EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000001167 (Gene tree)
Gene ID: -
Gene Symbol: polr2eb (1 of many)
Alias: RPABC1|RPB5|XAP4|hRPB25|hsRPB5
Full Name: polymerase (RNA) II (DNA directed) polypeptide E%2C b
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 6020 bases
Position: chrKV751319.1:15500135-15506154
Accession: ZDB-GENE-040801-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000001390	RNA_pol_Rpb5_N	PF03871.14	6.6e-21	1	1
ENSMMOP00000001390	RNA_pol_Rpb5_C	PF01191.19	7.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000001419	-	654	-	ENSMMOP00000001390	217 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000001167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000001167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000001167	polr2eb	88	76.963	ENSMMOG00000001161	polr2eb	90	76.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000001167	polr2eb	88	85.864	ENSG00000099817	POLR2E	99	84.211	Homo_sapiens
ENSMMOG00000001167	polr2eb	88	89.005	ENSAPOG00000002935	polr2eb	91	89.005	Acanthochromis_polyacanthus
ENSMMOG00000001167	polr2eb	88	86.387	ENSAMEG00000003159	POLR2E	91	86.387	Ailuropoda_melanoleuca
ENSMMOG00000001167	polr2eb	88	74.869	ENSACIG00000024371	polr2eb	90	74.869	Amphilophus_citrinellus
ENSMMOG00000001167	polr2eb	88	89.005	ENSAOCG00000018166	polr2eb	91	89.005	Amphiprion_ocellaris
ENSMMOG00000001167	polr2eb	88	89.005	ENSAPEG00000009000	polr2eb	91	89.005	Amphiprion_percula
ENSMMOG00000001167	polr2eb	88	89.005	ENSATEG00000023760	polr2eb	91	89.005	Anabas_testudineus
ENSMMOG00000001167	polr2eb	93	83.168	ENSANAG00000038488	POLR2E	99	83.168	Aotus_nancymaae
ENSMMOG00000001167	polr2eb	88	88.482	ENSACLG00000005254	polr2eb	91	88.482	Astatotilapia_calliptera
ENSMMOG00000001167	polr2eb	88	88.482	ENSAMXG00000018915	POLR2E	91	88.482	Astyanax_mexicanus
ENSMMOG00000001167	polr2eb	88	86.387	ENSBTAG00000020776	POLR2E	91	86.387	Bos_taurus
ENSMMOG00000001167	polr2eb	88	73.158	WBGene00019246	rpb-5	90	73.158	Caenorhabditis_elegans
ENSMMOG00000001167	polr2eb	65	80.714	ENSCJAG00000007666	-	77	80.714	Callithrix_jacchus
ENSMMOG00000001167	polr2eb	88	83.246	ENSCAFG00000019546	POLR2E	91	83.246	Canis_familiaris
ENSMMOG00000001167	polr2eb	88	86.387	ENSCAFG00020017111	POLR2E	91	86.387	Canis_lupus_dingo
ENSMMOG00000001167	polr2eb	88	86.387	ENSCHIG00000014151	POLR2E	91	86.387	Capra_hircus
ENSMMOG00000001167	polr2eb	88	70.157	ENSTSYG00000026377	POLR2E	90	70.157	Carlito_syrichta
ENSMMOG00000001167	polr2eb	92	83.085	ENSCAPG00000010843	POLR2E	98	83.085	Cavia_aperea
ENSMMOG00000001167	polr2eb	88	86.387	ENSCPOG00000001542	POLR2E	91	86.387	Cavia_porcellus
ENSMMOG00000001167	polr2eb	91	84.772	ENSCCAG00000025658	POLR2E	99	84.772	Cebus_capucinus
ENSMMOG00000001167	polr2eb	88	86.387	ENSCATG00000008926	POLR2E	91	86.387	Cercocebus_atys
ENSMMOG00000001167	polr2eb	86	66.310	ENSCLAG00000009238	-	90	66.310	Chinchilla_lanigera
ENSMMOG00000001167	polr2eb	88	85.864	ENSCLAG00000014874	-	91	85.864	Chinchilla_lanigera
ENSMMOG00000001167	polr2eb	88	86.387	ENSCSAG00000012336	POLR2E	91	86.387	Chlorocebus_sabaeus
ENSMMOG00000001167	polr2eb	88	86.911	ENSCPBG00000009702	POLR2E	91	86.911	Chrysemys_picta_bellii
ENSMMOG00000001167	polr2eb	88	79.058	ENSCING00000024933	-	91	79.058	Ciona_intestinalis
ENSMMOG00000001167	polr2eb	91	84.343	ENSCANG00000025560	POLR2E	99	84.343	Colobus_angolensis_palliatus
ENSMMOG00000001167	polr2eb	88	85.864	ENSCGRG00001022927	Polr2e	91	85.864	Cricetulus_griseus_chok1gshd
ENSMMOG00000001167	polr2eb	88	79.592	ENSCGRG00000016441	Polr2e	91	79.592	Cricetulus_griseus_crigri
ENSMMOG00000001167	polr2eb	88	89.005	ENSCSEG00000007107	polr2eb	83	89.005	Cynoglossus_semilaevis
ENSMMOG00000001167	polr2eb	88	89.005	ENSCVAG00000019940	polr2eb	91	89.005	Cyprinodon_variegatus
ENSMMOG00000001167	polr2eb	88	87.958	ENSDARG00000026183	polr2eb	91	87.958	Danio_rerio
ENSMMOG00000001167	polr2eb	79	85.965	ENSDNOG00000044994	POLR2E	75	85.965	Dasypus_novemcinctus
ENSMMOG00000001167	polr2eb	88	86.387	ENSDORG00000001154	Polr2e	91	86.387	Dipodomys_ordii
ENSMMOG00000001167	polr2eb	88	78.421	FBgn0033571	Rpb5	90	78.421	Drosophila_melanogaster
ENSMMOG00000001167	polr2eb	64	83.333	ENSEBUG00000010159	-	67	83.333	Eptatretus_burgeri
ENSMMOG00000001167	polr2eb	67	79.310	ENSEASG00005021615	POLR2E	61	79.310	Equus_asinus_asinus
ENSMMOG00000001167	polr2eb	79	84.884	ENSECAG00000011124	POLR2E	90	72.775	Equus_caballus
ENSMMOG00000001167	polr2eb	88	87.435	ENSELUG00000020646	polr2e	91	87.435	Esox_lucius
ENSMMOG00000001167	polr2eb	88	87.435	ENSELUG00000005815	POLR2E	91	87.435	Esox_lucius
ENSMMOG00000001167	polr2eb	88	85.864	ENSFCAG00000007318	POLR2E	91	85.864	Felis_catus
ENSMMOG00000001167	polr2eb	88	86.911	ENSFALG00000013986	POLR2E	98	86.911	Ficedula_albicollis
ENSMMOG00000001167	polr2eb	88	86.387	ENSFDAG00000014539	POLR2E	91	86.387	Fukomys_damarensis
ENSMMOG00000001167	polr2eb	88	89.005	ENSFHEG00000022398	polr2eb	91	89.005	Fundulus_heteroclitus
ENSMMOG00000001167	polr2eb	88	88.482	ENSGMOG00000007615	polr2eb	91	88.482	Gadus_morhua
ENSMMOG00000001167	polr2eb	88	86.911	ENSGALG00000002591	POLR2E	91	86.911	Gallus_gallus
ENSMMOG00000001167	polr2eb	88	88.482	ENSGAFG00000005087	polr2eb	91	88.482	Gambusia_affinis
ENSMMOG00000001167	polr2eb	88	87.958	ENSGACG00000013247	polr2eb	91	87.958	Gasterosteus_aculeatus
ENSMMOG00000001167	polr2eb	88	86.911	ENSGAGG00000008356	POLR2E	91	86.911	Gopherus_agassizii
ENSMMOG00000001167	polr2eb	91	84.343	ENSGGOG00000011267	POLR2E	99	84.343	Gorilla_gorilla
ENSMMOG00000001167	polr2eb	65	83.099	ENSHBUG00000011099	polr2eb	100	83.099	Haplochromis_burtoni
ENSMMOG00000001167	polr2eb	88	86.911	ENSHGLG00000013330	POLR2E	91	86.911	Heterocephalus_glaber_female
ENSMMOG00000001167	polr2eb	88	86.911	ENSHGLG00100011014	POLR2E	91	86.911	Heterocephalus_glaber_male
ENSMMOG00000001167	polr2eb	88	87.958	ENSHCOG00000000906	polr2eb	91	87.958	Hippocampus_comes
ENSMMOG00000001167	polr2eb	51	89.189	ENSHCOG00000012099	-	87	89.189	Hippocampus_comes
ENSMMOG00000001167	polr2eb	88	89.005	ENSIPUG00000019801	polr2e	91	89.005	Ictalurus_punctatus
ENSMMOG00000001167	polr2eb	88	86.387	ENSSTOG00000002853	POLR2E	91	86.387	Ictidomys_tridecemlineatus
ENSMMOG00000001167	polr2eb	88	67.016	ENSJJAG00000003145	-	89	67.016	Jaculus_jaculus
ENSMMOG00000001167	polr2eb	88	85.864	ENSJJAG00000016595	-	91	85.864	Jaculus_jaculus
ENSMMOG00000001167	polr2eb	65	73.050	ENSJJAG00000015812	-	88	73.050	Jaculus_jaculus
ENSMMOG00000001167	polr2eb	88	89.005	ENSKMAG00000005954	polr2eb	91	89.005	Kryptolebias_marmoratus
ENSMMOG00000001167	polr2eb	88	89.005	ENSLBEG00000024802	polr2eb	91	89.005	Labrus_bergylta
ENSMMOG00000001167	polr2eb	88	86.911	ENSLACG00000013686	POLR2E	91	86.911	Latimeria_chalumnae
ENSMMOG00000001167	polr2eb	66	88.112	ENSLOCG00000004599	POLR2E	88	88.112	Lepisosteus_oculatus
ENSMMOG00000001167	polr2eb	86	68.617	ENSLAFG00000025587	POLR2E	89	68.617	Loxodonta_africana
ENSMMOG00000001167	polr2eb	88	86.387	ENSMFAG00000002884	POLR2E	91	86.387	Macaca_fascicularis
ENSMMOG00000001167	polr2eb	88	86.387	ENSMMUG00000013927	POLR2E	91	86.387	Macaca_mulatta
ENSMMOG00000001167	polr2eb	92	84.500	ENSMNEG00000034046	-	94	84.500	Macaca_nemestrina
ENSMMOG00000001167	polr2eb	88	57.592	ENSMNEG00000033452	-	89	57.592	Macaca_nemestrina
ENSMMOG00000001167	polr2eb	93	70.647	ENSMLEG00000012405	POLR2E	99	70.647	Mandrillus_leucophaeus
ENSMMOG00000001167	polr2eb	88	89.005	ENSMAMG00000018703	polr2eb	91	89.005	Mastacembelus_armatus
ENSMMOG00000001167	polr2eb	79	88.304	ENSMZEG00005010796	polr2eb	86	88.304	Maylandia_zebra
ENSMMOG00000001167	polr2eb	88	85.938	ENSMGAG00000003769	POLR2E	91	85.938	Meleagris_gallopavo
ENSMMOG00000001167	polr2eb	93	82.178	ENSMAUG00000010125	-	100	85.864	Mesocricetus_auratus
ENSMMOG00000001167	polr2eb	86	63.441	ENSMAUG00000011003	-	94	63.441	Mesocricetus_auratus
ENSMMOG00000001167	polr2eb	90	84.694	ENSMICG00000013063	POLR2E	98	84.694	Microcebus_murinus
ENSMMOG00000001167	polr2eb	88	85.864	ENSMOCG00000013414	Polr2e	91	85.864	Microtus_ochrogaster
ENSMMOG00000001167	polr2eb	88	86.911	ENSMODG00000005494	POLR2E	91	86.911	Monodelphis_domestica
ENSMMOG00000001167	polr2eb	88	88.482	ENSMALG00000021888	polr2eb	91	88.482	Monopterus_albus
ENSMMOG00000001167	polr2eb	88	85.864	MGP_CAROLIEiJ_G0015561	Polr2e	91	85.864	Mus_caroli
ENSMMOG00000001167	polr2eb	88	85.864	ENSMUSG00000004667	Polr2e	91	85.864	Mus_musculus
ENSMMOG00000001167	polr2eb	88	85.864	MGP_PahariEiJ_G0030974	Polr2e	91	85.864	Mus_pahari
ENSMMOG00000001167	polr2eb	88	85.864	MGP_SPRETEiJ_G0016379	Polr2e	91	85.864	Mus_spretus
ENSMMOG00000001167	polr2eb	88	85.340	ENSMPUG00000008953	POLR2E	91	85.340	Mustela_putorius_furo
ENSMMOG00000001167	polr2eb	55	82.353	ENSMLUG00000006376	-	88	72.727	Myotis_lucifugus
ENSMMOG00000001167	polr2eb	88	86.387	ENSMLUG00000013193	POLR2E	91	86.387	Myotis_lucifugus
ENSMMOG00000001167	polr2eb	88	85.864	ENSNGAG00000001147	Polr2e	91	85.864	Nannospalax_galili
ENSMMOG00000001167	polr2eb	77	65.868	ENSNGAG00000017344	-	88	65.868	Nannospalax_galili
ENSMMOG00000001167	polr2eb	88	74.869	ENSNBRG00000022772	polr2eb	90	74.869	Neolamprologus_brichardi
ENSMMOG00000001167	polr2eb	88	82.383	ENSNLEG00000001207	-	91	82.383	Nomascus_leucogenys
ENSMMOG00000001167	polr2eb	88	63.351	ENSNLEG00000031364	-	90	63.351	Nomascus_leucogenys
ENSMMOG00000001167	polr2eb	88	74.869	ENSOPRG00000008331	POLR2E	91	74.869	Ochotona_princeps
ENSMMOG00000001167	polr2eb	88	62.304	ENSODEG00000011490	-	89	62.304	Octodon_degus
ENSMMOG00000001167	polr2eb	88	86.387	ENSODEG00000013230	-	91	86.387	Octodon_degus
ENSMMOG00000001167	polr2eb	77	76.647	ENSODEG00000007985	-	89	76.647	Octodon_degus
ENSMMOG00000001167	polr2eb	88	88.482	ENSONIG00000002519	polr2eb	91	88.482	Oreochromis_niloticus
ENSMMOG00000001167	polr2eb	88	88.482	ENSORLG00000015346	polr2eb	91	88.482	Oryzias_latipes
ENSMMOG00000001167	polr2eb	88	88.482	ENSORLG00020020700	polr2e	91	88.482	Oryzias_latipes_hni
ENSMMOG00000001167	polr2eb	88	88.482	ENSORLG00015016842	polr2e	91	88.482	Oryzias_latipes_hsok
ENSMMOG00000001167	polr2eb	88	89.005	ENSOMEG00000002709	polr2eb	91	89.005	Oryzias_melastigma
ENSMMOG00000001167	polr2eb	88	86.387	ENSOGAG00000012311	POLR2E	91	86.387	Otolemur_garnettii
ENSMMOG00000001167	polr2eb	88	86.387	ENSOARG00000010994	POLR2E	91	86.387	Ovis_aries
ENSMMOG00000001167	polr2eb	91	84.343	ENSPPAG00000003145	POLR2E	100	86.387	Pan_paniscus
ENSMMOG00000001167	polr2eb	88	85.864	ENSPPRG00000000777	POLR2E	91	85.864	Panthera_pardus
ENSMMOG00000001167	polr2eb	88	65.263	ENSPTIG00000012237	POLR2E	95	85.034	Panthera_tigris_altaica
ENSMMOG00000001167	polr2eb	91	84.343	ENSPTRG00000010183	POLR2E	99	84.343	Pan_troglodytes
ENSMMOG00000001167	polr2eb	88	86.387	ENSPANG00000018011	POLR2E	91	86.387	Papio_anubis
ENSMMOG00000001167	polr2eb	88	87.958	ENSPKIG00000024123	POLR2E	91	87.958	Paramormyrops_kingsleyae
ENSMMOG00000001167	polr2eb	88	89.005	ENSPKIG00000009607	POLR2E	91	89.005	Paramormyrops_kingsleyae
ENSMMOG00000001167	polr2eb	97	80.569	ENSPSIG00000002870	POLR2E	96	80.569	Pelodiscus_sinensis
ENSMMOG00000001167	polr2eb	88	75.393	ENSPMGG00000014354	polr2eb	90	75.393	Periophthalmus_magnuspinnatus
ENSMMOG00000001167	polr2eb	88	85.864	ENSPEMG00000023261	Polr2e	91	85.864	Peromyscus_maniculatus_bairdii
ENSMMOG00000001167	polr2eb	78	86.471	ENSPCIG00000007312	POLR2E	67	86.471	Phascolarctos_cinereus
ENSMMOG00000001167	polr2eb	88	88.482	ENSPFOG00000005734	polr2eb	91	88.482	Poecilia_formosa
ENSMMOG00000001167	polr2eb	88	88.482	ENSPLAG00000014496	polr2eb	91	88.482	Poecilia_latipinna
ENSMMOG00000001167	polr2eb	88	88.482	ENSPMEG00000008053	polr2eb	91	88.482	Poecilia_mexicana
ENSMMOG00000001167	polr2eb	88	88.482	ENSPREG00000006489	polr2eb	91	88.482	Poecilia_reticulata
ENSMMOG00000001167	polr2eb	88	80.729	ENSPPYG00000009305	POLR2E	91	80.729	Pongo_abelii
ENSMMOG00000001167	polr2eb	51	82.883	ENSPCAG00000016605	POLR2E	100	82.883	Procavia_capensis
ENSMMOG00000001167	polr2eb	90	84.694	ENSPCOG00000014491	POLR2E	98	84.694	Propithecus_coquereli
ENSMMOG00000001167	polr2eb	79	88.304	ENSPNYG00000019797	polr2eb	86	88.304	Pundamilia_nyererei
ENSMMOG00000001167	polr2eb	88	87.958	ENSPNAG00000026263	POLR2E	91	87.958	Pygocentrus_nattereri
ENSMMOG00000001167	polr2eb	92	84.000	ENSRNOG00000013545	Polr2e	98	84.000	Rattus_norvegicus
ENSMMOG00000001167	polr2eb	88	62.500	ENSRBIG00000027259	-	90	62.500	Rhinopithecus_bieti
ENSMMOG00000001167	polr2eb	88	86.387	ENSRBIG00000028726	-	91	86.387	Rhinopithecus_bieti
ENSMMOG00000001167	polr2eb	90	84.694	ENSRROG00000043763	POLR2E	94	84.694	Rhinopithecus_roxellana
ENSMMOG00000001167	polr2eb	86	43.367	YBR154C	RPB5	88	43.367	Saccharomyces_cerevisiae
ENSMMOG00000001167	polr2eb	88	86.387	ENSSBOG00000027241	POLR2E	95	86.387	Saimiri_boliviensis_boliviensis
ENSMMOG00000001167	polr2eb	88	86.911	ENSSHAG00000010690	POLR2E	91	86.911	Sarcophilus_harrisii
ENSMMOG00000001167	polr2eb	88	89.005	ENSSFOG00015006073	polr2e	91	89.005	Scleropages_formosus
ENSMMOG00000001167	polr2eb	88	89.005	ENSSMAG00000012782	polr2eb	91	89.005	Scophthalmus_maximus
ENSMMOG00000001167	polr2eb	88	89.005	ENSSDUG00000003352	polr2eb	91	89.005	Seriola_dumerili
ENSMMOG00000001167	polr2eb	88	89.005	ENSSLDG00000004965	polr2eb	91	89.005	Seriola_lalandi_dorsalis
ENSMMOG00000001167	polr2eb	88	86.911	ENSSPUG00000006114	POLR2E	91	86.911	Sphenodon_punctatus
ENSMMOG00000001167	polr2eb	88	89.005	ENSSPAG00000017556	polr2eb	91	89.005	Stegastes_partitus
ENSMMOG00000001167	polr2eb	88	86.387	ENSSSCG00000021472	POLR2E	91	86.387	Sus_scrofa
ENSMMOG00000001167	polr2eb	55	78.512	ENSTGUG00000000922	POLR2E	85	78.512	Taeniopygia_guttata
ENSMMOG00000001167	polr2eb	88	89.005	ENSTRUG00000018238	polr2eb	78	89.005	Takifugu_rubripes
ENSMMOG00000001167	polr2eb	88	89.005	ENSTNIG00000013187	polr2eb	91	89.005	Tetraodon_nigroviridis
ENSMMOG00000001167	polr2eb	88	86.387	ENSTTRG00000001484	POLR2E	91	86.387	Tursiops_truncatus
ENSMMOG00000001167	polr2eb	82	82.022	ENSUAMG00000009166	POLR2E	90	72.251	Ursus_americanus
ENSMMOG00000001167	polr2eb	88	87.435	ENSXETG00000003291	polr2e	91	87.435	Xenopus_tropicalis
ENSMMOG00000001167	polr2eb	88	74.869	ENSXCOG00000009197	polr2eb	90	74.869	Xiphophorus_couchianus
ENSMMOG00000001167	polr2eb	88	88.482	ENSXMAG00000026495	polr2eb	91	88.482	Xiphophorus_maculatus