EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMOG00000002363 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Minus strand
Length
8602 bases
Position
chrKV751346.1:9500934-9509535
Accession
ZDB-GENE-030131-9663
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000002940PABPPF00658.183.8e-3111
ENSMMOP00000002940RRM_5PF13893.63.4e-0911
ENSMMOP00000002940RRM_1PF00076.221.2e-8914
ENSMMOP00000002940RRM_1PF00076.221.2e-8924
ENSMMOP00000002940RRM_1PF00076.221.2e-8934
ENSMMOP00000002940RRM_1PF00076.221.2e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000002985-1842-ENSMMOP00000002940613 (aa)--
Gene Model
Click here to download ENSMMOG00000002363's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000002363's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMOG00000002363pabpc49876.364ENSMMOG00000018009pabpc1b9876.198
ENSMMOG00000002363pabpc46034.940ENSMMOG00000020264elavl48334.940
ENSMMOG00000002363pabpc46036.145ENSMMOG00000012031ELAVL29236.145
ENSMMOG00000002363pabpc45037.500ENSMMOG00000000550celf5a6037.500
ENSMMOG00000002363pabpc45838.889ENSMMOG00000017823-6738.889
ENSMMOG00000002363pabpc49877.243ENSMMOG00000018044pabpc1a9790.217
ENSMMOG00000002363pabpc49767.731ENSMMOG00000020574-9083.846
ENSMMOG00000002363pabpc45430.000ENSMMOG00000010492MSI15630.000
ENSMMOG00000002363pabpc45437.500ENSMMOG00000006702-5038.372
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000002363pabpc49981.359ENSG00000090621PABPC49996.396Homo_sapiens
ENSMMOG00000002363pabpc49993.031ENSAPOG00000001161pabpc410092.710Acanthochromis_polyacanthus
ENSMMOG00000002363pabpc49977.074ENSAMEG00000011535-10074.074Ailuropoda_melanoleuca
ENSMMOG00000002363pabpc49750.662ENSAMEG00000015083-9850.000Ailuropoda_melanoleuca
ENSMMOG00000002363pabpc410090.952ENSACIG00000023343pabpc410092.393Amphilophus_citrinellus
ENSMMOG00000002363pabpc49993.355ENSAOCG00000021529pabpc410093.027Amphiprion_ocellaris
ENSMMOG00000002363pabpc49993.355ENSAPEG00000019196pabpc410093.027Amphiprion_percula
ENSMMOG00000002363pabpc49992.395ENSATEG00000007402pabpc410092.516Anabas_testudineus
ENSMMOG00000002363pabpc49981.424ENSAPLG00000009729-10082.464Anas_platyrhynchos
ENSMMOG00000002363pabpc49882.740ENSACAG00000002544PABPC410081.283Anolis_carolinensis
ENSMMOG00000002363pabpc49979.507ENSANAG00000025079PABPC410080.346Aotus_nancymaae
ENSMMOG00000002363pabpc410092.823ENSACLG00000019558pabpc410092.663Astatotilapia_calliptera
ENSMMOG00000002363pabpc49981.476ENSAMXG00000018779pabpc49982.884Astyanax_mexicanus
ENSMMOG00000002363pabpc45984.431ENSBTAG00000048536-9384.431Bos_taurus
ENSMMOG00000002363pabpc49979.263ENSBTAG00000017125PABPC410078.923Bos_taurus
ENSMMOG00000002363pabpc47284.925ENSCJAG00000045953-7285.561Callithrix_jacchus
ENSMMOG00000002363pabpc49979.507ENSCJAG00000002512-10080.346Callithrix_jacchus
ENSMMOG00000002363pabpc49981.790ENSCAFG00000003081PABPC410080.503Canis_familiaris
ENSMMOG00000002363pabpc49582.372ENSCAFG00020004161PABPC410074.222Canis_lupus_dingo
ENSMMOG00000002363pabpc49977.225ENSCHIG00000019398-10074.667Capra_hircus
ENSMMOG00000002363pabpc49964.441ENSCHIG00000023385-10064.929Capra_hircus
ENSMMOG00000002363pabpc49981.319ENSTSYG00000006532PABPC410080.346Carlito_syrichta
ENSMMOG00000002363pabpc49981.789ENSCAPG00000015984PABPC410083.934Cavia_aperea
ENSMMOG00000002363pabpc49983.467ENSCPOG00000009552PABPC410083.065Cavia_porcellus
ENSMMOG00000002363pabpc49979.507ENSCCAG00000037306PABPC410080.346Cebus_capucinus
ENSMMOG00000002363pabpc49979.507ENSCATG00000042164PABPC410080.346Cercocebus_atys
ENSMMOG00000002363pabpc49981.476ENSCLAG00000011899PABPC410080.438Chinchilla_lanigera
ENSMMOG00000002363pabpc49975.852ENSCSAG00000001135PABPC410074.815Chlorocebus_sabaeus
ENSMMOG00000002363pabpc48889.211ENSCHOG00000005327PABPC47989.757Choloepus_hoffmanni
ENSMMOG00000002363pabpc49984.543ENSCPBG00000001038PABPC410083.412Chrysemys_picta_bellii
ENSMMOG00000002363pabpc49979.688ENSCANG00000034177PABPC410080.542Colobus_angolensis_palliatus
ENSMMOG00000002363pabpc49882.287ENSCGRG00001018166Pabpc410082.476Cricetulus_griseus_chok1gshd
ENSMMOG00000002363pabpc49782.516ENSCGRG00000009777Pabpc410081.280Cricetulus_griseus_crigri
ENSMMOG00000002363pabpc410091.866ENSCSEG00000000130pabpc410092.185Cynoglossus_semilaevis
ENSMMOG00000002363pabpc49992.532ENSCVAG00000019246pabpc410092.532Cyprinodon_variegatus
ENSMMOG00000002363pabpc49888.712ENSDARG00000059259pabpc410088.926Danio_rerio
ENSMMOG00000002363pabpc49978.028ENSDNOG00000018444-10079.115Dasypus_novemcinctus
ENSMMOG00000002363pabpc49979.692ENSDORG00000011581Pabpc410077.795Dipodomys_ordii
ENSMMOG00000002363pabpc49990.625ENSETEG00000018453-7290.625Echinops_telfairi
ENSMMOG00000002363pabpc48553.005ENSETEG00000009172-9952.717Echinops_telfairi
ENSMMOG00000002363pabpc49876.847ENSEBUG00000000992pabpc49976.519Eptatretus_burgeri
ENSMMOG00000002363pabpc49675.935ENSEBUG00000013782pabpc49975.641Eptatretus_burgeri
ENSMMOG00000002363pabpc49977.376ENSEASG00005014119PABPC410074.854Equus_asinus_asinus
ENSMMOG00000002363pabpc49977.376ENSECAG00000009396PABPC410074.854Equus_caballus
ENSMMOG00000002363pabpc49774.848ENSEEUG00000002962PABPC410074.074Erinaceus_europaeus
ENSMMOG00000002363pabpc49887.912ENSELUG00000003195pabpc410088.576Esox_lucius
ENSMMOG00000002363pabpc49981.790ENSFCAG00000015254-10080.503Felis_catus
ENSMMOG00000002363pabpc49981.395ENSFALG00000000543PABPC410083.703Ficedula_albicollis
ENSMMOG00000002363pabpc49974.519ENSFDAG00000020016-10074.074Fukomys_damarensis
ENSMMOG00000002363pabpc46749.574ENSFDAG00000010581-9948.951Fukomys_damarensis
ENSMMOG00000002363pabpc49991.693ENSFHEG00000007548pabpc410092.013Fundulus_heteroclitus
ENSMMOG00000002363pabpc410087.912ENSGMOG00000019025pabpc410087.284Gadus_morhua
ENSMMOG00000002363pabpc49984.385ENSGALG00000003800PABPC410083.254Gallus_gallus
ENSMMOG00000002363pabpc49990.938ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSMMOG00000002363pabpc410090.431ENSGACG00000007179pabpc410090.750Gasterosteus_aculeatus
ENSMMOG00000002363pabpc49984.543ENSGAGG00000001888PABPC410083.412Gopherus_agassizii
ENSMMOG00000002363pabpc49979.507ENSGGOG00000004002PABPC410080.346Gorilla_gorilla
ENSMMOG00000002363pabpc410092.823ENSHBUG00000020206pabpc410092.663Haplochromis_burtoni
ENSMMOG00000002363pabpc49981.476ENSHGLG00000011162PABPC410080.660Heterocephalus_glaber_female
ENSMMOG00000002363pabpc49981.476ENSHGLG00100001580PABPC410080.660Heterocephalus_glaber_male
ENSMMOG00000002363pabpc410090.159ENSHCOG00000012694pabpc410090.415Hippocampus_comes
ENSMMOG00000002363pabpc49788.264ENSIPUG00000016620pabpc410088.854Ictalurus_punctatus
ENSMMOG00000002363pabpc49981.359ENSSTOG00000010416PABPC410082.504Ictidomys_tridecemlineatus
ENSMMOG00000002363pabpc49978.891ENSJJAG00000007781Pabpc410078.241Jaculus_jaculus
ENSMMOG00000002363pabpc410093.811ENSKMAG00000013597pabpc410093.811Kryptolebias_marmoratus
ENSMMOG00000002363pabpc410091.879ENSLBEG00000013654pabpc49992.834Labrus_bergylta
ENSMMOG00000002363pabpc49982.812ENSLACG00000011907PABPC410083.780Latimeria_chalumnae
ENSMMOG00000002363pabpc49987.147ENSLOCG00000001877pabpc410086.792Lepisosteus_oculatus
ENSMMOG00000002363pabpc49981.359ENSLAFG00000000151PABPC410082.742Loxodonta_africana
ENSMMOG00000002363pabpc49979.507ENSMFAG00000041481PABPC410080.346Macaca_fascicularis
ENSMMOG00000002363pabpc49975.852ENSMMUG00000007497PABPC410074.815Macaca_mulatta
ENSMMOG00000002363pabpc49979.507ENSMNEG00000043054PABPC410080.189Macaca_nemestrina
ENSMMOG00000002363pabpc49979.507ENSMLEG00000040716PABPC410080.346Mandrillus_leucophaeus
ENSMMOG00000002363pabpc49993.204ENSMAMG00000010025pabpc410093.301Mastacembelus_armatus
ENSMMOG00000002363pabpc410092.663ENSMZEG00005006141pabpc410092.504Maylandia_zebra
ENSMMOG00000002363pabpc49881.145ENSMGAG00000005408PABPC410076.667Meleagris_gallopavo
ENSMMOG00000002363pabpc47889.583ENSMAUG00000019763-8485.321Mesocricetus_auratus
ENSMMOG00000002363pabpc47376.777ENSMAUG00000001295-8781.283Mesocricetus_auratus
ENSMMOG00000002363pabpc45980.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSMMOG00000002363pabpc49975.551ENSMICG00000036729-10074.632Microcebus_murinus
ENSMMOG00000002363pabpc48880.783ENSMICG00000016633-10080.783Microcebus_murinus
ENSMMOG00000002363pabpc410081.546ENSMOCG00000006763Pabpc410082.212Microtus_ochrogaster
ENSMMOG00000002363pabpc49781.636ENSMODG00000017657-10079.878Monodelphis_domestica
ENSMMOG00000002363pabpc46170.933ENSMODG00000018051-9670.933Monodelphis_domestica
ENSMMOG00000002363pabpc49992.903ENSMALG00000011017pabpc410092.846Monopterus_albus
ENSMMOG00000002363pabpc49971.280MGP_CAROLIEiJ_G0024864-10072.840Mus_caroli
ENSMMOG00000002363pabpc410077.246MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSMMOG00000002363pabpc410080.751ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSMMOG00000002363pabpc49977.693MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSMMOG00000002363pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSMMOG00000002363pabpc49977.376ENSMPUG00000014414-10074.815Mustela_putorius_furo
ENSMMOG00000002363pabpc49446.129ENSMPUG00000006836-10045.710Mustela_putorius_furo
ENSMMOG00000002363pabpc410080.945ENSMLUG00000012068PABPC410082.315Myotis_lucifugus
ENSMMOG00000002363pabpc49981.359ENSNGAG00000018292Pabpc410082.742Nannospalax_galili
ENSMMOG00000002363pabpc46798.193ENSNBRG00000010047-7298.193Neolamprologus_brichardi
ENSMMOG00000002363pabpc46199.038ENSNBRG00000009708pabpc49899.038Neolamprologus_brichardi
ENSMMOG00000002363pabpc49979.538ENSNLEG00000011928PABPC410080.346Nomascus_leucogenys
ENSMMOG00000002363pabpc48393.651ENSOPRG00000011984PABPC48193.651Ochotona_princeps
ENSMMOG00000002363pabpc45482.857ENSODEG00000013457-10082.857Octodon_degus
ENSMMOG00000002363pabpc49972.292ENSODEG00000017434-10071.190Octodon_degus
ENSMMOG00000002363pabpc49982.935ENSODEG00000006592-10081.399Octodon_degus
ENSMMOG00000002363pabpc410091.125ENSONIG00000008176pabpc410092.504Oreochromis_niloticus
ENSMMOG00000002363pabpc49983.491ENSOANG00000010001PABPC410083.096Ornithorhynchus_anatinus
ENSMMOG00000002363pabpc49575.969ENSOCUG00000000562PABPC48874.884Oryctolagus_cuniculus
ENSMMOG00000002363pabpc49996.914ENSORLG00000017479pabpc49996.914Oryzias_latipes
ENSMMOG00000002363pabpc49996.914ENSORLG00020018644pabpc410096.914Oryzias_latipes_hni
ENSMMOG00000002363pabpc49996.914ENSORLG00015015042pabpc410096.914Oryzias_latipes_hsok
ENSMMOG00000002363pabpc49991.909ENSOMEG00000014410pabpc410091.879Oryzias_melastigma
ENSMMOG00000002363pabpc49978.407ENSOGAG00000004067PABPC410078.528Otolemur_garnettii
ENSMMOG00000002363pabpc49977.225ENSOARG00000020060PABPC410074.667Ovis_aries
ENSMMOG00000002363pabpc49979.507ENSPPAG00000043625PABPC410080.346Pan_paniscus
ENSMMOG00000002363pabpc49981.790ENSPPRG00000024727PABPC410080.503Panthera_pardus
ENSMMOG00000002363pabpc49981.790ENSPTIG00000005829PABPC410080.503Panthera_tigris_altaica
ENSMMOG00000002363pabpc49979.507ENSPTRG00000000573PABPC410080.346Pan_troglodytes
ENSMMOG00000002363pabpc49981.790ENSPANG00000009484PABPC410080.346Papio_anubis
ENSMMOG00000002363pabpc49989.550ENSPKIG00000025356pabpc49988.585Paramormyrops_kingsleyae
ENSMMOG00000002363pabpc49984.858ENSPSIG00000016892PABPC410083.728Pelodiscus_sinensis
ENSMMOG00000002363pabpc410094.127ENSPMGG00000009073pabpc410092.985Periophthalmus_magnuspinnatus
ENSMMOG00000002363pabpc49980.975ENSPEMG00000023569-10080.094Peromyscus_maniculatus_bairdii
ENSMMOG00000002363pabpc49978.750ENSPEMG00000024193-10077.934Peromyscus_maniculatus_bairdii
ENSMMOG00000002363pabpc48873.345ENSPMAG00000002836pabpc410072.997Petromyzon_marinus
ENSMMOG00000002363pabpc49572.385ENSPMAG00000007885pabpc410071.197Petromyzon_marinus
ENSMMOG00000002363pabpc49691.076ENSPCIG00000020674PABPC410094.175Phascolarctos_cinereus
ENSMMOG00000002363pabpc49990.895ENSPFOG00000002682pabpc410091.374Poecilia_formosa
ENSMMOG00000002363pabpc49991.054ENSPLAG00000010112pabpc410091.534Poecilia_latipinna
ENSMMOG00000002363pabpc49891.558ENSPMEG00000019739pabpc410091.214Poecilia_mexicana
ENSMMOG00000002363pabpc49991.214ENSPREG00000001589pabpc410091.693Poecilia_reticulata
ENSMMOG00000002363pabpc49975.852ENSPPYG00000001506PABPC410074.815Pongo_abelii
ENSMMOG00000002363pabpc49972.398ENSPCAG00000003341PABPC48883.524Procavia_capensis
ENSMMOG00000002363pabpc49966.901ENSPCOG00000025882-10065.789Propithecus_coquereli
ENSMMOG00000002363pabpc49979.385ENSPCOG00000023725-10080.220Propithecus_coquereli
ENSMMOG00000002363pabpc49877.038ENSPVAG00000002187PABPC410073.115Pteropus_vampyrus
ENSMMOG00000002363pabpc410092.823ENSPNYG00000006134pabpc410092.663Pundamilia_nyererei
ENSMMOG00000002363pabpc49989.011ENSPNAG00000024355pabpc410089.857Pygocentrus_nattereri
ENSMMOG00000002363pabpc410079.141ENSRNOG00000015642Pabpc410078.648Rattus_norvegicus
ENSMMOG00000002363pabpc410077.147ENSRNOG00000028592AABR07035074.110076.651Rattus_norvegicus
ENSMMOG00000002363pabpc49979.507ENSRBIG00000039761PABPC410080.346Rhinopithecus_bieti
ENSMMOG00000002363pabpc49979.507ENSRROG00000033355PABPC410080.346Rhinopithecus_roxellana
ENSMMOG00000002363pabpc49981.790ENSSBOG00000026193PABPC410080.346Saimiri_boliviensis_boliviensis
ENSMMOG00000002363pabpc49785.209ENSSHAG00000018139PABPC410083.019Sarcophilus_harrisii
ENSMMOG00000002363pabpc49987.582ENSSFOG00015023514pabpc410087.745Scleropages_formosus
ENSMMOG00000002363pabpc410092.185ENSSMAG00000009007pabpc410092.504Scophthalmus_maximus
ENSMMOG00000002363pabpc49993.204ENSSDUG00000012683pabpc410093.301Seriola_dumerili
ENSMMOG00000002363pabpc49993.204ENSSLDG00000013025pabpc410093.301Seriola_lalandi_dorsalis
ENSMMOG00000002363pabpc49971.041ENSSARG00000000310PABPC410068.000Sorex_araneus
ENSMMOG00000002363pabpc49985.191ENSSPUG00000003204PABPC410083.892Sphenodon_punctatus
ENSMMOG00000002363pabpc49993.366ENSSPAG00000009252pabpc410093.142Stegastes_partitus
ENSMMOG00000002363pabpc49981.790ENSSSCG00000003660-10080.503Sus_scrofa
ENSMMOG00000002363pabpc48846.364ENSSSCG00000036170-9645.648Sus_scrofa
ENSMMOG00000002363pabpc49979.669ENSTGUG00000001266PABPC410078.030Taeniopygia_guttata
ENSMMOG00000002363pabpc410091.707ENSTRUG00000005907pabpc410092.026Takifugu_rubripes
ENSMMOG00000002363pabpc410088.942ENSTNIG00000016902pabpc410088.622Tetraodon_nigroviridis
ENSMMOG00000002363pabpc49965.050ENSTBEG00000009035PABPC410063.279Tupaia_belangeri
ENSMMOG00000002363pabpc49955.575ENSTTRG00000014340PABPC410062.295Tursiops_truncatus
ENSMMOG00000002363pabpc49981.790ENSUAMG00000000303PABPC410080.503Ursus_americanus
ENSMMOG00000002363pabpc49989.252ENSUMAG00000019585PABPC410089.252Ursus_maritimus
ENSMMOG00000002363pabpc46876.471ENSVPAG00000010041PABPC45170.206Vicugna_pacos
ENSMMOG00000002363pabpc49981.790ENSVVUG00000005215PABPC410080.503Vulpes_vulpes
ENSMMOG00000002363pabpc49979.937ENSXETG00000010946pabpc410079.430Xenopus_tropicalis
ENSMMOG00000002363pabpc46996.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSMMOG00000002363pabpc49990.778ENSXCOG00000013190pabpc49695.283Xiphophorus_couchianus
ENSMMOG00000002363pabpc49991.214ENSXMAG00000019007pabpc410091.693Xiphophorus_maculatus

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