
ENSMMOG00000000490	usb1	90	75.862	ENSACIG00000012234	usb1	86	75.862	Amphilophus_citrinellus
ENSMMOG00000000490	usb1	100	64.664	ENSAOCG00000014831	usb1	80	75.556	Amphiprion_ocellaris
ENSMMOG00000000490	usb1	100	63.958	ENSAPEG00000000296	usb1	80	74.667	Amphiprion_percula
ENSMMOG00000000490	usb1	87	79.018	ENSATEG00000009348	usb1	80	79.018	Anabas_testudineus
ENSMMOG00000000490	usb1	87	55.752	ENSAPLG00000002756	USB1	100	55.752	Anas_platyrhynchos
ENSMMOG00000000490	usb1	87	53.982	ENSACAG00000015481	USB1	99	53.540	Anolis_carolinensis
ENSMMOG00000000490	usb1	88	52.193	ENSANAG00000035640	USB1	86	52.193	Aotus_nancymaae
ENSMMOG00000000490	usb1	87	75.893	ENSACLG00000020586	usb1	80	75.893	Astatotilapia_calliptera
ENSMMOG00000000490	usb1	89	63.043	ENSAMXG00000040146	usb1	76	63.043	Astyanax_mexicanus
ENSMMOG00000000490	usb1	99	50.769	ENSBTAG00000015758	USB1	98	50.385	Bos_taurus
ENSMMOG00000000490	usb1	88	52.193	ENSCJAG00000011733	USB1	86	52.193	Callithrix_jacchus
ENSMMOG00000000490	usb1	99	46.816	ENSCAFG00000008556	USB1	61	51.101	Canis_familiaris
ENSMMOG00000000490	usb1	99	49.231	ENSCAFG00020009263	USB1	85	51.101	Canis_lupus_dingo
ENSMMOG00000000490	usb1	99	50.000	ENSCHIG00000024290	USB1	98	50.000	Capra_hircus
ENSMMOG00000000490	usb1	88	51.770	ENSTSYG00000006997	USB1	85	51.770	Carlito_syrichta
ENSMMOG00000000490	usb1	89	41.485	ENSCAPG00000009057	USB1	98	41.485	Cavia_aperea
ENSMMOG00000000490	usb1	99	50.190	ENSCPOG00000014325	USB1	85	51.528	Cavia_porcellus
ENSMMOG00000000490	usb1	88	51.754	ENSCCAG00000022132	USB1	86	51.754	Cebus_capucinus
ENSMMOG00000000490	usb1	87	53.125	ENSCATG00000032174	USB1	85	53.125	Cercocebus_atys
ENSMMOG00000000490	usb1	67	52.023	ENSCLAG00000007363	USB1	98	52.023	Chinchilla_lanigera
ENSMMOG00000000490	usb1	88	52.632	ENSCSAG00000004783	USB1	86	52.632	Chlorocebus_sabaeus
ENSMMOG00000000490	usb1	87	55.357	ENSCPBG00000026943	USB1	81	55.357	Chrysemys_picta_bellii
ENSMMOG00000000490	usb1	87	32.627	ENSCING00000011490	-	92	31.474	Ciona_intestinalis
ENSMMOG00000000490	usb1	88	53.070	ENSCANG00000037135	USB1	85	53.333	Colobus_angolensis_palliatus
ENSMMOG00000000490	usb1	99	50.190	ENSCGRG00001011243	USB1	85	51.528	Cricetulus_griseus_chok1gshd
ENSMMOG00000000490	usb1	99	50.190	ENSCGRG00000013252	USB1	85	51.528	Cricetulus_griseus_crigri
ENSMMOG00000000490	usb1	100	63.799	ENSCSEG00000013881	usb1	83	72.368	Cynoglossus_semilaevis
ENSMMOG00000000490	usb1	87	71.491	ENSCVAG00000009252	usb1	98	71.491	Cyprinodon_variegatus
ENSMMOG00000000490	usb1	87	61.161	ENSDARG00000003841	usb1	81	61.161	Danio_rerio
ENSMMOG00000000490	usb1	99	50.385	ENSDORG00000001888	Usb1	98	50.000	Dipodomys_ordii
ENSMMOG00000000490	usb1	95	39.216	FBgn0037713	CG16790	93	39.200	Drosophila_melanogaster
ENSMMOG00000000490	usb1	99	42.366	ENSETEG00000019682	USB1	85	43.805	Echinops_telfairi
ENSMMOG00000000490	usb1	86	47.297	ENSEBUG00000005889	usb1	78	47.297	Eptatretus_burgeri
ENSMMOG00000000490	usb1	99	51.341	ENSEASG00005005484	USB1	86	53.509	Equus_asinus_asinus
ENSMMOG00000000490	usb1	99	50.192	ENSECAG00000019493	USB1	79	52.193	Equus_caballus
ENSMMOG00000000490	usb1	67	47.977	ENSEEUG00000000154	USB1	65	47.977	Erinaceus_europaeus
ENSMMOG00000000490	usb1	87	67.699	ENSELUG00000010974	usb1	83	67.699	Esox_lucius
ENSMMOG00000000490	usb1	88	51.754	ENSFCAG00000002693	USB1	85	51.754	Felis_catus
ENSMMOG00000000490	usb1	82	55.189	ENSFALG00000006876	USB1	79	55.189	Ficedula_albicollis
ENSMMOG00000000490	usb1	99	50.382	ENSFDAG00000010052	USB1	89	50.420	Fukomys_damarensis
ENSMMOG00000000490	usb1	86	61.157	ENSFHEG00000012334	usb1	76	70.526	Fundulus_heteroclitus
ENSMMOG00000000490	usb1	86	70.721	ENSGMOG00000004228	usb1	99	70.721	Gadus_morhua
ENSMMOG00000000490	usb1	86	54.911	ENSGALG00000035604	USB1	93	54.237	Gallus_gallus
ENSMMOG00000000490	usb1	99	67.273	ENSGAFG00000021890	usb1	88	71.605	Gambusia_affinis
ENSMMOG00000000490	usb1	88	76.991	ENSGACG00000003257	usb1	81	77.679	Gasterosteus_aculeatus
ENSMMOG00000000490	usb1	99	51.493	ENSGAGG00000022572	USB1	82	55.357	Gopherus_agassizii
ENSMMOG00000000490	usb1	88	52.632	ENSGGOG00000017147	USB1	86	52.632	Gorilla_gorilla
ENSMMOG00000000490	usb1	87	75.893	ENSHBUG00000009823	usb1	80	75.893	Haplochromis_burtoni
ENSMMOG00000000490	usb1	99	50.382	ENSHGLG00000016078	USB1	84	50.877	Heterocephalus_glaber_female
ENSMMOG00000000490	usb1	99	50.382	ENSHGLG00100005562	USB1	84	50.877	Heterocephalus_glaber_male
ENSMMOG00000000490	usb1	84	72.350	ENSHCOG00000015633	usb1	99	68.605	Hippocampus_comes
ENSMMOG00000000490	usb1	99	54.167	ENSIPUG00000008601	usb1	78	62.946	Ictalurus_punctatus
ENSMMOG00000000490	usb1	88	52.655	ENSSTOG00000007548	USB1	83	52.655	Ictidomys_tridecemlineatus
ENSMMOG00000000490	usb1	99	51.145	ENSJJAG00000021859	Usb1	86	52.838	Jaculus_jaculus
ENSMMOG00000000490	usb1	88	74.222	ENSKMAG00000007200	usb1	79	74.554	Kryptolebias_marmoratus
ENSMMOG00000000490	usb1	95	66.122	ENSLBEG00000008452	usb1	86	63.469	Labrus_bergylta
ENSMMOG00000000490	usb1	79	56.585	ENSLACG00000000105	USB1	71	57.561	Latimeria_chalumnae
ENSMMOG00000000490	usb1	98	53.516	ENSLOCG00000000465	usb1	79	56.250	Lepisosteus_oculatus
ENSMMOG00000000490	usb1	99	41.912	ENSLAFG00000002267	USB1	84	43.830	Loxodonta_africana
ENSMMOG00000000490	usb1	88	52.632	ENSMFAG00000003926	USB1	86	52.632	Macaca_fascicularis
ENSMMOG00000000490	usb1	88	52.632	ENSMMUG00000022669	USB1	86	52.632	Macaca_mulatta
ENSMMOG00000000490	usb1	88	52.193	ENSMNEG00000042487	USB1	86	52.193	Macaca_nemestrina
ENSMMOG00000000490	usb1	88	52.632	ENSMLEG00000028756	USB1	86	52.632	Mandrillus_leucophaeus
ENSMMOG00000000490	usb1	100	67.266	ENSMAMG00000015092	usb1	82	75.439	Mastacembelus_armatus
ENSMMOG00000000490	usb1	87	75.893	ENSMZEG00005010008	usb1	80	75.893	Maylandia_zebra
ENSMMOG00000000490	usb1	99	49.237	ENSMAUG00000007832	Usb1	86	50.655	Mesocricetus_auratus
ENSMMOG00000000490	usb1	88	52.632	ENSMICG00000004900	USB1	86	52.632	Microcebus_murinus
ENSMMOG00000000490	usb1	99	49.618	ENSMOCG00000022647	Usb1	85	52.193	Microtus_ochrogaster
ENSMMOG00000000490	usb1	84	51.613	ENSMODG00000014067	USB1	84	51.339	Monodelphis_domestica
ENSMMOG00000000490	usb1	88	76.444	ENSMALG00000005930	usb1	84	73.444	Monopterus_albus
ENSMMOG00000000490	usb1	99	50.000	MGP_CAROLIEiJ_G0031421	Usb1	99	51.786	Mus_caroli
ENSMMOG00000000490	usb1	99	50.000	ENSMUSG00000031792	Usb1	99	51.786	Mus_musculus
ENSMMOG00000000490	usb1	99	49.618	MGP_PahariEiJ_G0023019	Usb1	100	52.991	Mus_pahari
ENSMMOG00000000490	usb1	99	50.000	MGP_SPRETEiJ_G0032540	Usb1	85	52.655	Mus_spretus
ENSMMOG00000000490	usb1	99	48.864	ENSMPUG00000004684	USB1	81	51.754	Mustela_putorius_furo
ENSMMOG00000000490	usb1	88	53.070	ENSMLUG00000007400	USB1	99	53.070	Myotis_lucifugus
ENSMMOG00000000490	usb1	99	49.621	ENSNGAG00000009703	Usb1	85	53.070	Nannospalax_galili
ENSMMOG00000000490	usb1	87	70.354	ENSNBRG00000008747	usb1	99	73.709	Neolamprologus_brichardi
ENSMMOG00000000490	usb1	81	53.110	ENSNLEG00000003340	USB1	84	53.110	Nomascus_leucogenys
ENSMMOG00000000490	usb1	51	50.000	ENSOPRG00000011803	USB1	56	50.000	Ochotona_princeps
ENSMMOG00000000490	usb1	99	48.855	ENSODEG00000016214	USB1	85	51.316	Octodon_degus
ENSMMOG00000000490	usb1	99	65.827	ENSONIG00000011063	usb1	81	75.893	Oreochromis_niloticus
ENSMMOG00000000490	usb1	87	52.889	ENSOANG00000012118	USB1	94	52.889	Ornithorhynchus_anatinus
ENSMMOG00000000490	usb1	87	73.661	ENSORLG00000012479	usb1	82	73.661	Oryzias_latipes
ENSMMOG00000000490	usb1	87	72.321	ENSORLG00020018671	usb1	83	72.321	Oryzias_latipes_hni
ENSMMOG00000000490	usb1	87	73.661	ENSORLG00015009679	usb1	99	66.914	Oryzias_latipes_hsok
ENSMMOG00000000490	usb1	97	68.000	ENSOMEG00000012930	usb1	81	74.107	Oryzias_melastigma
ENSMMOG00000000490	usb1	88	49.123	ENSOGAG00000003273	USB1	85	49.123	Otolemur_garnettii
ENSMMOG00000000490	usb1	88	52.193	ENSOARG00000001107	USB1	87	52.193	Ovis_aries
ENSMMOG00000000490	usb1	88	52.193	ENSPPAG00000042137	USB1	86	52.193	Pan_paniscus
ENSMMOG00000000490	usb1	88	51.316	ENSPPRG00000024797	USB1	85	51.316	Panthera_pardus
ENSMMOG00000000490	usb1	88	51.316	ENSPTIG00000007506	USB1	85	51.316	Panthera_tigris_altaica
ENSMMOG00000000490	usb1	83	54.206	ENSPTRG00000008172	USB1	100	54.206	Pan_troglodytes
ENSMMOG00000000490	usb1	88	52.632	ENSPANG00000025138	USB1	86	52.632	Papio_anubis
ENSMMOG00000000490	usb1	86	61.883	ENSPKIG00000015109	usb1	75	61.883	Paramormyrops_kingsleyae
ENSMMOG00000000490	usb1	87	44.737	ENSPSIG00000004305	USB1	100	44.737	Pelodiscus_sinensis
ENSMMOG00000000490	usb1	100	64.202	ENSPMGG00000017725	usb1	98	64.202	Periophthalmus_magnuspinnatus
ENSMMOG00000000490	usb1	99	47.566	ENSPEMG00000016183	Usb1	84	50.877	Peromyscus_maniculatus_bairdii
ENSMMOG00000000490	usb1	88	51.092	ENSPMAG00000000462	usb1	97	51.092	Petromyzon_marinus
ENSMMOG00000000490	usb1	99	67.391	ENSPFOG00000011130	usb1	81	75.893	Poecilia_formosa
ENSMMOG00000000490	usb1	99	66.667	ENSPLAG00000009820	usb1	81	75.000	Poecilia_latipinna
ENSMMOG00000000490	usb1	99	67.391	ENSPMEG00000006402	usb1	81	75.893	Poecilia_mexicana
ENSMMOG00000000490	usb1	86	64.876	ENSPREG00000001047	usb1	77	76.440	Poecilia_reticulata
ENSMMOG00000000490	usb1	81	50.000	ENSPPYG00000007401	USB1	83	50.000	Pongo_abelii
ENSMMOG00000000490	usb1	88	52.632	ENSPCOG00000022612	USB1	86	52.632	Propithecus_coquereli
ENSMMOG00000000490	usb1	99	49.805	ENSPVAG00000004613	USB1	98	49.805	Pteropus_vampyrus
ENSMMOG00000000490	usb1	87	75.893	ENSPNYG00000022262	usb1	80	75.893	Pundamilia_nyererei
ENSMMOG00000000490	usb1	96	59.036	ENSPNAG00000011736	usb1	76	63.839	Pygocentrus_nattereri
ENSMMOG00000000490	usb1	99	50.000	ENSRNOG00000013216	Usb1	85	51.754	Rattus_norvegicus
ENSMMOG00000000490	usb1	88	49.561	ENSRBIG00000044466	USB1	100	54.206	Rhinopithecus_bieti
ENSMMOG00000000490	usb1	88	52.632	ENSRROG00000029211	USB1	86	52.632	Rhinopithecus_roxellana
ENSMMOG00000000490	usb1	88	52.193	ENSSBOG00000029362	USB1	86	52.193	Saimiri_boliviensis_boliviensis
ENSMMOG00000000490	usb1	84	49.770	ENSSHAG00000006993	USB1	89	50.000	Sarcophilus_harrisii
ENSMMOG00000000490	usb1	88	63.436	ENSSFOG00015023663	usb1	72	63.436	Scleropages_formosus
ENSMMOG00000000490	usb1	88	72.199	ENSSMAG00000015834	usb1	82	72.199	Scophthalmus_maximus
ENSMMOG00000000490	usb1	99	71.691	ENSSDUG00000002949	usb1	99	73.134	Seriola_dumerili
ENSMMOG00000000490	usb1	88	79.111	ENSSLDG00000014174	usb1	81	78.761	Seriola_lalandi_dorsalis
ENSMMOG00000000490	usb1	83	54.673	ENSSPUG00000006741	USB1	100	54.673	Sphenodon_punctatus
ENSMMOG00000000490	usb1	100	63.636	ENSSPAG00000007484	usb1	79	74.554	Stegastes_partitus
ENSMMOG00000000490	usb1	99	48.864	ENSSSCG00000002807	USB1	85	51.754	Sus_scrofa
ENSMMOG00000000490	usb1	82	55.660	ENSTGUG00000004792	USB1	87	53.812	Taeniopygia_guttata
ENSMMOG00000000490	usb1	100	68.773	ENSTRUG00000021069	usb1	84	76.106	Takifugu_rubripes
ENSMMOG00000000490	usb1	100	64.231	ENSTNIG00000000626	usb1	98	64.231	Tetraodon_nigroviridis
ENSMMOG00000000490	usb1	88	36.283	ENSTBEG00000001507	USB1	97	36.283	Tupaia_belangeri
ENSMMOG00000000490	usb1	88	52.193	ENSUAMG00000016823	USB1	85	52.193	Ursus_americanus
ENSMMOG00000000490	usb1	79	54.412	ENSUMAG00000021369	USB1	95	54.412	Ursus_maritimus
ENSMMOG00000000490	usb1	99	47.529	ENSVVUG00000023700	USB1	88	51.101	Vulpes_vulpes
ENSMMOG00000000490	usb1	99	50.781	ENSXETG00000013795	usb1	88	54.545	Xenopus_tropicalis
ENSMMOG00000000490	usb1	87	75.556	ENSXMAG00000024687	usb1	66	75.556	Xiphophorus_maculatus