EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMOG00000003327 (Gene tree)
Gene ID
-
Gene Symbol
scrt1b
Alias
zgc:113646
Full Name
scratch family zinc finger 1b
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Minus strand
Length
3988 bases
Position
chrKV751355.1:2169462-2173449
Accession
ZDB-GENE-050327-72
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000004158zf-C2H2PF00096.261.4e-2514
ENSMMOP00000004158zf-C2H2PF00096.261.4e-2524
ENSMMOP00000004158zf-C2H2PF00096.261.4e-2534
ENSMMOP00000004158zf-C2H2PF00096.261.4e-2544
ENSMMOP00000004158zf-metPF12874.72.1e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000004234-843-ENSMMOP00000004158280 (aa)--
Gene Model
Click here to download ENSMMOG00000003327's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000003327's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMOG00000003327scrt1b5040.196ENSMMOG00000012028-8038.462
ENSMMOG00000003327scrt1b5844.706ENSMMOG00000017597-7944.706
ENSMMOG00000003327scrt1b5539.535ENSMMOG00000005446-8739.535
ENSMMOG00000003327scrt1b5636.567ENSMMOG00000009733-7336.567
ENSMMOG00000003327scrt1b5636.957ENSMMOG00000013007-7036.957
ENSMMOG00000003327scrt1b5439.623ENSMMOG00000006143-6439.623
ENSMMOG00000003327scrt1b7037.398ENSMMOG00000016958-9144.304
ENSMMOG00000003327scrt1b5340.506ENSMMOG00000018454zbtb415540.506
ENSMMOG00000003327scrt1b5040.196ENSMMOG00000000504znf319b7640.196
ENSMMOG00000003327scrt1b7936.567ENSMMOG00000009252-8236.567
ENSMMOG00000003327scrt1b9134.211ENSMMOG00000000136znf710b6334.211
ENSMMOG00000003327scrt1b5339.759ENSMMOG00000002211-9639.759
ENSMMOG00000003327scrt1b6837.333ENSMMOG00000006137-8237.333
ENSMMOG00000003327scrt1b5437.121ENSMMOG00000020970-5137.121
ENSMMOG00000003327scrt1b9336.424ENSMMOG00000020560-9436.424
ENSMMOG00000003327scrt1b5148.077ENSMMOG00000020343-6048.077
ENSMMOG00000003327scrt1b5139.286ENSMMOG00000000284-6239.286
ENSMMOG00000003327scrt1b5243.421ENSMMOG00000006167gfi1aa5542.478
ENSMMOG00000003327scrt1b5844.000ENSMMOG00000018975-9942.342
ENSMMOG00000003327scrt1b5756.364ENSMMOG00000019626znf3415356.364
ENSMMOG00000003327scrt1b9974.333ENSMMOG00000018345-9974.333
ENSMMOG00000003327scrt1b6940.870ENSMMOG00000004134-9140.870
ENSMMOG00000003327scrt1b5834.965ENSMMOG00000017585-8334.965
ENSMMOG00000003327scrt1b7541.096ENSMMOG00000017586-8042.353
ENSMMOG00000003327scrt1b5146.875ENSMMOG00000017580-8636.735
ENSMMOG00000003327scrt1b5837.333ENSMMOG00000014996zbtb485137.333
ENSMMOG00000003327scrt1b5139.286ENSMMOG00000003923-7939.286
ENSMMOG00000003327scrt1b5531.707ENSMMOG00000009852-7731.707
ENSMMOG00000003327scrt1b5145.238ENSMMOG00000004460-8944.186
ENSMMOG00000003327scrt1b5136.111ENSMMOG00000006131-8236.111
ENSMMOG00000003327scrt1b5137.838ENSMMOG00000020682-5337.838
ENSMMOG00000003327scrt1b5037.255ENSMMOG00000016914ZNF3196737.255
ENSMMOG00000003327scrt1b7342.667ENSMMOG00000003268znf2365642.667
ENSMMOG00000003327scrt1b7637.500ENSMMOG00000007855-9444.262
ENSMMOG00000003327scrt1b8638.356ENSMMOG00000005457-9738.356
ENSMMOG00000003327scrt1b5138.235ENSMMOG00000011184-7138.235
ENSMMOG00000003327scrt1b6939.000ENSMMOG00000011436-6739.000
ENSMMOG00000003327scrt1b7637.500ENSMMOG00000006035prdm58237.500
ENSMMOG00000003327scrt1b8835.172ENSMMOG00000006322-9735.172
ENSMMOG00000003327scrt1b5535.185ENSMMOG00000005440-6136.111
ENSMMOG00000003327scrt1b5635.338ENSMMOG00000000056-9335.338
ENSMMOG00000003327scrt1b9664.379ENSMMOG00000009272scrt29765.359
ENSMMOG00000003327scrt1b7738.028ENSMMOG00000011282-9138.028
ENSMMOG00000003327scrt1b5040.964ENSMMOG00000009762-6342.857
ENSMMOG00000003327scrt1b5336.842ENSMMOG00000011221-9136.842
ENSMMOG00000003327scrt1b7537.500ENSMMOG00000016984-5237.500
ENSMMOG00000003327scrt1b5138.739ENSMMOG00000000299-9037.313
ENSMMOG00000003327scrt1b5040.000ENSMMOG00000010703-8240.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000003327scrt1b9976.224ENSAPOG00000015197-9976.224Acanthochromis_polyacanthus
ENSMMOG00000003327scrt1b10096.071ENSAPOG00000009279scrt1b10096.071Acanthochromis_polyacanthus
ENSMMOG00000003327scrt1b9668.841ENSAPOG00000003680scrt29668.841Acanthochromis_polyacanthus
ENSMMOG00000003327scrt1b10092.143ENSACIG00000013613scrt1b10092.143Amphilophus_citrinellus
ENSMMOG00000003327scrt1b9974.333ENSACIG00000006586-9974.333Amphilophus_citrinellus
ENSMMOG00000003327scrt1b9657.895ENSACIG00000001296-9657.566Amphilophus_citrinellus
ENSMMOG00000003327scrt1b9668.478ENSACIG00000012604scrt29668.478Amphilophus_citrinellus
ENSMMOG00000003327scrt1b9668.841ENSAOCG00000021557scrt29668.841Amphiprion_ocellaris
ENSMMOG00000003327scrt1b10096.429ENSAOCG00000003910scrt1b10096.429Amphiprion_ocellaris
ENSMMOG00000003327scrt1b9974.667ENSAOCG00000023304-9974.667Amphiprion_ocellaris
ENSMMOG00000003327scrt1b10096.429ENSAPEG00000000869scrt1b10096.429Amphiprion_percula
ENSMMOG00000003327scrt1b9668.841ENSAPEG00000022558scrt29668.841Amphiprion_percula
ENSMMOG00000003327scrt1b9974.667ENSAPEG00000005677-9974.667Amphiprion_percula
ENSMMOG00000003327scrt1b9654.633ENSATEG00000003195-9754.633Anabas_testudineus
ENSMMOG00000003327scrt1b9975.524ENSATEG00000011660-9975.524Anabas_testudineus
ENSMMOG00000003327scrt1b10095.714ENSATEG00000002302scrt1b10095.714Anabas_testudineus
ENSMMOG00000003327scrt1b9664.401ENSATEG00000023998scrt29764.401Anabas_testudineus
ENSMMOG00000003327scrt1b7675.117ENSACAG00000016109SCRT29575.117Anolis_carolinensis
ENSMMOG00000003327scrt1b10095.357ENSACLG00000007162scrt1b10095.357Astatotilapia_calliptera
ENSMMOG00000003327scrt1b9972.937ENSACLG00000012046-9972.937Astatotilapia_calliptera
ENSMMOG00000003327scrt1b10082.143ENSAMXG00000038085scrt1a10082.918Astyanax_mexicanus
ENSMMOG00000003327scrt1b9880.935ENSAMXG00000042624SCRT19980.935Astyanax_mexicanus
ENSMMOG00000003327scrt1b8372.803ENSAMXG00000034158scrt28772.803Astyanax_mexicanus
ENSMMOG00000003327scrt1b5862.963WBGene00000468ces-16161.677Caenorhabditis_elegans
ENSMMOG00000003327scrt1b9982.857ENSCPBG00000018899SCRT19982.857Chrysemys_picta_bellii
ENSMMOG00000003327scrt1b8660.159ENSCPBG00000027613SCRT210060.159Chrysemys_picta_bellii
ENSMMOG00000003327scrt1b8850.407ENSCGRG00000001380Scrt210050.407Cricetulus_griseus_crigri
ENSMMOG00000003327scrt1b9664.686ENSCSEG00000021542scrt29664.686Cynoglossus_semilaevis
ENSMMOG00000003327scrt1b9874.747ENSCSEG00000014892-9874.747Cynoglossus_semilaevis
ENSMMOG00000003327scrt1b10093.929ENSCSEG00000008596scrt1b10093.929Cynoglossus_semilaevis
ENSMMOG00000003327scrt1b10095.714ENSCVAG00000009561scrt1b10095.714Cyprinodon_variegatus
ENSMMOG00000003327scrt1b9664.078ENSCVAG00000021038scrt29765.049Cyprinodon_variegatus
ENSMMOG00000003327scrt1b9974.667ENSCVAG00000003190-9974.667Cyprinodon_variegatus
ENSMMOG00000003327scrt1b10085.765ENSDARG00000100821scrt1a10085.765Danio_rerio
ENSMMOG00000003327scrt1b10084.342ENSDARG00000040214scrt1b10084.342Danio_rerio
ENSMMOG00000003327scrt1b9766.333ENSELUG00000023883scrt29665.667Esox_lucius
ENSMMOG00000003327scrt1b9985.714ENSELUG00000022228scrt1a9985.714Esox_lucius
ENSMMOG00000003327scrt1b9987.050ENSELUG00000005435scrt1b9987.050Esox_lucius
ENSMMOG00000003327scrt1b8370.690ENSFALG00000005718SCRT29670.690Ficedula_albicollis
ENSMMOG00000003327scrt1b9661.255ENSFDAG00000008733SCRT19761.255Fukomys_damarensis
ENSMMOG00000003327scrt1b9670.652ENSFHEG00000005732scrt29670.652Fundulus_heteroclitus
ENSMMOG00000003327scrt1b9975.000ENSFHEG00000009794-9975.000Fundulus_heteroclitus
ENSMMOG00000003327scrt1b10095.357ENSFHEG00000014820scrt1b10095.357Fundulus_heteroclitus
ENSMMOG00000003327scrt1b9659.871ENSGMOG00000019519scrt29559.871Gadus_morhua
ENSMMOG00000003327scrt1b5792.742ENSGMOG00000013833-5492.742Gadus_morhua
ENSMMOG00000003327scrt1b9991.039ENSGMOG00000000629scrt1b10091.039Gadus_morhua
ENSMMOG00000003327scrt1b9663.971ENSGALG00000028912SCRT29764.469Gallus_gallus
ENSMMOG00000003327scrt1b10095.357ENSGAFG00000007636scrt1b10095.357Gambusia_affinis
ENSMMOG00000003327scrt1b9975.532ENSGAFG00000009650-9975.532Gambusia_affinis
ENSMMOG00000003327scrt1b9666.667ENSGAFG00000003093scrt29667.677Gambusia_affinis
ENSMMOG00000003327scrt1b9992.115ENSGACG00000008982scrt1b9992.115Gasterosteus_aculeatus
ENSMMOG00000003327scrt1b9972.635ENSGACG00000004072-9972.635Gasterosteus_aculeatus
ENSMMOG00000003327scrt1b6381.818ENSGAGG00000020760-6881.818Gopherus_agassizii
ENSMMOG00000003327scrt1b9663.603ENSGAGG00000020761SCRT29663.603Gopherus_agassizii
ENSMMOG00000003327scrt1b9983.094ENSGAGG00000011736SCRT110083.094Gopherus_agassizii
ENSMMOG00000003327scrt1b9974.667ENSHBUG00000019101-9974.667Haplochromis_burtoni
ENSMMOG00000003327scrt1b10095.357ENSHBUG00000016621scrt1b10095.357Haplochromis_burtoni
ENSMMOG00000003327scrt1b9669.565ENSHBUG00000012492scrt29669.565Haplochromis_burtoni
ENSMMOG00000003327scrt1b9665.646ENSHCOG00000008116scrt29665.646Hippocampus_comes
ENSMMOG00000003327scrt1b9969.072ENSHCOG00000016179-9969.072Hippocampus_comes
ENSMMOG00000003327scrt1b10092.143ENSHCOG00000016704scrt1b10092.143Hippocampus_comes
ENSMMOG00000003327scrt1b9984.588ENSIPUG00000004551scrt1a9984.588Ictalurus_punctatus
ENSMMOG00000003327scrt1b9877.455ENSIPUG00000005547-9977.455Ictalurus_punctatus
ENSMMOG00000003327scrt1b5085.106ENSSTOG00000032944SCRT28480.255Ictidomys_tridecemlineatus
ENSMMOG00000003327scrt1b9973.333ENSKMAG00000009489-9975.000Kryptolebias_marmoratus
ENSMMOG00000003327scrt1b9664.078ENSKMAG00000018087scrt29764.078Kryptolebias_marmoratus
ENSMMOG00000003327scrt1b10095.357ENSKMAG00000005484scrt1b10095.357Kryptolebias_marmoratus
ENSMMOG00000003327scrt1b9972.819ENSLBEG00000023388-9973.490Labrus_bergylta
ENSMMOG00000003327scrt1b9663.871ENSLBEG00000015419scrt29763.871Labrus_bergylta
ENSMMOG00000003327scrt1b10083.630ENSLACG00000003588SCRT19983.630Latimeria_chalumnae
ENSMMOG00000003327scrt1b9652.751ENSLOCG00000002246scrt29752.581Lepisosteus_oculatus
ENSMMOG00000003327scrt1b10087.189ENSLOCG00000007573scrt1b10087.189Lepisosteus_oculatus
ENSMMOG00000003327scrt1b9694.074ENSMFAG00000035496SCRT17188.158Macaca_fascicularis
ENSMMOG00000003327scrt1b10095.714ENSMAMG00000011698scrt1b10095.714Mastacembelus_armatus
ENSMMOG00000003327scrt1b9664.401ENSMAMG00000001291scrt29764.401Mastacembelus_armatus
ENSMMOG00000003327scrt1b9974.667ENSMZEG00005026702-9974.667Maylandia_zebra
ENSMMOG00000003327scrt1b9669.565ENSMZEG00005026445scrt29669.565Maylandia_zebra
ENSMMOG00000003327scrt1b10095.357ENSMZEG00005005627scrt1b10095.357Maylandia_zebra
ENSMMOG00000003327scrt1b8369.264ENSMGAG00000016579SCRT29669.264Meleagris_gallopavo
ENSMMOG00000003327scrt1b9668.231ENSMALG00000013656scrt29668.231Monopterus_albus
ENSMMOG00000003327scrt1b10095.714ENSMALG00000012704scrt1b10095.714Monopterus_albus
ENSMMOG00000003327scrt1b9653.160ENSNGAG00000020815Scrt27382.119Nannospalax_galili
ENSMMOG00000003327scrt1b10090.714ENSNBRG00000013983scrt1b10090.714Neolamprologus_brichardi
ENSMMOG00000003327scrt1b9974.333ENSNBRG00000014882-9974.333Neolamprologus_brichardi
ENSMMOG00000003327scrt1b9669.203ENSNBRG00000007221scrt29669.203Neolamprologus_brichardi
ENSMMOG00000003327scrt1b9664.401ENSONIG00000016758scrt29764.401Oreochromis_niloticus
ENSMMOG00000003327scrt1b9671.242ENSONIG00000019809-9971.242Oreochromis_niloticus
ENSMMOG00000003327scrt1b9661.071ENSONIG00000003152-9661.071Oreochromis_niloticus
ENSMMOG00000003327scrt1b10095.357ENSONIG00000006007scrt1b10095.357Oreochromis_niloticus
ENSMMOG00000003327scrt1b9973.090ENSORLG00000022825-9973.090Oryzias_latipes
ENSMMOG00000003327scrt1b9664.401ENSORLG00000024051scrt29764.401Oryzias_latipes
ENSMMOG00000003327scrt1b10095.357ENSORLG00000025651scrt1b10095.357Oryzias_latipes
ENSMMOG00000003327scrt1b10095.357ENSORLG00020012967scrt1b10095.357Oryzias_latipes_hni
ENSMMOG00000003327scrt1b9664.401ENSORLG00020011478scrt29764.401Oryzias_latipes_hni
ENSMMOG00000003327scrt1b10095.357ENSORLG00015019165scrt1b10095.357Oryzias_latipes_hsok
ENSMMOG00000003327scrt1b9973.422ENSORLG00015010104-9973.422Oryzias_latipes_hsok
ENSMMOG00000003327scrt1b9664.401ENSORLG00015005524scrt29764.401Oryzias_latipes_hsok
ENSMMOG00000003327scrt1b9975.585ENSOMEG00000000286-9975.585Oryzias_melastigma
ENSMMOG00000003327scrt1b9664.078ENSOMEG00000002661scrt29764.078Oryzias_melastigma
ENSMMOG00000003327scrt1b10095.357ENSOMEG00000003925scrt1b10095.357Oryzias_melastigma
ENSMMOG00000003327scrt1b10086.833ENSPKIG00000022303SCRT110086.833Paramormyrops_kingsleyae
ENSMMOG00000003327scrt1b10084.698ENSPKIG00000020085scrt1a10084.698Paramormyrops_kingsleyae
ENSMMOG00000003327scrt1b9669.314ENSPMGG00000016561scrt29669.314Periophthalmus_magnuspinnatus
ENSMMOG00000003327scrt1b9973.064ENSPMGG00000021402-9973.064Periophthalmus_magnuspinnatus
ENSMMOG00000003327scrt1b10090.357ENSPMGG00000002260scrt1b10090.357Periophthalmus_magnuspinnatus
ENSMMOG00000003327scrt1b9663.754ENSPFOG00000007738scrt29764.725Poecilia_formosa
ENSMMOG00000003327scrt1b9974.747ENSPFOG00000005616-9974.747Poecilia_formosa
ENSMMOG00000003327scrt1b10095.357ENSPFOG00000017719scrt1b10095.357Poecilia_formosa
ENSMMOG00000003327scrt1b10095.357ENSPLAG00000009876scrt1b10095.357Poecilia_latipinna
ENSMMOG00000003327scrt1b9974.747ENSPLAG00000011718-9974.747Poecilia_latipinna
ENSMMOG00000003327scrt1b9670.397ENSPLAG00000005765scrt29670.397Poecilia_latipinna
ENSMMOG00000003327scrt1b9670.397ENSPMEG00000001538scrt29670.397Poecilia_mexicana
ENSMMOG00000003327scrt1b10095.357ENSPMEG00000013274scrt1b10095.357Poecilia_mexicana
ENSMMOG00000003327scrt1b9974.747ENSPMEG00000011706-9974.747Poecilia_mexicana
ENSMMOG00000003327scrt1b10095.357ENSPREG00000018985scrt1b10095.357Poecilia_reticulata
ENSMMOG00000003327scrt1b9663.754ENSPREG00000001147scrt29764.725Poecilia_reticulata
ENSMMOG00000003327scrt1b9974.074ENSPREG00000012166-9974.074Poecilia_reticulata
ENSMMOG00000003327scrt1b9669.565ENSPNYG00000013109scrt29669.565Pundamilia_nyererei
ENSMMOG00000003327scrt1b9974.667ENSPNYG00000008865-9974.667Pundamilia_nyererei
ENSMMOG00000003327scrt1b10095.357ENSPNYG00000017733scrt1b10095.357Pundamilia_nyererei
ENSMMOG00000003327scrt1b10083.986ENSPNAG00000017415scrt1a10083.986Pygocentrus_nattereri
ENSMMOG00000003327scrt1b9881.949ENSPNAG00000027880-9981.949Pygocentrus_nattereri
ENSMMOG00000003327scrt1b10085.409ENSSFOG00015001195SCRT110085.409Scleropages_formosus
ENSMMOG00000003327scrt1b9993.548ENSSMAG00000019207scrt1b9993.548Scophthalmus_maximus
ENSMMOG00000003327scrt1b9972.848ENSSMAG00000005122-9972.848Scophthalmus_maximus
ENSMMOG00000003327scrt1b10095.714ENSSDUG00000007752scrt1b10095.714Seriola_dumerili
ENSMMOG00000003327scrt1b9865.101ENSSDUG00000001637scrt29665.101Seriola_dumerili
ENSMMOG00000003327scrt1b9975.000ENSSDUG00000013215-9975.000Seriola_dumerili
ENSMMOG00000003327scrt1b10095.714ENSSLDG00000017166scrt1b10095.714Seriola_lalandi_dorsalis
ENSMMOG00000003327scrt1b9975.000ENSSLDG00000016454-9975.000Seriola_lalandi_dorsalis
ENSMMOG00000003327scrt1b9663.754ENSSLDG00000013565scrt29763.754Seriola_lalandi_dorsalis
ENSMMOG00000003327scrt1b9664.945ENSSPUG00000018637SCRT29764.945Sphenodon_punctatus
ENSMMOG00000003327scrt1b10095.714ENSSPAG00000002200scrt1b10095.714Stegastes_partitus
ENSMMOG00000003327scrt1b9669.203ENSSPAG00000014018scrt29669.203Stegastes_partitus
ENSMMOG00000003327scrt1b9973.333ENSSPAG00000006788-9975.000Stegastes_partitus
ENSMMOG00000003327scrt1b8370.563ENSTGUG00000006801SCRT29970.563Taeniopygia_guttata
ENSMMOG00000003327scrt1b9896.000ENSTRUG00000011637scrt1b9996.000Takifugu_rubripes
ENSMMOG00000003327scrt1b9667.354ENSTRUG00000007620scrt29667.354Takifugu_rubripes
ENSMMOG00000003327scrt1b9973.490ENSTRUG00000012719-9973.490Takifugu_rubripes
ENSMMOG00000003327scrt1b8675.820ENSTRUG00000019558-8175.820Takifugu_rubripes
ENSMMOG00000003327scrt1b10095.714ENSTNIG00000018384scrt1b10095.714Tetraodon_nigroviridis
ENSMMOG00000003327scrt1b9669.892ENSTNIG00000012473scrt29769.892Tetraodon_nigroviridis
ENSMMOG00000003327scrt1b9974.113ENSXCOG00000019861-9974.113Xiphophorus_couchianus
ENSMMOG00000003327scrt1b9667.003ENSXCOG00000014367scrt29668.013Xiphophorus_couchianus
ENSMMOG00000003327scrt1b10095.000ENSXCOG00000019675scrt1b10095.000Xiphophorus_couchianus
ENSMMOG00000003327scrt1b10095.000ENSXMAG00000027885scrt1b10095.000Xiphophorus_maculatus
ENSMMOG00000003327scrt1b9974.411ENSXMAG00000015353-9974.411Xiphophorus_maculatus
ENSMMOG00000003327scrt1b9664.078ENSXMAG00000028567scrt29765.049Xiphophorus_maculatus

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