EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000001161 (Gene tree)
Gene ID: -
Gene Symbol: polr2eb (1 of many)
Alias: RPABC1|RPB5|XAP4|hRPB25|hsRPB5
Full Name: polymerase (RNA) II (DNA directed) polypeptide E%2C b
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 4873 bases
Position: chrKV751319.1:15494224-15499096
Accession: ZDB-GENE-040801-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000001382	RNA_pol_Rpb5_N	PF03871.14	1.9e-34	1	1
ENSMMOP00000001382	RNA_pol_Rpb5_C	PF01191.19	9.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000001410	-	552	-	ENSMMOP00000001382	183 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000001161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000001161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000001161	polr2eb	90	76.963	ENSMMOG00000001167	polr2eb	88	76.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000001161	polr2eb	100	92.350	ENSG00000099817	POLR2E	99	92.350	Homo_sapiens
ENSMMOG00000001161	polr2eb	100	97.814	ENSAPOG00000002935	polr2eb	100	97.814	Acanthochromis_polyacanthus
ENSMMOG00000001161	polr2eb	100	81.429	ENSAMEG00000003159	POLR2E	100	81.429	Ailuropoda_melanoleuca
ENSMMOG00000001161	polr2eb	100	97.268	ENSACIG00000024371	polr2eb	100	97.268	Amphilophus_citrinellus
ENSMMOG00000001161	polr2eb	100	97.814	ENSAOCG00000018166	polr2eb	100	97.814	Amphiprion_ocellaris
ENSMMOG00000001161	polr2eb	100	85.238	ENSAPEG00000009000	polr2eb	100	85.238	Amphiprion_percula
ENSMMOG00000001161	polr2eb	100	97.814	ENSATEG00000023760	polr2eb	100	97.814	Anabas_testudineus
ENSMMOG00000001161	polr2eb	100	92.896	ENSANAG00000038488	POLR2E	99	92.896	Aotus_nancymaae
ENSMMOG00000001161	polr2eb	100	97.268	ENSACLG00000005254	polr2eb	100	97.268	Astatotilapia_calliptera
ENSMMOG00000001161	polr2eb	100	84.762	ENSAMXG00000018915	POLR2E	100	84.762	Astyanax_mexicanus
ENSMMOG00000001161	polr2eb	100	81.429	ENSBTAG00000020776	POLR2E	100	81.429	Bos_taurus
ENSMMOG00000001161	polr2eb	99	69.231	WBGene00019246	rpb-5	99	69.231	Caenorhabditis_elegans
ENSMMOG00000001161	polr2eb	62	70.714	ENSCJAG00000007666	-	77	70.714	Callithrix_jacchus
ENSMMOG00000001161	polr2eb	100	78.571	ENSCAFG00000019546	POLR2E	100	78.571	Canis_familiaris
ENSMMOG00000001161	polr2eb	100	81.429	ENSCAFG00020017111	POLR2E	100	81.429	Canis_lupus_dingo
ENSMMOG00000001161	polr2eb	100	81.429	ENSCHIG00000014151	POLR2E	100	81.429	Capra_hircus
ENSMMOG00000001161	polr2eb	100	73.224	ENSTSYG00000026377	POLR2E	100	73.224	Carlito_syrichta
ENSMMOG00000001161	polr2eb	90	80.208	ENSCAPG00000010843	POLR2E	93	80.208	Cavia_aperea
ENSMMOG00000001161	polr2eb	100	81.429	ENSCPOG00000001542	POLR2E	100	81.429	Cavia_porcellus
ENSMMOG00000001161	polr2eb	100	92.896	ENSCCAG00000025658	POLR2E	99	92.896	Cebus_capucinus
ENSMMOG00000001161	polr2eb	100	92.896	ENSCATG00000008926	POLR2E	99	92.896	Cercocebus_atys
ENSMMOG00000001161	polr2eb	100	80.952	ENSCLAG00000014874	-	100	80.952	Chinchilla_lanigera
ENSMMOG00000001161	polr2eb	97	60.488	ENSCLAG00000009238	-	100	60.488	Chinchilla_lanigera
ENSMMOG00000001161	polr2eb	100	81.429	ENSCSAG00000012336	POLR2E	100	81.429	Chlorocebus_sabaeus
ENSMMOG00000001161	polr2eb	100	81.905	ENSCPBG00000009702	POLR2E	100	81.905	Chrysemys_picta_bellii
ENSMMOG00000001161	polr2eb	100	72.857	ENSCING00000024933	-	99	72.857	Ciona_intestinalis
ENSMMOG00000001161	polr2eb	100	92.896	ENSCANG00000025560	POLR2E	99	92.896	Colobus_angolensis_palliatus
ENSMMOG00000001161	polr2eb	100	81.429	ENSCGRG00001022927	Polr2e	100	81.429	Cricetulus_griseus_chok1gshd
ENSMMOG00000001161	polr2eb	100	75.349	ENSCGRG00000016441	Polr2e	100	75.349	Cricetulus_griseus_crigri
ENSMMOG00000001161	polr2eb	100	97.268	ENSCSEG00000007107	polr2eb	100	97.268	Cynoglossus_semilaevis
ENSMMOG00000001161	polr2eb	100	97.814	ENSCVAG00000019940	polr2eb	100	97.814	Cyprinodon_variegatus
ENSMMOG00000001161	polr2eb	100	84.286	ENSDARG00000026183	polr2eb	100	84.286	Danio_rerio
ENSMMOG00000001161	polr2eb	89	79.474	ENSDNOG00000044994	POLR2E	84	79.474	Dasypus_novemcinctus
ENSMMOG00000001161	polr2eb	100	81.429	ENSDORG00000001154	Polr2e	100	81.429	Dipodomys_ordii
ENSMMOG00000001161	polr2eb	99	73.206	FBgn0033571	Rpb5	99	73.206	Drosophila_melanogaster
ENSMMOG00000001161	polr2eb	71	75.159	ENSEBUG00000010159	-	76	75.159	Eptatretus_burgeri
ENSMMOG00000001161	polr2eb	64	69.655	ENSEASG00005021615	POLR2E	69	64.072	Equus_asinus_asinus
ENSMMOG00000001161	polr2eb	100	93.443	ENSECAG00000011124	POLR2E	100	93.443	Equus_caballus
ENSMMOG00000001161	polr2eb	100	95.628	ENSELUG00000005815	POLR2E	100	95.628	Esox_lucius
ENSMMOG00000001161	polr2eb	100	94.536	ENSELUG00000020646	polr2e	100	94.536	Esox_lucius
ENSMMOG00000001161	polr2eb	99	93.407	ENSFCAG00000007318	POLR2E	100	93.407	Felis_catus
ENSMMOG00000001161	polr2eb	90	80.729	ENSFALG00000013986	POLR2E	99	80.729	Ficedula_albicollis
ENSMMOG00000001161	polr2eb	100	81.429	ENSFDAG00000014539	POLR2E	100	81.429	Fukomys_damarensis
ENSMMOG00000001161	polr2eb	100	97.814	ENSFHEG00000022398	polr2eb	100	97.814	Fundulus_heteroclitus
ENSMMOG00000001161	polr2eb	100	83.810	ENSGMOG00000007615	polr2eb	100	83.810	Gadus_morhua
ENSMMOG00000001161	polr2eb	100	81.905	ENSGALG00000002591	POLR2E	100	81.905	Gallus_gallus
ENSMMOG00000001161	polr2eb	100	97.268	ENSGAFG00000005087	polr2eb	100	97.268	Gambusia_affinis
ENSMMOG00000001161	polr2eb	100	83.810	ENSGACG00000013247	polr2eb	100	83.810	Gasterosteus_aculeatus
ENSMMOG00000001161	polr2eb	100	81.905	ENSGAGG00000008356	POLR2E	100	81.905	Gopherus_agassizii
ENSMMOG00000001161	polr2eb	100	92.896	ENSGGOG00000011267	POLR2E	99	92.896	Gorilla_gorilla
ENSMMOG00000001161	polr2eb	63	92.174	ENSHBUG00000011099	polr2eb	100	92.174	Haplochromis_burtoni
ENSMMOG00000001161	polr2eb	100	82.381	ENSHGLG00000013330	POLR2E	100	82.381	Heterocephalus_glaber_female
ENSMMOG00000001161	polr2eb	100	82.381	ENSHGLG00100011014	POLR2E	100	82.381	Heterocephalus_glaber_male
ENSMMOG00000001161	polr2eb	100	96.721	ENSHCOG00000000906	polr2eb	100	96.721	Hippocampus_comes
ENSMMOG00000001161	polr2eb	50	86.316	ENSHCOG00000012099	-	75	86.316	Hippocampus_comes
ENSMMOG00000001161	polr2eb	100	85.238	ENSIPUG00000019801	polr2e	100	85.238	Ictalurus_punctatus
ENSMMOG00000001161	polr2eb	100	81.429	ENSSTOG00000002853	POLR2E	100	81.429	Ictidomys_tridecemlineatus
ENSMMOG00000001161	polr2eb	100	81.429	ENSJJAG00000016595	-	100	81.429	Jaculus_jaculus
ENSMMOG00000001161	polr2eb	100	86.885	ENSJJAG00000003145	-	100	86.885	Jaculus_jaculus
ENSMMOG00000001161	polr2eb	73	68.874	ENSJJAG00000015812	-	100	68.874	Jaculus_jaculus
ENSMMOG00000001161	polr2eb	100	85.238	ENSKMAG00000005954	polr2eb	100	85.238	Kryptolebias_marmoratus
ENSMMOG00000001161	polr2eb	100	97.814	ENSLBEG00000024802	polr2eb	100	97.814	Labrus_bergylta
ENSMMOG00000001161	polr2eb	100	81.905	ENSLACG00000013686	POLR2E	100	81.905	Latimeria_chalumnae
ENSMMOG00000001161	polr2eb	74	80.864	ENSLOCG00000004599	POLR2E	100	80.864	Lepisosteus_oculatus
ENSMMOG00000001161	polr2eb	100	62.736	ENSLAFG00000025587	POLR2E	100	62.736	Loxodonta_africana
ENSMMOG00000001161	polr2eb	100	92.896	ENSMFAG00000002884	POLR2E	99	92.896	Macaca_fascicularis
ENSMMOG00000001161	polr2eb	100	92.896	ENSMMUG00000013927	POLR2E	99	92.896	Macaca_mulatta
ENSMMOG00000001161	polr2eb	100	92.896	ENSMNEG00000034046	-	99	92.896	Macaca_nemestrina
ENSMMOG00000001161	polr2eb	100	51.659	ENSMNEG00000033452	-	100	51.659	Macaca_nemestrina
ENSMMOG00000001161	polr2eb	91	74.699	ENSMLEG00000012405	POLR2E	93	74.699	Mandrillus_leucophaeus
ENSMMOG00000001161	polr2eb	100	97.814	ENSMAMG00000018703	polr2eb	100	97.814	Mastacembelus_armatus
ENSMMOG00000001161	polr2eb	100	97.268	ENSMZEG00005010796	polr2eb	100	97.268	Maylandia_zebra
ENSMMOG00000001161	polr2eb	100	81.043	ENSMGAG00000003769	POLR2E	100	81.043	Meleagris_gallopavo
ENSMMOG00000001161	polr2eb	100	52.857	ENSMAUG00000011003	-	100	52.857	Mesocricetus_auratus
ENSMMOG00000001161	polr2eb	91	79.793	ENSMAUG00000010125	-	100	80.105	Mesocricetus_auratus
ENSMMOG00000001161	polr2eb	100	93.443	ENSMICG00000013063	POLR2E	99	93.443	Microcebus_murinus
ENSMMOG00000001161	polr2eb	100	81.429	ENSMOCG00000013414	Polr2e	100	81.429	Microtus_ochrogaster
ENSMMOG00000001161	polr2eb	100	81.905	ENSMODG00000005494	POLR2E	100	81.905	Monodelphis_domestica
ENSMMOG00000001161	polr2eb	100	84.286	ENSMALG00000021888	polr2eb	100	84.286	Monopterus_albus
ENSMMOG00000001161	polr2eb	100	81.429	MGP_CAROLIEiJ_G0015561	Polr2e	100	81.429	Mus_caroli
ENSMMOG00000001161	polr2eb	100	81.429	ENSMUSG00000004667	Polr2e	100	81.429	Mus_musculus
ENSMMOG00000001161	polr2eb	100	81.429	MGP_PahariEiJ_G0030974	Polr2e	100	81.429	Mus_pahari
ENSMMOG00000001161	polr2eb	100	81.429	MGP_SPRETEiJ_G0016379	Polr2e	100	81.429	Mus_spretus
ENSMMOG00000001161	polr2eb	100	80.952	ENSMPUG00000008953	POLR2E	100	80.952	Mustela_putorius_furo
ENSMMOG00000001161	polr2eb	100	81.429	ENSMLUG00000013193	POLR2E	100	81.429	Myotis_lucifugus
ENSMMOG00000001161	polr2eb	67	81.890	ENSMLUG00000006376	-	78	81.890	Myotis_lucifugus
ENSMMOG00000001161	polr2eb	100	81.429	ENSNGAG00000001147	Polr2e	100	81.429	Nannospalax_galili
ENSMMOG00000001161	polr2eb	83	58.659	ENSNGAG00000017344	-	96	58.659	Nannospalax_galili
ENSMMOG00000001161	polr2eb	100	97.268	ENSNBRG00000022772	polr2eb	100	97.268	Neolamprologus_brichardi
ENSMMOG00000001161	polr2eb	100	89.130	ENSNLEG00000001207	-	100	89.130	Nomascus_leucogenys
ENSMMOG00000001161	polr2eb	100	67.839	ENSNLEG00000031364	-	100	67.839	Nomascus_leucogenys
ENSMMOG00000001161	polr2eb	100	70.952	ENSOPRG00000008331	POLR2E	100	70.952	Ochotona_princeps
ENSMMOG00000001161	polr2eb	100	81.429	ENSODEG00000013230	-	100	81.429	Octodon_degus
ENSMMOG00000001161	polr2eb	87	69.892	ENSODEG00000007985	-	100	69.892	Octodon_degus
ENSMMOG00000001161	polr2eb	100	69.271	ENSODEG00000011490	-	100	69.271	Octodon_degus
ENSMMOG00000001161	polr2eb	100	84.286	ENSONIG00000002519	polr2eb	100	84.286	Oreochromis_niloticus
ENSMMOG00000001161	polr2eb	100	97.268	ENSORLG00000015346	polr2eb	100	97.268	Oryzias_latipes
ENSMMOG00000001161	polr2eb	100	97.268	ENSORLG00020020700	polr2e	100	97.268	Oryzias_latipes_hni
ENSMMOG00000001161	polr2eb	100	97.268	ENSORLG00015016842	polr2e	100	97.268	Oryzias_latipes_hsok
ENSMMOG00000001161	polr2eb	100	85.238	ENSOMEG00000002709	polr2eb	100	85.238	Oryzias_melastigma
ENSMMOG00000001161	polr2eb	100	81.429	ENSOGAG00000012311	POLR2E	100	81.429	Otolemur_garnettii
ENSMMOG00000001161	polr2eb	100	81.429	ENSOARG00000010994	POLR2E	100	81.429	Ovis_aries
ENSMMOG00000001161	polr2eb	90	92.683	ENSPPAG00000003145	POLR2E	99	92.683	Pan_paniscus
ENSMMOG00000001161	polr2eb	99	93.407	ENSPPRG00000000777	POLR2E	100	93.407	Panthera_pardus
ENSMMOG00000001161	polr2eb	90	84.242	ENSPTIG00000012237	POLR2E	98	84.242	Panthera_tigris_altaica
ENSMMOG00000001161	polr2eb	100	92.896	ENSPTRG00000010183	POLR2E	99	92.896	Pan_troglodytes
ENSMMOG00000001161	polr2eb	100	92.896	ENSPANG00000018011	POLR2E	99	92.896	Papio_anubis
ENSMMOG00000001161	polr2eb	100	96.175	ENSPKIG00000009607	POLR2E	100	96.175	Paramormyrops_kingsleyae
ENSMMOG00000001161	polr2eb	100	96.175	ENSPKIG00000024123	POLR2E	100	96.175	Paramormyrops_kingsleyae
ENSMMOG00000001161	polr2eb	97	78.537	ENSPSIG00000002870	POLR2E	99	78.537	Pelodiscus_sinensis
ENSMMOG00000001161	polr2eb	100	97.814	ENSPMGG00000014354	polr2eb	100	97.814	Periophthalmus_magnuspinnatus
ENSMMOG00000001161	polr2eb	100	81.429	ENSPEMG00000023261	Polr2e	100	81.429	Peromyscus_maniculatus_bairdii
ENSMMOG00000001161	polr2eb	89	79.894	ENSPCIG00000007312	POLR2E	75	79.894	Phascolarctos_cinereus
ENSMMOG00000001161	polr2eb	100	84.762	ENSPFOG00000005734	polr2eb	100	84.762	Poecilia_formosa
ENSMMOG00000001161	polr2eb	100	97.268	ENSPLAG00000014496	polr2eb	100	97.268	Poecilia_latipinna
ENSMMOG00000001161	polr2eb	100	97.268	ENSPMEG00000008053	polr2eb	100	97.268	Poecilia_mexicana
ENSMMOG00000001161	polr2eb	100	97.268	ENSPREG00000006489	polr2eb	100	97.268	Poecilia_reticulata
ENSMMOG00000001161	polr2eb	100	73.934	ENSPPYG00000009305	POLR2E	100	73.934	Pongo_abelii
ENSMMOG00000001161	polr2eb	100	92.896	ENSPCOG00000014491	POLR2E	98	92.896	Propithecus_coquereli
ENSMMOG00000001161	polr2eb	75	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSMMOG00000001161	polr2eb	89	83.158	ENSPNYG00000019797	polr2eb	96	83.158	Pundamilia_nyererei
ENSMMOG00000001161	polr2eb	100	96.721	ENSPNAG00000026263	POLR2E	100	96.721	Pygocentrus_nattereri
ENSMMOG00000001161	polr2eb	100	81.429	ENSRNOG00000013545	Polr2e	100	81.429	Rattus_norvegicus
ENSMMOG00000001161	polr2eb	100	57.346	ENSRBIG00000027259	-	100	57.346	Rhinopithecus_bieti
ENSMMOG00000001161	polr2eb	100	92.896	ENSRBIG00000028726	-	99	92.896	Rhinopithecus_bieti
ENSMMOG00000001161	polr2eb	100	92.896	ENSRROG00000043763	POLR2E	99	92.896	Rhinopithecus_roxellana
ENSMMOG00000001161	polr2eb	99	38.249	YBR154C	RPB5	98	38.249	Saccharomyces_cerevisiae
ENSMMOG00000001161	polr2eb	100	92.896	ENSSBOG00000027241	POLR2E	99	92.896	Saimiri_boliviensis_boliviensis
ENSMMOG00000001161	polr2eb	100	81.905	ENSSHAG00000010690	POLR2E	100	81.905	Sarcophilus_harrisii
ENSMMOG00000001161	polr2eb	100	97.814	ENSSFOG00015006073	polr2e	100	97.814	Scleropages_formosus
ENSMMOG00000001161	polr2eb	100	89.071	ENSSMAG00000012782	polr2eb	100	89.071	Scophthalmus_maximus
ENSMMOG00000001161	polr2eb	100	97.814	ENSSDUG00000003352	polr2eb	100	97.814	Seriola_dumerili
ENSMMOG00000001161	polr2eb	100	97.814	ENSSLDG00000004965	polr2eb	100	97.814	Seriola_lalandi_dorsalis
ENSMMOG00000001161	polr2eb	100	81.905	ENSSPUG00000006114	POLR2E	100	81.905	Sphenodon_punctatus
ENSMMOG00000001161	polr2eb	100	97.814	ENSSPAG00000017556	polr2eb	100	97.814	Stegastes_partitus
ENSMMOG00000001161	polr2eb	100	81.429	ENSSSCG00000021472	POLR2E	100	81.429	Sus_scrofa
ENSMMOG00000001161	polr2eb	75	82.609	ENSTGUG00000000922	POLR2E	96	82.609	Taeniopygia_guttata
ENSMMOG00000001161	polr2eb	100	97.814	ENSTRUG00000018238	polr2eb	100	97.814	Takifugu_rubripes
ENSMMOG00000001161	polr2eb	100	85.238	ENSTNIG00000013187	polr2eb	100	85.238	Tetraodon_nigroviridis
ENSMMOG00000001161	polr2eb	100	80.952	ENSTTRG00000001484	POLR2E	100	80.952	Tursiops_truncatus
ENSMMOG00000001161	polr2eb	100	92.896	ENSUAMG00000009166	POLR2E	100	92.896	Ursus_americanus
ENSMMOG00000001161	polr2eb	100	81.429	ENSVVUG00000022818	POLR2E	54	81.429	Vulpes_vulpes
ENSMMOG00000001161	polr2eb	100	82.381	ENSXETG00000003291	polr2e	100	82.381	Xenopus_tropicalis
ENSMMOG00000001161	polr2eb	100	97.268	ENSXCOG00000009197	polr2eb	100	97.268	Xiphophorus_couchianus
ENSMMOG00000001161	polr2eb	100	97.268	ENSXMAG00000026495	polr2eb	100	97.268	Xiphophorus_maculatus