EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000001813 (Gene tree)
Gene ID: -
Gene Symbol: cpsf4
Alias: nar|no arches
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 4492 bases
Position: chrKV751361.1:2989753-2994244
Accession: ZDB-GENE-990415-180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000003167	zf-CCCH	PF00642.24	3e-20	1	2
ENSMMOP00000003167	zf-CCCH	PF00642.24	3e-20	2	2
ENSMMOP00000002254	zf-CCCH	PF00642.24	1.2e-16	1	1
ENSMMOP00000003272	zf-CCCH	PF00642.24	1.6e-15	1	2
ENSMMOP00000003272	zf-CCCH	PF00642.24	1.6e-15	2	2
ENSMMOP00000003272	zf-CCHC	PF00098.23	2.7e-06	1	1
ENSMMOP00000003167	zf-CCHC	PF00098.23	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000003324	-	606	-	ENSMMOP00000003272	201 (aa)	-	-
ENSMMOT00000003217	-	801	-	ENSMMOP00000003167	266 (aa)	-	-
ENSMMOT00000002295	-	507	-	ENSMMOP00000002254	168 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000001813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000001813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000001813	cpsf4	100	85.308	ENSG00000160917	CPSF4	100	98.214	Homo_sapiens
ENSMMOG00000001813	cpsf4	67	85.955	ENSAPOG00000004921	cpsf4	100	85.955	Acanthochromis_polyacanthus
ENSMMOG00000001813	cpsf4	100	83.704	ENSAMEG00000006252	CPSF4	100	83.704	Ailuropoda_melanoleuca
ENSMMOG00000001813	cpsf4	100	84.962	ENSACIG00000009248	cpsf4	100	85.714	Amphilophus_citrinellus
ENSMMOG00000001813	cpsf4	100	93.233	ENSAOCG00000019616	cpsf4	100	93.233	Amphiprion_ocellaris
ENSMMOG00000001813	cpsf4	100	93.233	ENSAPEG00000011679	cpsf4	100	93.233	Amphiprion_percula
ENSMMOG00000001813	cpsf4	100	93.258	ENSATEG00000007010	cpsf4	100	93.258	Anabas_testudineus
ENSMMOG00000001813	cpsf4	100	81.852	ENSACAG00000012941	CPSF4	89	81.852	Anolis_carolinensis
ENSMMOG00000001813	cpsf4	100	85.308	ENSANAG00000021360	CPSF4	100	85.308	Aotus_nancymaae
ENSMMOG00000001813	cpsf4	100	91.729	ENSACLG00000010374	cpsf4	100	91.729	Astatotilapia_calliptera
ENSMMOG00000001813	cpsf4	100	90.547	ENSAMXG00000031647	cpsf4	100	90.547	Astyanax_mexicanus
ENSMMOG00000001813	cpsf4	95	87.879	ENSBTAG00000002090	CPSF4	100	80.075	Bos_taurus
ENSMMOG00000001813	cpsf4	100	85.308	ENSCJAG00000015826	CPSF4	100	85.308	Callithrix_jacchus
ENSMMOG00000001813	cpsf4	100	84.434	ENSCAFG00000015036	CPSF4	100	87.195	Canis_familiaris
ENSMMOG00000001813	cpsf4	95	89.308	ENSCAFG00020014462	CPSF4	100	79.259	Canis_lupus_dingo
ENSMMOG00000001813	cpsf4	100	85.308	ENSCHIG00000014313	CPSF4	100	85.308	Capra_hircus
ENSMMOG00000001813	cpsf4	95	78.788	ENSTSYG00000014604	-	100	75.587	Carlito_syrichta
ENSMMOG00000001813	cpsf4	89	75.210	ENSTSYG00000008195	-	100	77.901	Carlito_syrichta
ENSMMOG00000001813	cpsf4	100	85.308	ENSTSYG00000005712	-	100	85.308	Carlito_syrichta
ENSMMOG00000001813	cpsf4	68	98.246	ENSCAPG00000013881	CPSF4	87	83.710	Cavia_aperea
ENSMMOG00000001813	cpsf4	100	84.834	ENSCPOG00000001783	CPSF4	100	84.834	Cavia_porcellus
ENSMMOG00000001813	cpsf4	100	85.308	ENSCCAG00000028291	CPSF4	100	85.308	Cebus_capucinus
ENSMMOG00000001813	cpsf4	100	85.308	ENSCATG00000038440	CPSF4	100	85.308	Cercocebus_atys
ENSMMOG00000001813	cpsf4	100	85.308	ENSCLAG00000007050	CPSF4	100	85.308	Chinchilla_lanigera
ENSMMOG00000001813	cpsf4	100	83.704	ENSCSAG00000017795	CPSF4	100	83.704	Chlorocebus_sabaeus
ENSMMOG00000001813	cpsf4	95	73.494	ENSCPBG00000010269	-	100	77.108	Chrysemys_picta_bellii
ENSMMOG00000001813	cpsf4	67	97.321	ENSCPBG00000020869	CPSF4	100	83.410	Chrysemys_picta_bellii
ENSMMOG00000001813	cpsf4	95	67.470	ENSCING00000021080	-	97	56.705	Ciona_intestinalis
ENSMMOG00000001813	cpsf4	95	67.879	ENSCSAVG00000011469	-	97	54.064	Ciona_savignyi
ENSMMOG00000001813	cpsf4	100	85.308	ENSCANG00000019384	CPSF4	100	85.308	Colobus_angolensis_palliatus
ENSMMOG00000001813	cpsf4	100	84.834	ENSCGRG00001024184	Cpsf4	100	84.834	Cricetulus_griseus_chok1gshd
ENSMMOG00000001813	cpsf4	100	84.834	ENSCGRG00000013892	Cpsf4	100	84.834	Cricetulus_griseus_crigri
ENSMMOG00000001813	cpsf4	100	91.353	ENSCSEG00000019055	cpsf4	100	91.353	Cynoglossus_semilaevis
ENSMMOG00000001813	cpsf4	100	90.226	ENSCVAG00000016528	cpsf4	100	90.226	Cyprinodon_variegatus
ENSMMOG00000001813	cpsf4	100	84.191	ENSDARG00000020217	cpsf4	100	84.191	Danio_rerio
ENSMMOG00000001813	cpsf4	100	83.704	ENSDNOG00000006344	CPSF4	100	83.704	Dasypus_novemcinctus
ENSMMOG00000001813	cpsf4	67	97.345	ENSDORG00000000742	Cpsf4	100	83.486	Dipodomys_ordii
ENSMMOG00000001813	cpsf4	99	63.429	FBgn0015621	Clp	99	53.767	Drosophila_melanogaster
ENSMMOG00000001813	cpsf4	95	86.667	ENSETEG00000002608	CPSF4	70	95.455	Echinops_telfairi
ENSMMOG00000001813	cpsf4	95	75.904	ENSEBUG00000012552	cpsf4	98	65.152	Eptatretus_burgeri
ENSMMOG00000001813	cpsf4	95	87.879	ENSEASG00005002487	CPSF4	100	80.075	Equus_asinus_asinus
ENSMMOG00000001813	cpsf4	100	84.834	ENSECAG00000007525	CPSF4	100	84.834	Equus_caballus
ENSMMOG00000001813	cpsf4	67	94.030	ENSEEUG00000002158	CPSF4	73	94.030	Erinaceus_europaeus
ENSMMOG00000001813	cpsf4	100	84.926	ENSELUG00000011481	cpsf4	100	84.926	Esox_lucius
ENSMMOG00000001813	cpsf4	100	84.834	ENSFCAG00000015070	CPSF4	100	84.834	Felis_catus
ENSMMOG00000001813	cpsf4	95	57.831	ENSFALG00000012906	-	100	57.831	Ficedula_albicollis
ENSMMOG00000001813	cpsf4	95	86.061	ENSFALG00000013799	CPSF4	100	79.323	Ficedula_albicollis
ENSMMOG00000001813	cpsf4	90	83.197	ENSFDAG00000014092	CPSF4	100	84.324	Fukomys_damarensis
ENSMMOG00000001813	cpsf4	100	90.226	ENSFHEG00000010880	cpsf4	100	90.226	Fundulus_heteroclitus
ENSMMOG00000001813	cpsf4	100	83.824	ENSGMOG00000002330	cpsf4	100	83.824	Gadus_morhua
ENSMMOG00000001813	cpsf4	95	85.455	ENSGALG00000004714	CPSF4	100	79.699	Gallus_gallus
ENSMMOG00000001813	cpsf4	99	48.315	ENSGALG00000004441	-	98	30.435	Gallus_gallus
ENSMMOG00000001813	cpsf4	100	89.850	ENSGAFG00000010580	cpsf4	100	89.850	Gambusia_affinis
ENSMMOG00000001813	cpsf4	100	87.687	ENSGACG00000007792	cpsf4	100	87.687	Gasterosteus_aculeatus
ENSMMOG00000001813	cpsf4	95	73.333	ENSGAGG00000020579	-	100	74.176	Gopherus_agassizii
ENSMMOG00000001813	cpsf4	100	83.704	ENSGAGG00000021835	CPSF4	100	83.704	Gopherus_agassizii
ENSMMOG00000001813	cpsf4	100	85.308	ENSGGOG00000015131	CPSF4	100	85.308	Gorilla_gorilla
ENSMMOG00000001813	cpsf4	100	91.729	ENSHBUG00000013699	cpsf4	100	91.729	Haplochromis_burtoni
ENSMMOG00000001813	cpsf4	100	83.395	ENSHGLG00000017150	CPSF4	100	84.360	Heterocephalus_glaber_female
ENSMMOG00000001813	cpsf4	100	68.657	ENSHGLG00100017302	-	100	68.657	Heterocephalus_glaber_male
ENSMMOG00000001813	cpsf4	87	81.356	ENSHGLG00100009215	-	100	81.818	Heterocephalus_glaber_male
ENSMMOG00000001813	cpsf4	100	89.098	ENSHCOG00000004397	cpsf4	100	89.098	Hippocampus_comes
ENSMMOG00000001813	cpsf4	100	83.824	ENSIPUG00000017147	cpsf4	100	84.926	Ictalurus_punctatus
ENSMMOG00000001813	cpsf4	100	84.834	ENSSTOG00000001688	CPSF4	100	84.834	Ictidomys_tridecemlineatus
ENSMMOG00000001813	cpsf4	100	85.308	ENSJJAG00000019426	Cpsf4	100	85.308	Jaculus_jaculus
ENSMMOG00000001813	cpsf4	100	88.722	ENSKMAG00000015642	cpsf4	100	88.722	Kryptolebias_marmoratus
ENSMMOG00000001813	cpsf4	95	71.084	ENSLACG00000018470	-	100	58.801	Latimeria_chalumnae
ENSMMOG00000001813	cpsf4	100	83.395	ENSLACG00000010938	CPSF4	100	83.395	Latimeria_chalumnae
ENSMMOG00000001813	cpsf4	100	82.900	ENSLOCG00000004814	cpsf4	100	82.900	Lepisosteus_oculatus
ENSMMOG00000001813	cpsf4	100	84.074	ENSLAFG00000000159	CPSF4	100	85.714	Loxodonta_africana
ENSMMOG00000001813	cpsf4	100	85.308	ENSMFAG00000001462	CPSF4	100	85.308	Macaca_fascicularis
ENSMMOG00000001813	cpsf4	100	85.308	ENSMMUG00000019191	CPSF4	100	85.308	Macaca_mulatta
ENSMMOG00000001813	cpsf4	100	85.308	ENSMNEG00000032306	CPSF4	100	85.308	Macaca_nemestrina
ENSMMOG00000001813	cpsf4	100	85.308	ENSMLEG00000034721	CPSF4	100	85.308	Mandrillus_leucophaeus
ENSMMOG00000001813	cpsf4	100	93.233	ENSMAMG00000006244	cpsf4	100	93.233	Mastacembelus_armatus
ENSMMOG00000001813	cpsf4	100	91.729	ENSMZEG00005007515	cpsf4	100	91.729	Maylandia_zebra
ENSMMOG00000001813	cpsf4	87	78.879	ENSMGAG00000004235	CPSF4	100	78.879	Meleagris_gallopavo
ENSMMOG00000001813	cpsf4	100	84.834	ENSMAUG00000021253	Cpsf4	100	84.834	Mesocricetus_auratus
ENSMMOG00000001813	cpsf4	100	84.834	ENSMICG00000017429	CPSF4	100	84.834	Microcebus_murinus
ENSMMOG00000001813	cpsf4	100	84.834	ENSMOCG00000014901	Cpsf4	100	84.834	Microtus_ochrogaster
ENSMMOG00000001813	cpsf4	100	84.444	ENSMODG00000001367	CPSF4	100	84.444	Monodelphis_domestica
ENSMMOG00000001813	cpsf4	100	90.226	ENSMALG00000012611	cpsf4	100	90.226	Monopterus_albus
ENSMMOG00000001813	cpsf4	100	84.834	MGP_CAROLIEiJ_G0028012	Cpsf4	100	84.834	Mus_caroli
ENSMMOG00000001813	cpsf4	100	84.834	ENSMUSG00000029625	Cpsf4	100	84.834	Mus_musculus
ENSMMOG00000001813	cpsf4	100	84.834	MGP_PahariEiJ_G0024581	Cpsf4	100	84.834	Mus_pahari
ENSMMOG00000001813	cpsf4	100	84.834	MGP_SPRETEiJ_G0029013	Cpsf4	100	84.834	Mus_spretus
ENSMMOG00000001813	cpsf4	100	83.704	ENSMPUG00000016508	CPSF4	100	83.704	Mustela_putorius_furo
ENSMMOG00000001813	cpsf4	87	80.172	ENSMLUG00000010980	CPSF4	100	80.172	Myotis_lucifugus
ENSMMOG00000001813	cpsf4	100	84.834	ENSNGAG00000001567	Cpsf4	100	84.834	Nannospalax_galili
ENSMMOG00000001813	cpsf4	91	91.322	ENSNBRG00000003943	cpsf4	98	91.322	Neolamprologus_brichardi
ENSMMOG00000001813	cpsf4	100	85.308	ENSNLEG00000011074	CPSF4	100	85.308	Nomascus_leucogenys
ENSMMOG00000001813	cpsf4	100	84.444	ENSMEUG00000006955	CPSF4	100	84.444	Notamacropus_eugenii
ENSMMOG00000001813	cpsf4	100	83.704	ENSOPRG00000013663	CPSF4	100	83.704	Ochotona_princeps
ENSMMOG00000001813	cpsf4	100	64.444	ENSODEG00000009779	-	100	64.444	Octodon_degus
ENSMMOG00000001813	cpsf4	95	80.625	ENSODEG00000018283	-	91	68.321	Octodon_degus
ENSMMOG00000001813	cpsf4	100	84.834	ENSODEG00000011181	-	100	84.834	Octodon_degus
ENSMMOG00000001813	cpsf4	100	91.729	ENSONIG00000008495	cpsf4	100	91.729	Oreochromis_niloticus
ENSMMOG00000001813	cpsf4	99	67.066	ENSOANG00000009568	-	100	52.518	Ornithorhynchus_anatinus
ENSMMOG00000001813	cpsf4	87	83.051	ENSOANG00000007729	CPSF4	100	83.051	Ornithorhynchus_anatinus
ENSMMOG00000001813	cpsf4	100	83.704	ENSOCUG00000002437	CPSF4	70	83.704	Oryctolagus_cuniculus
ENSMMOG00000001813	cpsf4	100	90.602	ENSORLG00000022798	cpsf4	100	90.602	Oryzias_latipes
ENSMMOG00000001813	cpsf4	100	90.602	ENSORLG00020008548	cpsf4	100	90.602	Oryzias_latipes_hni
ENSMMOG00000001813	cpsf4	100	90.226	ENSORLG00015019575	cpsf4	100	90.226	Oryzias_latipes_hsok
ENSMMOG00000001813	cpsf4	100	90.226	ENSOMEG00000005176	cpsf4	100	90.226	Oryzias_melastigma
ENSMMOG00000001813	cpsf4	100	83.704	ENSOGAG00000010884	CPSF4	100	83.704	Otolemur_garnettii
ENSMMOG00000001813	cpsf4	99	76.744	ENSOARG00000018668	CPSF4	100	73.723	Ovis_aries
ENSMMOG00000001813	cpsf4	100	85.308	ENSPPAG00000043355	CPSF4	100	85.308	Pan_paniscus
ENSMMOG00000001813	cpsf4	100	84.834	ENSPPRG00000003134	CPSF4	100	84.834	Panthera_pardus
ENSMMOG00000001813	cpsf4	90	83.951	ENSPTIG00000005604	CPSF4	90	83.951	Panthera_tigris_altaica
ENSMMOG00000001813	cpsf4	100	85.308	ENSPTRG00000019453	CPSF4	100	85.308	Pan_troglodytes
ENSMMOG00000001813	cpsf4	100	85.308	ENSPANG00000023123	CPSF4	100	85.308	Papio_anubis
ENSMMOG00000001813	cpsf4	95	87.879	ENSPKIG00000014278	cpsf4	100	82.847	Paramormyrops_kingsleyae
ENSMMOG00000001813	cpsf4	67	97.321	ENSPSIG00000011229	CPSF4	100	82.949	Pelodiscus_sinensis
ENSMMOG00000001813	cpsf4	71	79.167	ENSPSIG00000018198	-	100	59.535	Pelodiscus_sinensis
ENSMMOG00000001813	cpsf4	95	93.082	ENSPMGG00000017735	cpsf4	100	79.323	Periophthalmus_magnuspinnatus
ENSMMOG00000001813	cpsf4	100	84.834	ENSPEMG00000004508	Cpsf4	100	84.834	Peromyscus_maniculatus_bairdii
ENSMMOG00000001813	cpsf4	100	84.444	ENSPCIG00000024776	CPSF4	100	84.444	Phascolarctos_cinereus
ENSMMOG00000001813	cpsf4	100	89.850	ENSPFOG00000014912	cpsf4	100	89.850	Poecilia_formosa
ENSMMOG00000001813	cpsf4	100	86.207	ENSPLAG00000009599	cpsf4	100	82.331	Poecilia_latipinna
ENSMMOG00000001813	cpsf4	100	89.850	ENSPMEG00000009790	cpsf4	100	89.850	Poecilia_mexicana
ENSMMOG00000001813	cpsf4	100	89.474	ENSPREG00000018166	cpsf4	100	89.474	Poecilia_reticulata
ENSMMOG00000001813	cpsf4	87	82.979	ENSPPYG00000017378	CPSF4	100	82.979	Pongo_abelii
ENSMMOG00000001813	cpsf4	100	84.074	ENSPCAG00000001892	CPSF4	100	84.074	Procavia_capensis
ENSMMOG00000001813	cpsf4	100	84.834	ENSPCOG00000012771	CPSF4	100	84.834	Propithecus_coquereli
ENSMMOG00000001813	cpsf4	95	84.848	ENSPVAG00000007531	CPSF4	100	78.519	Pteropus_vampyrus
ENSMMOG00000001813	cpsf4	100	91.729	ENSPNYG00000018559	cpsf4	100	91.729	Pundamilia_nyererei
ENSMMOG00000001813	cpsf4	100	84.815	ENSPNAG00000003736	cpsf4	100	85.926	Pygocentrus_nattereri
ENSMMOG00000001813	cpsf4	100	84.834	ENSRNOG00000000985	Cpsf4	100	84.834	Rattus_norvegicus
ENSMMOG00000001813	cpsf4	87	83.404	ENSRBIG00000033886	CPSF4	100	85.227	Rhinopithecus_bieti
ENSMMOG00000001813	cpsf4	100	85.308	ENSRROG00000040431	CPSF4	100	85.308	Rhinopithecus_roxellana
ENSMMOG00000001813	cpsf4	100	85.308	ENSSBOG00000020493	CPSF4	100	85.308	Saimiri_boliviensis_boliviensis
ENSMMOG00000001813	cpsf4	100	84.444	ENSSHAG00000011533	CPSF4	100	84.444	Sarcophilus_harrisii
ENSMMOG00000001813	cpsf4	95	87.273	ENSSFOG00015007883	cpsf4	100	82.246	Scleropages_formosus
ENSMMOG00000001813	cpsf4	100	84.962	ENSSMAG00000006374	cpsf4	100	84.962	Scophthalmus_maximus
ENSMMOG00000001813	cpsf4	100	93.609	ENSSDUG00000018887	cpsf4	100	93.609	Seriola_dumerili
ENSMMOG00000001813	cpsf4	100	93.609	ENSSLDG00000019078	cpsf4	100	93.609	Seriola_lalandi_dorsalis
ENSMMOG00000001813	cpsf4	87	83.404	ENSSARG00000012416	CPSF4	100	83.404	Sorex_araneus
ENSMMOG00000001813	cpsf4	98	70.000	ENSSPUG00000014803	-	97	59.608	Sphenodon_punctatus
ENSMMOG00000001813	cpsf4	100	82.222	ENSSPUG00000003549	CPSF4	100	82.222	Sphenodon_punctatus
ENSMMOG00000001813	cpsf4	100	86.090	ENSSPAG00000006174	cpsf4	100	86.090	Stegastes_partitus
ENSMMOG00000001813	cpsf4	95	87.879	ENSSSCG00000026896	CPSF4	100	80.075	Sus_scrofa
ENSMMOG00000001813	cpsf4	95	83.832	ENSTGUG00000007552	CPSF4	100	78.358	Taeniopygia_guttata
ENSMMOG00000001813	cpsf4	100	90.977	ENSTRUG00000024220	cpsf4	100	90.977	Takifugu_rubripes
ENSMMOG00000001813	cpsf4	100	90.977	ENSTNIG00000006265	cpsf4	100	91.729	Tetraodon_nigroviridis
ENSMMOG00000001813	cpsf4	87	74.894	ENSTBEG00000011406	CPSF4	100	74.894	Tupaia_belangeri
ENSMMOG00000001813	cpsf4	95	87.349	ENSTTRG00000003007	CPSF4	79	95.455	Tursiops_truncatus
ENSMMOG00000001813	cpsf4	95	86.667	ENSUAMG00000008051	CPSF4	85	79.508	Ursus_americanus
ENSMMOG00000001813	cpsf4	95	87.879	ENSUMAG00000009474	CPSF4	100	80.827	Ursus_maritimus
ENSMMOG00000001813	cpsf4	95	87.879	ENSVVUG00000008824	CPSF4	100	80.075	Vulpes_vulpes
ENSMMOG00000001813	cpsf4	95	69.091	ENSXETG00000004641	cpsf4l	99	58.271	Xenopus_tropicalis
ENSMMOG00000001813	cpsf4	100	78.214	ENSXETG00000009892	cpsf4	100	78.571	Xenopus_tropicalis
ENSMMOG00000001813	cpsf4	100	89.474	ENSXCOG00000016040	cpsf4	100	89.474	Xiphophorus_couchianus
ENSMMOG00000001813	cpsf4	100	89.850	ENSXMAG00000024670	cpsf4	100	89.850	Xiphophorus_maculatus