EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000003842 (Gene tree)
Gene ID: -
Gene Symbol: smarcal1
Alias: im:7145331|si:ch211-239d11.1
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 11623 bases
Position: chrKV751321.1:15513266-15524888
Accession: ZDB-GENE-041210-303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000004808	ResIII	PF04851.15	8.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000004894	-	2358	-	ENSMMOP00000004808	785 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000003842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000003842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000003842	smarcal1	79	59.034	ENSG00000138375	SMARCAL1	99	65.217	Homo_sapiens
ENSMMOG00000003842	smarcal1	94	81.197	ENSAPOG00000020156	SMARCAL1	84	81.197	Acanthochromis_polyacanthus
ENSMMOG00000003842	smarcal1	95	78.729	ENSACIG00000001500	smarcal1	97	78.729	Amphilophus_citrinellus
ENSMMOG00000003842	smarcal1	94	76.400	ENSAOCG00000014266	SMARCAL1	94	76.533	Amphiprion_ocellaris
ENSMMOG00000003842	smarcal1	93	82.284	ENSAPEG00000015861	SMARCAL1	86	89.730	Amphiprion_percula
ENSMMOG00000003842	smarcal1	94	77.689	ENSATEG00000020624	SMARCAL1	93	77.689	Anabas_testudineus
ENSMMOG00000003842	smarcal1	86	59.972	ENSAPLG00000009864	SMARCAL1	72	59.972	Anas_platyrhynchos
ENSMMOG00000003842	smarcal1	93	60.499	ENSACAG00000004612	SMARCAL1	92	60.499	Anolis_carolinensis
ENSMMOG00000003842	smarcal1	94	76.330	ENSACLG00000015990	SMARCAL1	93	75.326	Astatotilapia_calliptera
ENSMMOG00000003842	smarcal1	94	62.454	ENSAMXG00000003350	smarcal1	93	62.454	Astyanax_mexicanus
ENSMMOG00000003842	smarcal1	82	62.256	ENSCPBG00000013599	SMARCAL1	67	62.256	Chrysemys_picta_bellii
ENSMMOG00000003842	smarcal1	78	48.000	ENSCING00000009308	-	100	48.000	Ciona_intestinalis
ENSMMOG00000003842	smarcal1	98	72.477	ENSCSEG00000010785	SMARCAL1	98	72.477	Cynoglossus_semilaevis
ENSMMOG00000003842	smarcal1	94	69.166	ENSCVAG00000018780	SMARCAL1	93	69.166	Cyprinodon_variegatus
ENSMMOG00000003842	smarcal1	64	52.091	ENSEBUG00000011906	SMARCAL1	72	52.091	Eptatretus_burgeri
ENSMMOG00000003842	smarcal1	81	72.340	ENSELUG00000010440	-	78	67.068	Esox_lucius
ENSMMOG00000003842	smarcal1	86	58.773	ENSFALG00000003981	SMARCAL1	72	58.941	Ficedula_albicollis
ENSMMOG00000003842	smarcal1	94	69.502	ENSFHEG00000008380	SMARCAL1	93	69.502	Fundulus_heteroclitus
ENSMMOG00000003842	smarcal1	74	70.449	ENSGMOG00000010034	smarcal1	100	65.042	Gadus_morhua
ENSMMOG00000003842	smarcal1	98	58.074	ENSGALG00000011475	RPL37A	96	58.074	Gallus_gallus
ENSMMOG00000003842	smarcal1	91	76.114	ENSGACG00000006073	SMARCAL1	99	81.308	Gasterosteus_aculeatus
ENSMMOG00000003842	smarcal1	83	61.218	ENSGAGG00000015660	SMARCAL1	73	61.367	Gopherus_agassizii
ENSMMOG00000003842	smarcal1	94	77.446	ENSHBUG00000002973	smarcal1	93	77.446	Haplochromis_burtoni
ENSMMOG00000003842	smarcal1	94	68.596	ENSHCOG00000017921	smarcal1	95	68.596	Hippocampus_comes
ENSMMOG00000003842	smarcal1	93	77.273	ENSKMAG00000012023	SMARCAL1	96	67.913	Kryptolebias_marmoratus
ENSMMOG00000003842	smarcal1	92	77.964	ENSLBEG00000003493	smarcal1	91	77.964	Labrus_bergylta
ENSMMOG00000003842	smarcal1	95	76.834	ENSLBEG00000022915	smarcal1	99	76.834	Labrus_bergylta
ENSMMOG00000003842	smarcal1	87	55.076	ENSLACG00000010974	SMARCAL1	79	52.679	Latimeria_chalumnae
ENSMMOG00000003842	smarcal1	81	71.037	ENSLOCG00000009637	smarcal1	78	71.037	Lepisosteus_oculatus
ENSMMOG00000003842	smarcal1	94	73.798	ENSMAMG00000000828	SMARCAL1	95	73.798	Mastacembelus_armatus
ENSMMOG00000003842	smarcal1	94	76.197	ENSMZEG00005007660	SMARCAL1	93	75.196	Maylandia_zebra
ENSMMOG00000003842	smarcal1	91	56.622	ENSMGAG00000011658	SMARCAL1	78	56.757	Meleagris_gallopavo
ENSMMOG00000003842	smarcal1	90	55.830	ENSMODG00000015544	SMARCAL1	75	55.830	Monodelphis_domestica
ENSMMOG00000003842	smarcal1	95	77.763	ENSNBRG00000016273	smarcal1	98	77.763	Neolamprologus_brichardi
ENSMMOG00000003842	smarcal1	80	61.624	ENSMEUG00000004395	SMARCAL1	74	60.890	Notamacropus_eugenii
ENSMMOG00000003842	smarcal1	94	76.197	ENSONIG00000009036	smarcal1	95	80.769	Oreochromis_niloticus
ENSMMOG00000003842	smarcal1	94	70.510	ENSORLG00000016455	SMARCAL1	92	70.510	Oryzias_latipes
ENSMMOG00000003842	smarcal1	94	70.290	ENSORLG00020001610	SMARCAL1	92	70.510	Oryzias_latipes_hni
ENSMMOG00000003842	smarcal1	94	70.652	ENSORLG00015001865	SMARCAL1	92	70.752	Oryzias_latipes_hsok
ENSMMOG00000003842	smarcal1	94	72.647	ENSOMEG00000001845	smarcal1	92	72.647	Oryzias_melastigma
ENSMMOG00000003842	smarcal1	93	71.323	ENSPMGG00000019092	SMARCAL1	91	71.429	Periophthalmus_magnuspinnatus
ENSMMOG00000003842	smarcal1	88	57.203	ENSPCIG00000022514	SMARCAL1	78	57.303	Phascolarctos_cinereus
ENSMMOG00000003842	smarcal1	94	76.801	ENSPFOG00000000560	SMARCAL1	93	69.258	Poecilia_formosa
ENSMMOG00000003842	smarcal1	94	76.801	ENSPMEG00000018146	SMARCAL1	93	69.258	Poecilia_mexicana
ENSMMOG00000003842	smarcal1	60	81.755	ENSPREG00000009591	SMARCAL1	88	81.755	Poecilia_reticulata
ENSMMOG00000003842	smarcal1	94	62.545	ENSPNAG00000014900	smarcal1	88	62.805	Pygocentrus_nattereri
ENSMMOG00000003842	smarcal1	93	57.674	ENSSHAG00000013538	SMARCAL1	91	55.378	Sarcophilus_harrisii
ENSMMOG00000003842	smarcal1	94	76.622	ENSSMAG00000010427	SMARCAL1	93	76.622	Scophthalmus_maximus
ENSMMOG00000003842	smarcal1	94	78.997	ENSSDUG00000017470	SMARCAL1	86	78.997	Seriola_dumerili
ENSMMOG00000003842	smarcal1	94	78.726	ENSSLDG00000007224	SMARCAL1	87	78.726	Seriola_lalandi_dorsalis
ENSMMOG00000003842	smarcal1	87	60.171	ENSSPUG00000015369	SMARCAL1	68	60.171	Sphenodon_punctatus
ENSMMOG00000003842	smarcal1	95	78.378	ENSSPAG00000003742	smarcal1	99	78.378	Stegastes_partitus
ENSMMOG00000003842	smarcal1	80	55.882	ENSSSCG00000035501	SMARCAL1	72	56.192	Sus_scrofa
ENSMMOG00000003842	smarcal1	81	59.356	ENSTGUG00000005079	SMARCAL1	96	59.356	Taeniopygia_guttata
ENSMMOG00000003842	smarcal1	94	66.416	ENSTRUG00000010701	SMARCAL1	92	66.416	Takifugu_rubripes
ENSMMOG00000003842	smarcal1	94	49.317	ENSTTRG00000009001	SMARCAL1	92	49.317	Tursiops_truncatus
ENSMMOG00000003842	smarcal1	82	64.910	ENSXETG00000000465	smarcal1	70	64.910	Xenopus_tropicalis