EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000003394 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 15092 bases
Position: chrKV751355.1:2532043-2547134
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000004243	ResIII	PF04851.15	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000004319	-	2628	-	ENSMMOP00000004243	875 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000003394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000003394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000003394	rad54b	59	31.076	ENSMMOG00000020762	ercc6l	79	42.424
ENSMMOG00000003394	rad54b	67	31.864	ENSMMOG00000005547	smarca5	55	31.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000003394	rad54b	82	57.945	ENSG00000265817	FSBP	99	57.945	Homo_sapiens
ENSMMOG00000003394	rad54b	99	54.239	ENSG00000197275	RAD54B	99	54.239	Homo_sapiens
ENSMMOG00000003394	rad54b	99	53.871	ENSAMEG00000005834	-	99	53.871	Ailuropoda_melanoleuca
ENSMMOG00000003394	rad54b	99	80.226	ENSACIG00000013005	rad54b	99	80.226	Amphilophus_citrinellus
ENSMMOG00000003394	rad54b	99	76.874	ENSAOCG00000008523	rad54b	99	76.874	Amphiprion_ocellaris
ENSMMOG00000003394	rad54b	99	78.330	ENSAPEG00000001673	rad54b	99	78.330	Amphiprion_percula
ENSMMOG00000003394	rad54b	97	85.006	ENSATEG00000001527	rad54b	99	82.633	Anabas_testudineus
ENSMMOG00000003394	rad54b	99	55.736	ENSAPLG00000014366	-	99	55.736	Anas_platyrhynchos
ENSMMOG00000003394	rad54b	89	60.102	ENSACAG00000003671	-	98	60.102	Anolis_carolinensis
ENSMMOG00000003394	rad54b	72	59.317	ENSANAG00000019528	-	99	59.317	Aotus_nancymaae
ENSMMOG00000003394	rad54b	99	81.385	ENSACLG00000007826	rad54b	99	81.385	Astatotilapia_calliptera
ENSMMOG00000003394	rad54b	88	66.961	ENSAMXG00000039985	rad54b	94	66.708	Astyanax_mexicanus
ENSMMOG00000003394	rad54b	99	54.407	ENSBTAG00000000632	RAD54B	99	54.407	Bos_taurus
ENSMMOG00000003394	rad54b	80	34.530	WBGene00013792	Y116A8C.13	80	35.090	Caenorhabditis_elegans
ENSMMOG00000003394	rad54b	99	54.022	ENSCJAG00000000080	-	99	57.613	Callithrix_jacchus
ENSMMOG00000003394	rad54b	99	54.437	ENSCAFG00000009179	RAD54B	99	54.437	Canis_familiaris
ENSMMOG00000003394	rad54b	99	54.437	ENSCAFG00020012084	-	99	54.437	Canis_lupus_dingo
ENSMMOG00000003394	rad54b	99	54.694	ENSCHIG00000008230	-	99	54.694	Capra_hircus
ENSMMOG00000003394	rad54b	99	54.526	ENSTSYG00000013234	-	99	54.526	Carlito_syrichta
ENSMMOG00000003394	rad54b	99	53.963	ENSCPOG00000011643	-	99	54.796	Cavia_porcellus
ENSMMOG00000003394	rad54b	99	53.913	ENSCCAG00000011754	-	99	57.750	Cebus_capucinus
ENSMMOG00000003394	rad54b	99	53.813	ENSCATG00000030661	-	99	57.692	Cercocebus_atys
ENSMMOG00000003394	rad54b	99	54.576	ENSCLAG00000010476	-	99	54.576	Chinchilla_lanigera
ENSMMOG00000003394	rad54b	99	53.922	ENSCSAG00000012712	-	99	53.922	Chlorocebus_sabaeus
ENSMMOG00000003394	rad54b	99	55.930	ENSCPBG00000003204	-	99	55.930	Chrysemys_picta_bellii
ENSMMOG00000003394	rad54b	99	54.248	ENSCANG00000017939	-	99	57.967	Colobus_angolensis_palliatus
ENSMMOG00000003394	rad54b	99	54.423	ENSCGRG00001020184	Rad54b	99	54.423	Cricetulus_griseus_chok1gshd
ENSMMOG00000003394	rad54b	99	53.215	ENSCGRG00000016752	Rad54b	99	53.215	Cricetulus_griseus_crigri
ENSMMOG00000003394	rad54b	99	78.767	ENSCSEG00000001601	rad54b	99	78.767	Cynoglossus_semilaevis
ENSMMOG00000003394	rad54b	99	77.753	ENSCVAG00000009200	rad54b	99	77.753	Cyprinodon_variegatus
ENSMMOG00000003394	rad54b	99	62.514	ENSDARG00000092134	rad54b	99	67.863	Danio_rerio
ENSMMOG00000003394	rad54b	99	54.664	ENSDNOG00000015535	-	99	54.664	Dasypus_novemcinctus
ENSMMOG00000003394	rad54b	99	56.067	ENSDORG00000002492	Rad54b	99	56.067	Dipodomys_ordii
ENSMMOG00000003394	rad54b	87	57.268	ENSETEG00000010605	-	100	57.268	Echinops_telfairi
ENSMMOG00000003394	rad54b	89	49.499	ENSEBUG00000009104	rad54b	84	49.499	Eptatretus_burgeri
ENSMMOG00000003394	rad54b	89	57.980	ENSEASG00005004021	-	89	57.980	Equus_asinus_asinus
ENSMMOG00000003394	rad54b	99	53.680	ENSECAG00000021949	-	99	53.680	Equus_caballus
ENSMMOG00000003394	rad54b	74	49.400	ENSEEUG00000008056	-	72	49.400	Erinaceus_europaeus
ENSMMOG00000003394	rad54b	99	69.486	ENSELUG00000009287	rad54b	99	69.486	Esox_lucius
ENSMMOG00000003394	rad54b	99	54.004	ENSFCAG00000015513	-	99	58.187	Felis_catus
ENSMMOG00000003394	rad54b	91	60.098	ENSFALG00000005467	-	87	60.098	Ficedula_albicollis
ENSMMOG00000003394	rad54b	99	54.054	ENSFDAG00000020541	-	99	54.054	Fukomys_damarensis
ENSMMOG00000003394	rad54b	96	77.370	ENSFHEG00000014382	rad54b	92	77.370	Fundulus_heteroclitus
ENSMMOG00000003394	rad54b	89	81.392	ENSGMOG00000014774	rad54b	98	81.392	Gadus_morhua
ENSMMOG00000003394	rad54b	92	60.513	ENSGALG00000043597	RAD54B	88	60.513	Gallus_gallus
ENSMMOG00000003394	rad54b	99	79.205	ENSGAFG00000007901	rad54b	99	79.205	Gambusia_affinis
ENSMMOG00000003394	rad54b	99	76.056	ENSGACG00000009128	rad54b	99	76.056	Gasterosteus_aculeatus
ENSMMOG00000003394	rad54b	99	55.870	ENSGAGG00000018747	-	99	55.870	Gopherus_agassizii
ENSMMOG00000003394	rad54b	99	54.089	ENSGGOG00000023516	-	99	54.089	Gorilla_gorilla
ENSMMOG00000003394	rad54b	92	85.450	ENSHBUG00000016017	rad54b	86	85.450	Haplochromis_burtoni
ENSMMOG00000003394	rad54b	99	53.219	ENSHGLG00000008263	RAD54B	99	53.219	Heterocephalus_glaber_female
ENSMMOG00000003394	rad54b	99	52.559	ENSHGLG00100008108	-	99	52.941	Heterocephalus_glaber_male
ENSMMOG00000003394	rad54b	99	72.291	ENSHCOG00000004764	rad54b	98	75.686	Hippocampus_comes
ENSMMOG00000003394	rad54b	89	65.496	ENSIPUG00000018531	rad54b	84	65.496	Ictalurus_punctatus
ENSMMOG00000003394	rad54b	99	53.275	ENSSTOG00000010791	-	99	53.275	Ictidomys_tridecemlineatus
ENSMMOG00000003394	rad54b	99	52.814	ENSJJAG00000010314	Rad54b	99	52.814	Jaculus_jaculus
ENSMMOG00000003394	rad54b	99	75.113	ENSKMAG00000004744	rad54b	99	75.113	Kryptolebias_marmoratus
ENSMMOG00000003394	rad54b	84	63.333	ENSLACG00000000859	-	100	63.333	Latimeria_chalumnae
ENSMMOG00000003394	rad54b	93	66.065	ENSLOCG00000010100	rad54b	94	67.621	Lepisosteus_oculatus
ENSMMOG00000003394	rad54b	89	57.268	ENSLAFG00000015315	-	97	57.268	Loxodonta_africana
ENSMMOG00000003394	rad54b	99	53.688	ENSMFAG00000031629	-	99	57.514	Macaca_fascicularis
ENSMMOG00000003394	rad54b	99	53.688	ENSMMUG00000005659	-	99	53.688	Macaca_mulatta
ENSMMOG00000003394	rad54b	99	53.762	ENSMNEG00000016408	-	99	53.762	Macaca_nemestrina
ENSMMOG00000003394	rad54b	99	53.813	ENSMLEG00000006946	-	99	53.813	Mandrillus_leucophaeus
ENSMMOG00000003394	rad54b	99	79.484	ENSMAMG00000012269	rad54b	99	79.484	Mastacembelus_armatus
ENSMMOG00000003394	rad54b	92	85.450	ENSMZEG00005005281	rad54b	97	85.679	Maylandia_zebra
ENSMMOG00000003394	rad54b	91	60.099	ENSMGAG00000012024	-	87	60.099	Meleagris_gallopavo
ENSMMOG00000003394	rad54b	99	53.984	ENSMAUG00000013586	Rad54b	99	53.984	Mesocricetus_auratus
ENSMMOG00000003394	rad54b	99	54.882	ENSMICG00000000754	-	99	54.882	Microcebus_murinus
ENSMMOG00000003394	rad54b	99	54.102	ENSMOCG00000020035	Rad54b	99	54.153	Microtus_ochrogaster
ENSMMOG00000003394	rad54b	89	58.302	ENSMODG00000007343	-	96	58.302	Monodelphis_domestica
ENSMMOG00000003394	rad54b	72	87.994	ENSMALG00000001520	rad54b	99	87.994	Monopterus_albus
ENSMMOG00000003394	rad54b	99	54.264	MGP_CAROLIEiJ_G0025810	Rad54b	99	54.264	Mus_caroli
ENSMMOG00000003394	rad54b	99	53.275	ENSMUSG00000078773	Rad54b	99	53.275	Mus_musculus
ENSMMOG00000003394	rad54b	99	54.051	MGP_PahariEiJ_G0023933	Rad54b	99	54.051	Mus_pahari
ENSMMOG00000003394	rad54b	99	53.603	MGP_SPRETEiJ_G0026758	Rad54b	99	53.603	Mus_spretus
ENSMMOG00000003394	rad54b	89	59.068	ENSMPUG00000008878	-	97	59.068	Mustela_putorius_furo
ENSMMOG00000003394	rad54b	99	54.121	ENSMLUG00000008953	-	99	54.121	Myotis_lucifugus
ENSMMOG00000003394	rad54b	99	54.895	ENSNGAG00000017537	Rad54b	99	54.895	Nannospalax_galili
ENSMMOG00000003394	rad54b	99	81.271	ENSNBRG00000013394	rad54b	99	81.271	Neolamprologus_brichardi
ENSMMOG00000003394	rad54b	99	54.089	ENSNLEG00000003062	-	99	57.671	Nomascus_leucogenys
ENSMMOG00000003394	rad54b	71	63.590	ENSMEUG00000012426	-	69	63.590	Notamacropus_eugenii
ENSMMOG00000003394	rad54b	82	77.273	ENSODEG00000002650	-	97	77.273	Octodon_degus
ENSMMOG00000003394	rad54b	89	59.119	ENSODEG00000019564	-	87	59.119	Octodon_degus
ENSMMOG00000003394	rad54b	99	80.022	ENSONIG00000006067	rad54b	99	80.022	Oreochromis_niloticus
ENSMMOG00000003394	rad54b	85	59.552	ENSOANG00000011348	-	99	59.631	Ornithorhynchus_anatinus
ENSMMOG00000003394	rad54b	91	58.272	ENSOCUG00000016478	-	87	58.272	Oryctolagus_cuniculus
ENSMMOG00000003394	rad54b	92	81.058	ENSORLG00000008918	rad54b	99	84.062	Oryzias_latipes
ENSMMOG00000003394	rad54b	72	83.906	ENSORLG00020012171	rad54b	99	83.906	Oryzias_latipes_hni
ENSMMOG00000003394	rad54b	92	80.637	ENSORLG00015018536	rad54b	87	80.637	Oryzias_latipes_hsok
ENSMMOG00000003394	rad54b	87	82.415	ENSOMEG00000004345	rad54b	99	82.415	Oryzias_melastigma
ENSMMOG00000003394	rad54b	99	52.505	ENSOGAG00000007854	-	99	52.505	Otolemur_garnettii
ENSMMOG00000003394	rad54b	89	58.668	ENSOARG00000007691	-	97	58.668	Ovis_aries
ENSMMOG00000003394	rad54b	99	52.826	ENSPPAG00000029572	-	99	52.826	Pan_paniscus
ENSMMOG00000003394	rad54b	99	53.571	ENSPPRG00000007571	-	99	57.916	Panthera_pardus
ENSMMOG00000003394	rad54b	82	57.781	ENSPTIG00000012670	-	99	57.781	Panthera_tigris_altaica
ENSMMOG00000003394	rad54b	99	53.913	ENSPTRG00000020427	-	99	57.671	Pan_troglodytes
ENSMMOG00000003394	rad54b	99	53.813	ENSPANG00000019566	-	99	53.813	Papio_anubis
ENSMMOG00000003394	rad54b	99	60.799	ENSPKIG00000014974	rad54b	99	60.799	Paramormyrops_kingsleyae
ENSMMOG00000003394	rad54b	89	60.530	ENSPSIG00000002383	-	95	60.606	Pelodiscus_sinensis
ENSMMOG00000003394	rad54b	99	54.535	ENSPEMG00000012133	Rad54b	99	54.535	Peromyscus_maniculatus_bairdii
ENSMMOG00000003394	rad54b	89	56.927	ENSPMAG00000002916	rad54b	98	56.927	Petromyzon_marinus
ENSMMOG00000003394	rad54b	89	59.004	ENSPCIG00000020151	-	91	58.726	Phascolarctos_cinereus
ENSMMOG00000003394	rad54b	96	82.780	ENSPFOG00000023411	rad54b	90	82.780	Poecilia_formosa
ENSMMOG00000003394	rad54b	99	82.657	ENSPLAG00000010430	rad54b	93	82.657	Poecilia_latipinna
ENSMMOG00000003394	rad54b	96	82.903	ENSPMEG00000016873	rad54b	99	76.932	Poecilia_mexicana
ENSMMOG00000003394	rad54b	98	82.488	ENSPREG00000018443	rad54b	99	79.954	Poecilia_reticulata
ENSMMOG00000003394	rad54b	99	54.130	ENSPPYG00000018750	-	99	54.130	Pongo_abelii
ENSMMOG00000003394	rad54b	99	53.913	ENSPCOG00000026845	-	99	57.279	Propithecus_coquereli
ENSMMOG00000003394	rad54b	84	57.162	ENSPVAG00000000261	-	86	57.162	Pteropus_vampyrus
ENSMMOG00000003394	rad54b	90	84.025	ENSPNYG00000018303	rad54b	97	84.025	Pundamilia_nyererei
ENSMMOG00000003394	rad54b	99	62.585	ENSPNAG00000000295	rad54b	99	62.585	Pygocentrus_nattereri
ENSMMOG00000003394	rad54b	99	54.153	ENSRNOG00000039949	Rad54b	99	54.153	Rattus_norvegicus
ENSMMOG00000003394	rad54b	99	54.081	ENSRBIG00000020419	-	99	54.081	Rhinopithecus_bieti
ENSMMOG00000003394	rad54b	99	53.972	ENSRROG00000039897	-	99	53.972	Rhinopithecus_roxellana
ENSMMOG00000003394	rad54b	61	41.924	YBR073W	RDH54	77	37.419	Saccharomyces_cerevisiae
ENSMMOG00000003394	rad54b	99	54.289	ENSSBOG00000028501	-	99	54.289	Saimiri_boliviensis_boliviensis
ENSMMOG00000003394	rad54b	99	54.615	ENSSHAG00000017038	-	99	54.615	Sarcophilus_harrisii
ENSMMOG00000003394	rad54b	62	71.612	ENSSFOG00015008483	rad54b	85	71.612	Scleropages_formosus
ENSMMOG00000003394	rad54b	100	78.716	ENSSMAG00000018659	rad54b	100	79.279	Scophthalmus_maximus
ENSMMOG00000003394	rad54b	94	86.392	ENSSDUG00000001122	rad54b	88	86.392	Seriola_dumerili
ENSMMOG00000003394	rad54b	97	87.077	ENSSLDG00000013787	rad54b	92	87.077	Seriola_lalandi_dorsalis
ENSMMOG00000003394	rad54b	99	57.031	ENSSPUG00000016497	-	99	57.031	Sphenodon_punctatus
ENSMMOG00000003394	rad54b	99	81.348	ENSSPAG00000012800	rad54b	99	81.348	Stegastes_partitus
ENSMMOG00000003394	rad54b	99	54.565	ENSSSCG00000006101	-	98	58.564	Sus_scrofa
ENSMMOG00000003394	rad54b	92	59.613	ENSTGUG00000011880	-	88	59.613	Taeniopygia_guttata
ENSMMOG00000003394	rad54b	94	81.862	ENSTRUG00000010015	rad54b	87	81.862	Takifugu_rubripes
ENSMMOG00000003394	rad54b	99	50.652	ENSTTRG00000006312	-	99	50.652	Tursiops_truncatus
ENSMMOG00000003394	rad54b	99	53.871	ENSUMAG00000016401	-	99	53.871	Ursus_maritimus
ENSMMOG00000003394	rad54b	99	54.089	ENSVPAG00000003157	-	99	54.089	Vicugna_pacos
ENSMMOG00000003394	rad54b	99	48.401	ENSXETG00000025924	rad54b	98	51.870	Xenopus_tropicalis
ENSMMOG00000003394	rad54b	99	79.205	ENSXMAG00000013141	rad54b	99	79.205	Xiphophorus_maculatus