EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000003778 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 2787 bases
Position: chrKV751331.1:2717574-2720360
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000004721	Nucleoplasmin	PF03066.15	1.7e-34	1	1
ENSMMOP00000004725	Nucleoplasmin	PF03066.15	7.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000004810	-	549	-	ENSMMOP00000004725	182 (aa)	-	-
ENSMMOT00000004806	-	450	-	ENSMMOP00000004721	149 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000003778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000003778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000003778	npm1b	57	43.529	ENSMMOG00000010681	npm3	52	43.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000003778	npm1b	64	90.625	ENSACIG00000019100	npm1b	57	89.691	Amphilophus_citrinellus
ENSMMOG00000003778	npm1b	99	74.830	ENSACLG00000013812	npm1b	62	74.830	Astatotilapia_calliptera
ENSMMOG00000003778	npm1b	94	72.143	ENSELUG00000022123	npm1b	66	72.973	Esox_lucius
ENSMMOG00000003778	npm1b	92	83.212	ENSLBEG00000001304	-	62	83.099	Labrus_bergylta
ENSMMOG00000003778	npm1b	50	87.838	ENSMZEG00005002840	-	73	87.838	Maylandia_zebra
ENSMMOG00000003778	npm1b	99	75.510	ENSNBRG00000014133	npm1b	71	75.510	Neolamprologus_brichardi
ENSMMOG00000003778	npm1b	92	73.288	ENSPMGG00000008275	npm1b	99	73.288	Periophthalmus_magnuspinnatus
ENSMMOG00000003778	npm1b	63	84.043	ENSPREG00000006780	npm1b	85	72.414	Poecilia_reticulata
ENSMMOG00000003778	npm1b	99	74.830	ENSPNYG00000001427	npm1b	62	74.830	Pundamilia_nyererei