EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000004390 (Gene tree)
Gene ID: -
Gene Symbol: lig4
Alias: zgc:165595
Full Name: ligase IV%2C DNA%2C ATP-dependent
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 3918 bases
Position: chrKV751358.1:849754-853671
Accession: ZDB-GENE-070820-10
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000005575	RNA_ligase	PF09414.10	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000005674	-	2724	-	ENSMMOP00000005575	907 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000004390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000004390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000004390	lig4	99	65.670	ENSG00000174405	LIG4	100	65.995	Homo_sapiens
ENSMMOG00000004390	lig4	100	88.791	ENSAPOG00000000866	lig4	100	88.791	Acanthochromis_polyacanthus
ENSMMOG00000004390	lig4	99	63.606	ENSAMEG00000019685	LIG4	99	63.606	Ailuropoda_melanoleuca
ENSMMOG00000004390	lig4	100	87.802	ENSACIG00000018309	lig4	100	87.802	Amphilophus_citrinellus
ENSMMOG00000004390	lig4	100	88.571	ENSAOCG00000011768	lig4	100	88.571	Amphiprion_ocellaris
ENSMMOG00000004390	lig4	100	88.791	ENSAPEG00000017815	lig4	100	88.791	Amphiprion_percula
ENSMMOG00000004390	lig4	100	88.132	ENSATEG00000005583	lig4	100	88.132	Anabas_testudineus
ENSMMOG00000004390	lig4	96	66.438	ENSAPLG00000001673	LIG4	99	66.438	Anas_platyrhynchos
ENSMMOG00000004390	lig4	99	66.334	ENSACAG00000014566	LIG4	99	66.334	Anolis_carolinensis
ENSMMOG00000004390	lig4	99	65.006	ENSANAG00000012446	LIG4	99	65.006	Aotus_nancymaae
ENSMMOG00000004390	lig4	100	86.813	ENSACLG00000027051	lig4	100	86.813	Astatotilapia_calliptera
ENSMMOG00000004390	lig4	100	77.972	ENSAMXG00000008192	lig4	95	77.972	Astyanax_mexicanus
ENSMMOG00000004390	lig4	99	64.452	ENSBTAG00000015868	LIG4	99	64.452	Bos_taurus
ENSMMOG00000004390	lig4	99	65.006	ENSCJAG00000014689	LIG4	99	65.006	Callithrix_jacchus
ENSMMOG00000004390	lig4	99	64.230	ENSCAFG00000006031	LIG4	99	64.452	Canis_familiaris
ENSMMOG00000004390	lig4	99	64.230	ENSCAFG00020021230	LIG4	99	64.452	Canis_lupus_dingo
ENSMMOG00000004390	lig4	99	64.230	ENSCHIG00000001019	LIG4	99	64.230	Capra_hircus
ENSMMOG00000004390	lig4	99	64.009	ENSCAPG00000006284	LIG4	99	64.009	Cavia_aperea
ENSMMOG00000004390	lig4	99	63.898	ENSCPOG00000014266	LIG4	99	63.898	Cavia_porcellus
ENSMMOG00000004390	lig4	99	65.227	ENSCCAG00000019971	LIG4	99	65.227	Cebus_capucinus
ENSMMOG00000004390	lig4	99	65.165	ENSCATG00000021075	LIG4	99	65.165	Cercocebus_atys
ENSMMOG00000004390	lig4	99	64.537	ENSCLAG00000003376	LIG4	99	64.537	Chinchilla_lanigera
ENSMMOG00000004390	lig4	99	65.116	ENSCSAG00000000211	LIG4	99	65.116	Chlorocebus_sabaeus
ENSMMOG00000004390	lig4	99	67.814	ENSCPBG00000023291	LIG4	100	66.958	Chrysemys_picta_bellii
ENSMMOG00000004390	lig4	69	47.235	ENSCING00000009536	-	96	47.235	Ciona_intestinalis
ENSMMOG00000004390	lig4	83	44.459	ENSCSAVG00000010336	-	98	44.459	Ciona_savignyi
ENSMMOG00000004390	lig4	99	65.227	ENSCANG00000005805	LIG4	99	65.227	Colobus_angolensis_palliatus
ENSMMOG00000004390	lig4	99	63.938	ENSCGRG00001012072	Lig4	99	63.938	Cricetulus_griseus_chok1gshd
ENSMMOG00000004390	lig4	99	63.938	ENSCGRG00000013417	Lig4	99	63.938	Cricetulus_griseus_crigri
ENSMMOG00000004390	lig4	97	83.878	ENSCSEG00000013905	lig4	96	83.878	Cynoglossus_semilaevis
ENSMMOG00000004390	lig4	100	87.047	ENSCVAG00000007896	lig4	100	87.047	Cyprinodon_variegatus
ENSMMOG00000004390	lig4	100	77.473	ENSDARG00000060620	lig4	100	77.473	Danio_rerio
ENSMMOG00000004390	lig4	99	63.938	ENSDNOG00000000513	LIG4	99	64.823	Dasypus_novemcinctus
ENSMMOG00000004390	lig4	99	65.006	ENSDORG00000027303	Lig4	99	65.006	Dipodomys_ordii
ENSMMOG00000004390	lig4	86	31.470	FBgn0030506	Lig4	88	31.470	Drosophila_melanogaster
ENSMMOG00000004390	lig4	98	62.639	ENSETEG00000015563	LIG4	100	63.193	Echinops_telfairi
ENSMMOG00000004390	lig4	99	45.090	ENSEBUG00000014243	lig4	99	44.984	Eptatretus_burgeri
ENSMMOG00000004390	lig4	99	64.009	ENSEASG00005022073	LIG4	99	64.009	Equus_asinus_asinus
ENSMMOG00000004390	lig4	99	63.898	ENSECAG00000003257	LIG4	99	63.898	Equus_caballus
ENSMMOG00000004390	lig4	98	81.535	ENSELUG00000006787	lig4	99	81.535	Esox_lucius
ENSMMOG00000004390	lig4	99	63.787	ENSFCAG00000031985	LIG4	99	63.787	Felis_catus
ENSMMOG00000004390	lig4	87	68.176	ENSFALG00000004214	LIG4	97	68.176	Ficedula_albicollis
ENSMMOG00000004390	lig4	99	64.341	ENSFDAG00000008973	LIG4	99	64.341	Fukomys_damarensis
ENSMMOG00000004390	lig4	100	86.608	ENSFHEG00000007398	lig4	91	86.608	Fundulus_heteroclitus
ENSMMOG00000004390	lig4	85	78.295	ENSGMOG00000012843	lig4	99	78.811	Gadus_morhua
ENSMMOG00000004390	lig4	99	65.628	ENSGALG00000016854	LIG4	99	65.628	Gallus_gallus
ENSMMOG00000004390	lig4	99	85.104	ENSGAFG00000019779	lig4	96	85.104	Gambusia_affinis
ENSMMOG00000004390	lig4	99	85.430	ENSGACG00000014135	lig4	99	85.430	Gasterosteus_aculeatus
ENSMMOG00000004390	lig4	99	65.449	ENSGGOG00000027771	LIG4	99	65.449	Gorilla_gorilla
ENSMMOG00000004390	lig4	100	86.703	ENSHBUG00000006245	lig4	100	86.703	Haplochromis_burtoni
ENSMMOG00000004390	lig4	99	64.563	ENSHGLG00000000718	LIG4	99	64.563	Heterocephalus_glaber_female
ENSMMOG00000004390	lig4	99	64.563	ENSHGLG00100003265	LIG4	99	64.563	Heterocephalus_glaber_male
ENSMMOG00000004390	lig4	100	82.088	ENSHCOG00000012010	lig4	100	82.088	Hippocampus_comes
ENSMMOG00000004390	lig4	100	76.923	ENSIPUG00000013748	lig4	100	76.923	Ictalurus_punctatus
ENSMMOG00000004390	lig4	99	64.563	ENSSTOG00000024303	LIG4	99	64.563	Ictidomys_tridecemlineatus
ENSMMOG00000004390	lig4	99	63.787	ENSJJAG00000006750	Lig4	99	63.787	Jaculus_jaculus
ENSMMOG00000004390	lig4	100	84.725	ENSKMAG00000001149	lig4	100	84.725	Kryptolebias_marmoratus
ENSMMOG00000004390	lig4	91	89.480	ENSLBEG00000014578	lig4	100	89.480	Labrus_bergylta
ENSMMOG00000004390	lig4	100	66.447	ENSLACG00000003282	LIG4	100	66.447	Latimeria_chalumnae
ENSMMOG00000004390	lig4	100	71.961	ENSLOCG00000008901	lig4	99	71.961	Lepisosteus_oculatus
ENSMMOG00000004390	lig4	99	63.355	ENSLAFG00000031152	LIG4	99	63.355	Loxodonta_africana
ENSMMOG00000004390	lig4	99	65.227	ENSMFAG00000037235	LIG4	99	65.227	Macaca_fascicularis
ENSMMOG00000004390	lig4	99	65.116	ENSMMUG00000008874	LIG4	99	65.116	Macaca_mulatta
ENSMMOG00000004390	lig4	99	65.227	ENSMNEG00000023575	LIG4	99	65.227	Macaca_nemestrina
ENSMMOG00000004390	lig4	99	65.006	ENSMLEG00000026720	LIG4	99	65.006	Mandrillus_leucophaeus
ENSMMOG00000004390	lig4	100	88.242	ENSMAMG00000008472	lig4	99	88.242	Mastacembelus_armatus
ENSMMOG00000004390	lig4	100	86.813	ENSMZEG00005001855	lig4	100	86.813	Maylandia_zebra
ENSMMOG00000004390	lig4	99	65.628	ENSMGAG00000015532	LIG4	99	65.628	Meleagris_gallopavo
ENSMMOG00000004390	lig4	99	63.012	ENSMOCG00000019000	Lig4	99	63.012	Microtus_ochrogaster
ENSMMOG00000004390	lig4	99	64.615	ENSMODG00000025064	LIG4	99	64.615	Monodelphis_domestica
ENSMMOG00000004390	lig4	100	87.363	ENSMALG00000008555	lig4	100	87.363	Monopterus_albus
ENSMMOG00000004390	lig4	99	64.120	MGP_CAROLIEiJ_G0030809	Lig4	99	64.009	Mus_caroli
ENSMMOG00000004390	lig4	99	64.120	ENSMUSG00000049717	Lig4	99	64.009	Mus_musculus
ENSMMOG00000004390	lig4	99	64.009	MGP_PahariEiJ_G0021270	Lig4	99	64.009	Mus_pahari
ENSMMOG00000004390	lig4	99	64.452	MGP_SPRETEiJ_G0031917	Lig4	99	64.341	Mus_spretus
ENSMMOG00000004390	lig4	99	64.159	ENSMPUG00000018675	LIG4	99	64.159	Mustela_putorius_furo
ENSMMOG00000004390	lig4	99	64.120	ENSMLUG00000001267	LIG4	99	64.120	Myotis_lucifugus
ENSMMOG00000004390	lig4	99	64.009	ENSNGAG00000013258	Lig4	99	63.898	Nannospalax_galili
ENSMMOG00000004390	lig4	100	86.813	ENSNBRG00000021252	lig4	100	86.813	Neolamprologus_brichardi
ENSMMOG00000004390	lig4	99	64.673	ENSNLEG00000007888	LIG4	99	64.673	Nomascus_leucogenys
ENSMMOG00000004390	lig4	99	63.898	ENSOPRG00000005765	LIG4	99	63.898	Ochotona_princeps
ENSMMOG00000004390	lig4	99	63.938	ENSODEG00000019683	LIG4	99	63.938	Octodon_degus
ENSMMOG00000004390	lig4	100	86.923	ENSONIG00000011969	lig4	99	86.923	Oreochromis_niloticus
ENSMMOG00000004390	lig4	99	64.341	ENSOCUG00000015734	LIG4	99	64.341	Oryctolagus_cuniculus
ENSMMOG00000004390	lig4	99	84.320	ENSORLG00000004041	lig4	99	84.320	Oryzias_latipes
ENSMMOG00000004390	lig4	99	84.211	ENSORLG00020019607	lig4	99	84.211	Oryzias_latipes_hni
ENSMMOG00000004390	lig4	99	84.430	ENSORLG00015017754	lig4	99	84.430	Oryzias_latipes_hsok
ENSMMOG00000004390	lig4	75	88.759	ENSOMEG00000003459	lig4	99	88.759	Oryzias_melastigma
ENSMMOG00000004390	lig4	98	65.299	ENSOGAG00000032120	LIG4	99	65.299	Otolemur_garnettii
ENSMMOG00000004390	lig4	82	68.048	ENSOARG00000005590	LIG4	99	68.048	Ovis_aries
ENSMMOG00000004390	lig4	99	65.449	ENSPPAG00000032998	LIG4	99	65.449	Pan_paniscus
ENSMMOG00000004390	lig4	99	63.898	ENSPPRG00000017804	LIG4	99	63.898	Panthera_pardus
ENSMMOG00000004390	lig4	99	64.009	ENSPTIG00000010051	LIG4	99	64.009	Panthera_tigris_altaica
ENSMMOG00000004390	lig4	99	65.559	ENSPTRG00000006025	LIG4	99	65.559	Pan_troglodytes
ENSMMOG00000004390	lig4	99	65.275	ENSPANG00000007562	LIG4	99	65.275	Papio_anubis
ENSMMOG00000004390	lig4	99	77.058	ENSPKIG00000011645	lig4	98	77.058	Paramormyrops_kingsleyae
ENSMMOG00000004390	lig4	100	66.776	ENSPSIG00000001504	LIG4	100	66.776	Pelodiscus_sinensis
ENSMMOG00000004390	lig4	98	80.313	ENSPMGG00000013486	lig4	100	79.672	Periophthalmus_magnuspinnatus
ENSMMOG00000004390	lig4	99	63.164	ENSPEMG00000000076	Lig4	99	63.053	Peromyscus_maniculatus_bairdii
ENSMMOG00000004390	lig4	99	64.159	ENSPCIG00000021882	LIG4	99	64.159	Phascolarctos_cinereus
ENSMMOG00000004390	lig4	100	86.184	ENSPFOG00000000797	lig4	100	86.184	Poecilia_formosa
ENSMMOG00000004390	lig4	100	86.075	ENSPLAG00000001196	lig4	100	86.075	Poecilia_latipinna
ENSMMOG00000004390	lig4	100	86.075	ENSPMEG00000021353	lig4	100	86.184	Poecilia_mexicana
ENSMMOG00000004390	lig4	100	85.417	ENSPREG00000007323	lig4	100	85.526	Poecilia_reticulata
ENSMMOG00000004390	lig4	99	64.895	ENSPPYG00000005540	LIG4	99	64.895	Pongo_abelii
ENSMMOG00000004390	lig4	99	64.230	ENSPVAG00000016403	LIG4	99	64.230	Pteropus_vampyrus
ENSMMOG00000004390	lig4	100	86.813	ENSPNYG00000009660	lig4	100	86.813	Pundamilia_nyererei
ENSMMOG00000004390	lig4	99	80.156	ENSPNAG00000028069	LIG4	99	80.156	Pygocentrus_nattereri
ENSMMOG00000004390	lig4	99	80.156	ENSPNAG00000028056	lig4	99	80.156	Pygocentrus_nattereri
ENSMMOG00000004390	lig4	99	63.566	ENSRNOG00000014605	Lig4	99	63.455	Rattus_norvegicus
ENSMMOG00000004390	lig4	99	64.452	ENSRBIG00000039962	LIG4	99	64.452	Rhinopithecus_bieti
ENSMMOG00000004390	lig4	99	65.338	ENSRROG00000006040	LIG4	99	65.338	Rhinopithecus_roxellana
ENSMMOG00000004390	lig4	99	65.006	ENSSBOG00000019029	LIG4	99	65.006	Saimiri_boliviensis_boliviensis
ENSMMOG00000004390	lig4	99	61.905	ENSSHAG00000009525	LIG4	99	61.905	Sarcophilus_harrisii
ENSMMOG00000004390	lig4	100	78.022	ENSSFOG00015012835	lig4	100	78.022	Scleropages_formosus
ENSMMOG00000004390	lig4	100	82.527	ENSSMAG00000011267	lig4	100	82.527	Scophthalmus_maximus
ENSMMOG00000004390	lig4	100	87.856	ENSSDUG00000010343	lig4	100	87.856	Seriola_dumerili
ENSMMOG00000004390	lig4	100	86.324	ENSSLDG00000003239	lig4	100	86.433	Seriola_lalandi_dorsalis
ENSMMOG00000004390	lig4	99	63.586	ENSSARG00000006573	LIG4	99	63.586	Sorex_araneus
ENSMMOG00000004390	lig4	92	67.857	ENSSPUG00000002444	LIG4	100	67.857	Sphenodon_punctatus
ENSMMOG00000004390	lig4	100	88.462	ENSSPAG00000001609	lig4	100	88.462	Stegastes_partitus
ENSMMOG00000004390	lig4	99	64.191	ENSSSCG00000009540	LIG4	99	64.191	Sus_scrofa
ENSMMOG00000004390	lig4	99	65.295	ENSTGUG00000010795	LIG4	99	65.295	Taeniopygia_guttata
ENSMMOG00000004390	lig4	100	87.582	ENSTRUG00000009984	lig4	100	87.582	Takifugu_rubripes
ENSMMOG00000004390	lig4	100	84.286	ENSTNIG00000010348	lig4	100	84.505	Tetraodon_nigroviridis
ENSMMOG00000004390	lig4	99	64.341	ENSTBEG00000017741	LIG4	99	64.341	Tupaia_belangeri
ENSMMOG00000004390	lig4	99	63.898	ENSTTRG00000012660	LIG4	99	63.898	Tursiops_truncatus
ENSMMOG00000004390	lig4	99	63.164	ENSUAMG00000003773	LIG4	99	63.164	Ursus_americanus
ENSMMOG00000004390	lig4	100	65.570	ENSXETG00000002654	lig4	100	65.570	Xenopus_tropicalis
ENSMMOG00000004390	lig4	100	85.855	ENSXCOG00000017401	lig4	100	85.855	Xiphophorus_couchianus
ENSMMOG00000004390	lig4	100	86.184	ENSXMAG00000015142	lig4	99	86.184	Xiphophorus_maculatus