EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000001795 (Gene tree)
Gene ID: -
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 169058 bases
Position: chrKV751334.1:19461590-19630647
Accession: ZDB-GENE-030131-3124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000002189	TUDOR	PF00567.24	1.6e-26	1	1
ENSMMOP00000002189	SNase	PF00565.17	3.8e-67	1	4
ENSMMOP00000002189	SNase	PF00565.17	3.8e-67	2	4
ENSMMOP00000002189	SNase	PF00565.17	3.8e-67	3	4
ENSMMOP00000002189	SNase	PF00565.17	3.8e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000002227	-	2736	-	ENSMMOP00000002189	911 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000001795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000001795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000001795	snd1	99	84.093	ENSG00000197157	SND1	100	83.224	Homo_sapiens
ENSMMOG00000001795	snd1	100	95.719	ENSAPOG00000017599	snd1	100	95.719	Acanthochromis_polyacanthus
ENSMMOG00000001795	snd1	100	83.260	ENSAMEG00000004664	SND1	94	83.260	Ailuropoda_melanoleuca
ENSMMOG00000001795	snd1	100	91.548	ENSACIG00000003551	snd1	100	91.548	Amphilophus_citrinellus
ENSMMOG00000001795	snd1	100	96.158	ENSAOCG00000014166	snd1	100	96.158	Amphiprion_ocellaris
ENSMMOG00000001795	snd1	100	95.939	ENSAPEG00000007067	snd1	100	95.939	Amphiprion_percula
ENSMMOG00000001795	snd1	98	94.966	ENSATEG00000018475	snd1	89	94.966	Anabas_testudineus
ENSMMOG00000001795	snd1	99	84.205	ENSANAG00000034463	SND1	99	84.424	Aotus_nancymaae
ENSMMOG00000001795	snd1	100	93.633	ENSACLG00000022897	snd1	100	93.633	Astatotilapia_calliptera
ENSMMOG00000001795	snd1	99	89.780	ENSAMXG00000016318	snd1	99	89.780	Astyanax_mexicanus
ENSMMOG00000001795	snd1	99	84.427	ENSBTAG00000010692	SND1	100	83.553	Bos_taurus
ENSMMOG00000001795	snd1	99	46.595	WBGene00006626	tsn-1	99	46.595	Caenorhabditis_elegans
ENSMMOG00000001795	snd1	99	83.982	ENSCJAG00000017668	SND1	99	84.199	Callithrix_jacchus
ENSMMOG00000001795	snd1	100	83.553	ENSCAFG00000001700	SND1	100	83.553	Canis_familiaris
ENSMMOG00000001795	snd1	100	83.553	ENSCAFG00020021639	SND1	100	83.553	Canis_lupus_dingo
ENSMMOG00000001795	snd1	99	84.316	ENSCHIG00000023390	SND1	100	83.443	Capra_hircus
ENSMMOG00000001795	snd1	70	87.018	ENSTSYG00000004979	SND1	96	87.018	Carlito_syrichta
ENSMMOG00000001795	snd1	97	74.324	ENSCAPG00000010677	SND1	97	73.690	Cavia_aperea
ENSMMOG00000001795	snd1	99	84.093	ENSCPOG00000006251	SND1	100	83.224	Cavia_porcellus
ENSMMOG00000001795	snd1	99	84.205	ENSCCAG00000036847	SND1	100	83.333	Cebus_capucinus
ENSMMOG00000001795	snd1	99	84.316	ENSCATG00000035214	SND1	99	84.537	Cercocebus_atys
ENSMMOG00000001795	snd1	99	84.316	ENSCLAG00000011796	SND1	100	83.443	Chinchilla_lanigera
ENSMMOG00000001795	snd1	99	84.316	ENSCSAG00000010182	SND1	100	83.443	Chlorocebus_sabaeus
ENSMMOG00000001795	snd1	78	73.529	ENSCHOG00000002218	SND1	86	73.529	Choloepus_hoffmanni
ENSMMOG00000001795	snd1	100	83.205	ENSCPBG00000018094	SND1	100	83.205	Chrysemys_picta_bellii
ENSMMOG00000001795	snd1	98	56.589	ENSCING00000000524	-	99	55.917	Ciona_intestinalis
ENSMMOG00000001795	snd1	99	57.205	ENSCSAVG00000008807	-	99	57.002	Ciona_savignyi
ENSMMOG00000001795	snd1	99	84.316	ENSCANG00000035119	SND1	100	83.443	Colobus_angolensis_palliatus
ENSMMOG00000001795	snd1	99	84.093	ENSCGRG00001022514	Snd1	100	83.224	Cricetulus_griseus_chok1gshd
ENSMMOG00000001795	snd1	97	84.312	ENSCGRG00000012277	Snd1	99	84.312	Cricetulus_griseus_crigri
ENSMMOG00000001795	snd1	100	92.536	ENSCSEG00000008661	snd1	100	92.536	Cynoglossus_semilaevis
ENSMMOG00000001795	snd1	100	93.853	ENSCVAG00000010316	snd1	100	93.853	Cyprinodon_variegatus
ENSMMOG00000001795	snd1	100	89.376	ENSDARG00000006766	snd1	100	89.376	Danio_rerio
ENSMMOG00000001795	snd1	97	82.677	ENSDNOG00000006795	SND1	100	82.677	Dasypus_novemcinctus
ENSMMOG00000001795	snd1	99	84.093	ENSDORG00000000336	Snd1	100	83.224	Dipodomys_ordii
ENSMMOG00000001795	snd1	98	49.837	FBgn0035121	Tudor-SN	99	49.358	Drosophila_melanogaster
ENSMMOG00000001795	snd1	90	88.889	ENSETEG00000000375	SND1	92	88.889	Echinops_telfairi
ENSMMOG00000001795	snd1	60	66.757	ENSEBUG00000014201	-	84	76.087	Eptatretus_burgeri
ENSMMOG00000001795	snd1	99	82.932	ENSEASG00005008513	SND1	100	82.093	Equus_asinus_asinus
ENSMMOG00000001795	snd1	99	84.093	ENSECAG00000011451	SND1	100	83.114	Equus_caballus
ENSMMOG00000001795	snd1	100	73.904	ENSEEUG00000014737	SND1	100	73.904	Erinaceus_europaeus
ENSMMOG00000001795	snd1	99	89.133	ENSELUG00000001805	snd1	96	89.133	Esox_lucius
ENSMMOG00000001795	snd1	100	83.443	ENSFCAG00000008289	SND1	100	83.443	Felis_catus
ENSMMOG00000001795	snd1	98	84.116	ENSFDAG00000015881	SND1	100	83.004	Fukomys_damarensis
ENSMMOG00000001795	snd1	100	91.407	ENSFHEG00000004093	snd1	99	92.833	Fundulus_heteroclitus
ENSMMOG00000001795	snd1	75	83.898	ENSGMOG00000018932	snd1	66	83.898	Gadus_morhua
ENSMMOG00000001795	snd1	100	94.731	ENSGAFG00000008421	snd1	100	94.731	Gambusia_affinis
ENSMMOG00000001795	snd1	100	61.346	ENSGACG00000019793	snd1	100	61.346	Gasterosteus_aculeatus
ENSMMOG00000001795	snd1	99	84.316	ENSGGOG00000009614	SND1	99	84.537	Gorilla_gorilla
ENSMMOG00000001795	snd1	100	93.853	ENSHBUG00000019135	snd1	100	93.853	Haplochromis_burtoni
ENSMMOG00000001795	snd1	99	83.871	ENSHGLG00000003618	SND1	100	83.004	Heterocephalus_glaber_female
ENSMMOG00000001795	snd1	99	83.352	ENSHGLG00100012449	SND1	100	83.352	Heterocephalus_glaber_male
ENSMMOG00000001795	snd1	100	92.206	ENSHCOG00000005266	snd1	100	92.206	Hippocampus_comes
ENSMMOG00000001795	snd1	99	89.133	ENSIPUG00000013279	snd1	99	89.133	Ictalurus_punctatus
ENSMMOG00000001795	snd1	99	84.093	ENSSTOG00000002140	SND1	100	83.224	Ictidomys_tridecemlineatus
ENSMMOG00000001795	snd1	99	84.316	ENSJJAG00000009561	Snd1	100	83.443	Jaculus_jaculus
ENSMMOG00000001795	snd1	100	94.512	ENSKMAG00000016997	snd1	100	94.512	Kryptolebias_marmoratus
ENSMMOG00000001795	snd1	100	94.512	ENSLBEG00000013563	snd1	100	94.512	Labrus_bergylta
ENSMMOG00000001795	snd1	99	87.982	ENSLOCG00000015537	snd1	99	87.160	Lepisosteus_oculatus
ENSMMOG00000001795	snd1	100	83.662	ENSLAFG00000009696	SND1	100	83.662	Loxodonta_africana
ENSMMOG00000001795	snd1	99	84.316	ENSMFAG00000038114	SND1	99	84.537	Macaca_fascicularis
ENSMMOG00000001795	snd1	99	84.316	ENSMMUG00000015432	SND1	100	83.443	Macaca_mulatta
ENSMMOG00000001795	snd1	99	84.316	ENSMNEG00000039808	SND1	100	84.555	Macaca_nemestrina
ENSMMOG00000001795	snd1	99	84.205	ENSMLEG00000029040	SND1	100	84.442	Mandrillus_leucophaeus
ENSMMOG00000001795	snd1	100	94.182	ENSMAMG00000011739	snd1	100	94.182	Mastacembelus_armatus
ENSMMOG00000001795	snd1	100	93.633	ENSMZEG00005005681	snd1	100	93.633	Maylandia_zebra
ENSMMOG00000001795	snd1	99	84.205	ENSMICG00000000097	SND1	100	83.333	Microcebus_murinus
ENSMMOG00000001795	snd1	99	84.538	ENSMOCG00000005040	Snd1	100	83.662	Microtus_ochrogaster
ENSMMOG00000001795	snd1	99	83.537	ENSMODG00000015182	SND1	100	82.675	Monodelphis_domestica
ENSMMOG00000001795	snd1	100	94.731	ENSMALG00000012071	snd1	100	94.731	Monopterus_albus
ENSMMOG00000001795	snd1	98	84.340	MGP_CAROLIEiJ_G0028159	Snd1	99	85.042	Mus_caroli
ENSMMOG00000001795	snd1	98	84.116	ENSMUSG00000001424	Snd1	100	83.114	Mus_musculus
ENSMMOG00000001795	snd1	98	84.340	MGP_PahariEiJ_G0021917	Snd1	100	85.042	Mus_pahari
ENSMMOG00000001795	snd1	98	84.340	MGP_SPRETEiJ_G0029159	Snd1	100	83.333	Mus_spretus
ENSMMOG00000001795	snd1	100	83.333	ENSMPUG00000006545	SND1	100	82.895	Mustela_putorius_furo
ENSMMOG00000001795	snd1	97	83.278	ENSMLUG00000017130	SND1	99	82.609	Myotis_lucifugus
ENSMMOG00000001795	snd1	99	84.205	ENSNGAG00000011186	Snd1	100	83.333	Nannospalax_galili
ENSMMOG00000001795	snd1	100	93.853	ENSNBRG00000006681	snd1	100	93.853	Neolamprologus_brichardi
ENSMMOG00000001795	snd1	100	83.443	ENSNLEG00000012263	SND1	100	84.555	Nomascus_leucogenys
ENSMMOG00000001795	snd1	91	88.889	ENSOPRG00000013405	SND1	92	88.889	Ochotona_princeps
ENSMMOG00000001795	snd1	99	84.316	ENSODEG00000011502	SND1	100	83.772	Octodon_degus
ENSMMOG00000001795	snd1	100	94.182	ENSONIG00000011481	snd1	97	94.182	Oreochromis_niloticus
ENSMMOG00000001795	snd1	98	83.258	ENSOANG00000000817	SND1	98	83.258	Ornithorhynchus_anatinus
ENSMMOG00000001795	snd1	100	82.675	ENSOCUG00000001620	SND1	100	82.675	Oryctolagus_cuniculus
ENSMMOG00000001795	snd1	100	93.414	ENSORLG00000015201	snd1	100	93.414	Oryzias_latipes
ENSMMOG00000001795	snd1	100	93.633	ENSORLG00020013991	snd1	100	93.633	Oryzias_latipes_hni
ENSMMOG00000001795	snd1	100	93.633	ENSORLG00015012436	snd1	100	93.633	Oryzias_latipes_hsok
ENSMMOG00000001795	snd1	100	93.633	ENSOMEG00000006406	snd1	100	93.633	Oryzias_melastigma
ENSMMOG00000001795	snd1	99	84.129	ENSOGAG00000013356	SND1	94	83.260	Otolemur_garnettii
ENSMMOG00000001795	snd1	97	82.187	ENSOARG00000002149	SND1	100	82.187	Ovis_aries
ENSMMOG00000001795	snd1	99	84.205	ENSPPAG00000042947	SND1	99	84.424	Pan_paniscus
ENSMMOG00000001795	snd1	100	83.443	ENSPPRG00000004494	SND1	100	83.443	Panthera_pardus
ENSMMOG00000001795	snd1	100	83.333	ENSPTIG00000014214	SND1	100	83.333	Panthera_tigris_altaica
ENSMMOG00000001795	snd1	99	84.205	ENSPTRG00000023911	SND1	99	84.424	Pan_troglodytes
ENSMMOG00000001795	snd1	97	84.537	ENSPANG00000011997	SND1	99	84.537	Papio_anubis
ENSMMOG00000001795	snd1	98	86.394	ENSPKIG00000023494	snd1	99	85.605	Paramormyrops_kingsleyae
ENSMMOG00000001795	snd1	92	93.660	ENSPMGG00000003629	snd1	100	93.660	Periophthalmus_magnuspinnatus
ENSMMOG00000001795	snd1	99	84.316	ENSPEMG00000010240	Snd1	100	83.443	Peromyscus_maniculatus_bairdii
ENSMMOG00000001795	snd1	97	74.153	ENSPMAG00000007915	-	99	74.041	Petromyzon_marinus
ENSMMOG00000001795	snd1	99	84.093	ENSPCIG00000011561	SND1	100	83.224	Phascolarctos_cinereus
ENSMMOG00000001795	snd1	100	94.182	ENSPFOG00000001557	snd1	100	94.182	Poecilia_formosa
ENSMMOG00000001795	snd1	100	94.182	ENSPLAG00000018459	snd1	97	94.182	Poecilia_latipinna
ENSMMOG00000001795	snd1	100	94.621	ENSPMEG00000006803	snd1	100	94.621	Poecilia_mexicana
ENSMMOG00000001795	snd1	100	94.292	ENSPREG00000002189	snd1	100	94.292	Poecilia_reticulata
ENSMMOG00000001795	snd1	91	88.889	ENSPPYG00000017972	SND1	100	88.889	Pongo_abelii
ENSMMOG00000001795	snd1	100	73.684	ENSPCAG00000011305	SND1	100	73.684	Procavia_capensis
ENSMMOG00000001795	snd1	99	84.316	ENSPCOG00000026791	SND1	100	84.555	Propithecus_coquereli
ENSMMOG00000001795	snd1	99	82.091	ENSPVAG00000013945	SND1	100	81.250	Pteropus_vampyrus
ENSMMOG00000001795	snd1	100	93.524	ENSPNYG00000000932	snd1	100	93.524	Pundamilia_nyererei
ENSMMOG00000001795	snd1	99	90.330	ENSPNAG00000001206	snd1	99	90.330	Pygocentrus_nattereri
ENSMMOG00000001795	snd1	98	84.228	ENSRNOG00000031173	Snd1	100	83.315	Rattus_norvegicus
ENSMMOG00000001795	snd1	70	87.640	ENSRBIG00000027782	-	93	87.689	Rhinopithecus_bieti
ENSMMOG00000001795	snd1	99	84.316	ENSRROG00000033020	SND1	100	83.443	Rhinopithecus_roxellana
ENSMMOG00000001795	snd1	99	84.205	ENSSBOG00000032461	SND1	99	84.424	Saimiri_boliviensis_boliviensis
ENSMMOG00000001795	snd1	98	80.899	ENSSHAG00000015359	SND1	100	80.899	Sarcophilus_harrisii
ENSMMOG00000001795	snd1	98	88.470	ENSSFOG00015001103	snd1	99	87.582	Scleropages_formosus
ENSMMOG00000001795	snd1	100	94.292	ENSSMAG00000001932	snd1	95	94.292	Scophthalmus_maximus
ENSMMOG00000001795	snd1	100	95.719	ENSSDUG00000002699	snd1	94	95.719	Seriola_dumerili
ENSMMOG00000001795	snd1	100	88.255	ENSSLDG00000001950	snd1	100	88.255	Seriola_lalandi_dorsalis
ENSMMOG00000001795	snd1	86	80.118	ENSSARG00000004877	SND1	92	80.118	Sorex_araneus
ENSMMOG00000001795	snd1	72	78.114	ENSSPUG00000017586	SND1	96	79.723	Sphenodon_punctatus
ENSMMOG00000001795	snd1	73	95.431	ENSSPAG00000021398	snd1	99	95.431	Stegastes_partitus
ENSMMOG00000001795	snd1	99	83.982	ENSSSCG00000016590	SND1	100	83.114	Sus_scrofa
ENSMMOG00000001795	snd1	100	93.289	ENSTRUG00000014067	snd1	100	97.222	Takifugu_rubripes
ENSMMOG00000001795	snd1	100	92.645	ENSTNIG00000011019	snd1	100	92.645	Tetraodon_nigroviridis
ENSMMOG00000001795	snd1	93	78.706	ENSTBEG00000003999	SND1	100	78.706	Tupaia_belangeri
ENSMMOG00000001795	snd1	99	79.978	ENSTTRG00000006059	SND1	100	79.167	Tursiops_truncatus
ENSMMOG00000001795	snd1	69	76.501	ENSUAMG00000002820	-	89	76.501	Ursus_americanus
ENSMMOG00000001795	snd1	87	83.460	ENSUAMG00000005604	-	93	83.460	Ursus_americanus
ENSMMOG00000001795	snd1	100	83.443	ENSUMAG00000005960	SND1	100	83.443	Ursus_maritimus
ENSMMOG00000001795	snd1	77	88.889	ENSVPAG00000008302	SND1	74	88.889	Vicugna_pacos
ENSMMOG00000001795	snd1	100	83.443	ENSVVUG00000007226	SND1	100	83.443	Vulpes_vulpes
ENSMMOG00000001795	snd1	97	80.158	ENSXETG00000023043	snd1	100	80.023	Xenopus_tropicalis
ENSMMOG00000001795	snd1	92	92.280	ENSXCOG00000013629	snd1	99	92.280	Xiphophorus_couchianus
ENSMMOG00000001795	snd1	100	95.170	ENSXMAG00000011469	snd1	100	95.170	Xiphophorus_maculatus