EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000005203 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat containing 6C1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 12378 bases
Position: chrKV751340.1:882302-894679
Accession: ZDB-GENE-030131-7440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000006661	RRM_1	PF00076.22	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000006785	-	4695	-	ENSMMOP00000006661	1564 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000005203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000005203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000005203	tnrc6c1	100	50.678	ENSG00000078687	TNRC6C	100	56.034	Homo_sapiens
ENSMMOG00000005203	tnrc6c1	100	84.830	ENSAPOG00000019749	tnrc6c1	94	86.006	Acanthochromis_polyacanthus
ENSMMOG00000005203	tnrc6c1	97	48.495	ENSAMEG00000013756	TNRC6C	76	52.394	Ailuropoda_melanoleuca
ENSMMOG00000005203	tnrc6c1	100	76.562	ENSACIG00000008075	tnrc6c1	93	76.823	Amphilophus_citrinellus
ENSMMOG00000005203	tnrc6c1	100	84.839	ENSAOCG00000023968	tnrc6c1	94	85.767	Amphiprion_ocellaris
ENSMMOG00000005203	tnrc6c1	100	84.839	ENSAPEG00000009020	tnrc6c1	94	85.767	Amphiprion_percula
ENSMMOG00000005203	tnrc6c1	97	50.227	ENSAPLG00000005456	TNRC6C	71	54.225	Anas_platyrhynchos
ENSMMOG00000005203	tnrc6c1	97	50.629	ENSACAG00000016198	TNRC6C	70	55.235	Anolis_carolinensis
ENSMMOG00000005203	tnrc6c1	100	50.594	ENSANAG00000021554	TNRC6C	93	55.299	Aotus_nancymaae
ENSMMOG00000005203	tnrc6c1	100	75.257	ENSACLG00000000424	tnrc6c1	93	75.439	Astatotilapia_calliptera
ENSMMOG00000005203	tnrc6c1	83	53.324	ENSBTAG00000018658	TNRC6C	79	55.180	Bos_taurus
ENSMMOG00000005203	tnrc6c1	100	50.368	ENSCJAG00000019431	TNRC6C	93	55.419	Callithrix_jacchus
ENSMMOG00000005203	tnrc6c1	97	49.574	ENSCAFG00000005224	TNRC6C	77	51.862	Canis_familiaris
ENSMMOG00000005203	tnrc6c1	97	50.405	ENSCAFG00020006661	TNRC6C	78	54.173	Canis_lupus_dingo
ENSMMOG00000005203	tnrc6c1	97	50.263	ENSCHIG00000026004	TNRC6C	93	54.513	Capra_hircus
ENSMMOG00000005203	tnrc6c1	100	49.834	ENSTSYG00000005403	TNRC6C	79	54.316	Carlito_syrichta
ENSMMOG00000005203	tnrc6c1	78	52.237	ENSCAPG00000007307	TNRC6C	82	50.791	Cavia_aperea
ENSMMOG00000005203	tnrc6c1	78	56.784	ENSCPOG00000000467	TNRC6C	89	55.740	Cavia_porcellus
ENSMMOG00000005203	tnrc6c1	100	50.678	ENSCCAG00000030524	TNRC6C	93	55.724	Cebus_capucinus
ENSMMOG00000005203	tnrc6c1	100	50.480	ENSCATG00000033135	TNRC6C	79	55.899	Cercocebus_atys
ENSMMOG00000005203	tnrc6c1	100	50.959	ENSCLAG00000011139	TNRC6C	82	56.340	Chinchilla_lanigera
ENSMMOG00000005203	tnrc6c1	100	49.418	ENSCSAG00000005167	TNRC6C	70	54.565	Chlorocebus_sabaeus
ENSMMOG00000005203	tnrc6c1	67	64.506	ENSCHOG00000000088	TNRC6C	51	64.451	Choloepus_hoffmanni
ENSMMOG00000005203	tnrc6c1	97	52.306	ENSCPBG00000027960	TNRC6C	79	56.957	Chrysemys_picta_bellii
ENSMMOG00000005203	tnrc6c1	100	50.593	ENSCANG00000041771	TNRC6C	79	55.971	Colobus_angolensis_palliatus
ENSMMOG00000005203	tnrc6c1	100	49.972	ENSCGRG00001022686	Tnrc6c	78	53.907	Cricetulus_griseus_chok1gshd
ENSMMOG00000005203	tnrc6c1	100	50.170	ENSCGRG00000018041	Tnrc6c	78	53.907	Cricetulus_griseus_crigri
ENSMMOG00000005203	tnrc6c1	100	78.899	ENSCSEG00000012744	tnrc6c1	90	78.837	Cynoglossus_semilaevis
ENSMMOG00000005203	tnrc6c1	99	61.925	ENSDARG00000076847	tnrc6c1	99	60.520	Danio_rerio
ENSMMOG00000005203	tnrc6c1	97	49.477	ENSDNOG00000003247	TNRC6C	72	53.647	Dasypus_novemcinctus
ENSMMOG00000005203	tnrc6c1	97	48.893	ENSDORG00000004558	Tnrc6c	78	53.048	Dipodomys_ordii
ENSMMOG00000005203	tnrc6c1	91	55.772	ENSETEG00000005527	TNRC6C	76	56.334	Echinops_telfairi
ENSMMOG00000005203	tnrc6c1	97	50.698	ENSEASG00005004799	TNRC6C	93	55.780	Equus_asinus_asinus
ENSMMOG00000005203	tnrc6c1	97	50.698	ENSECAG00000012486	TNRC6C	83	55.780	Equus_caballus
ENSMMOG00000005203	tnrc6c1	93	55.556	ENSEEUG00000010008	TNRC6C	72	55.427	Erinaceus_europaeus
ENSMMOG00000005203	tnrc6c1	100	49.295	ENSFCAG00000028358	TNRC6C	79	54.304	Felis_catus
ENSMMOG00000005203	tnrc6c1	97	49.106	ENSFALG00000000848	TNRC6C	78	53.686	Ficedula_albicollis
ENSMMOG00000005203	tnrc6c1	100	51.272	ENSFDAG00000010368	TNRC6C	76	56.453	Fukomys_damarensis
ENSMMOG00000005203	tnrc6c1	100	78.589	ENSFHEG00000002936	tnrc6c1	94	76.891	Fundulus_heteroclitus
ENSMMOG00000005203	tnrc6c1	97	52.364	ENSGALG00000001725	TNRC6C	77	57.352	Gallus_gallus
ENSMMOG00000005203	tnrc6c1	100	79.221	ENSGAFG00000019019	tnrc6c1	100	79.468	Gambusia_affinis
ENSMMOG00000005203	tnrc6c1	100	76.890	ENSGACG00000012320	tnrc6c1	88	77.538	Gasterosteus_aculeatus
ENSMMOG00000005203	tnrc6c1	97	53.008	ENSGAGG00000022043	TNRC6C	75	56.844	Gopherus_agassizii
ENSMMOG00000005203	tnrc6c1	100	50.452	ENSGGOG00000011304	TNRC6C	93	55.436	Gorilla_gorilla
ENSMMOG00000005203	tnrc6c1	100	80.470	ENSHBUG00000010846	tnrc6c1	100	79.975	Haplochromis_burtoni
ENSMMOG00000005203	tnrc6c1	100	50.536	ENSHGLG00000004809	TNRC6C	70	55.980	Heterocephalus_glaber_female
ENSMMOG00000005203	tnrc6c1	100	50.169	ENSHGLG00100012597	TNRC6C	70	55.118	Heterocephalus_glaber_male
ENSMMOG00000005203	tnrc6c1	100	62.583	ENSIPUG00000000818	tnrc6c1	89	63.088	Ictalurus_punctatus
ENSMMOG00000005203	tnrc6c1	83	55.524	ENSSTOG00000009101	TNRC6C	76	55.931	Ictidomys_tridecemlineatus
ENSMMOG00000005203	tnrc6c1	100	50.028	ENSJJAG00000017055	Tnrc6c	70	55.187	Jaculus_jaculus
ENSMMOG00000005203	tnrc6c1	100	77.722	ENSKMAG00000021023	tnrc6c1	100	78.335	Kryptolebias_marmoratus
ENSMMOG00000005203	tnrc6c1	100	48.041	ENSLACG00000015283	TNRC6C	75	52.662	Latimeria_chalumnae
ENSMMOG00000005203	tnrc6c1	97	69.074	ENSLOCG00000013377	tnrc6c1	89	61.824	Lepisosteus_oculatus
ENSMMOG00000005203	tnrc6c1	100	48.681	ENSLAFG00000011122	TNRC6C	75	53.896	Loxodonta_africana
ENSMMOG00000005203	tnrc6c1	100	50.480	ENSMFAG00000043943	TNRC6C	79	55.899	Macaca_fascicularis
ENSMMOG00000005203	tnrc6c1	100	50.480	ENSMMUG00000011924	TNRC6C	79	55.899	Macaca_mulatta
ENSMMOG00000005203	tnrc6c1	100	50.423	ENSMNEG00000030405	TNRC6C	79	55.827	Macaca_nemestrina
ENSMMOG00000005203	tnrc6c1	100	50.480	ENSMLEG00000033436	TNRC6C	79	55.899	Mandrillus_leucophaeus
ENSMMOG00000005203	tnrc6c1	100	82.116	ENSMAMG00000023613	tnrc6c1	100	79.681	Mastacembelus_armatus
ENSMMOG00000005203	tnrc6c1	100	80.446	ENSMZEG00005010920	tnrc6c1	94	78.826	Maylandia_zebra
ENSMMOG00000005203	tnrc6c1	97	47.260	ENSMGAG00000003906	TNRC6C	70	49.716	Meleagris_gallopavo
ENSMMOG00000005203	tnrc6c1	100	49.775	ENSMAUG00000021618	Tnrc6c	79	54.265	Mesocricetus_auratus
ENSMMOG00000005203	tnrc6c1	100	50.254	ENSMICG00000003952	TNRC6C	79	55.436	Microcebus_murinus
ENSMMOG00000005203	tnrc6c1	100	50.226	ENSMOCG00000015879	Tnrc6c	76	55.403	Microtus_ochrogaster
ENSMMOG00000005203	tnrc6c1	97	51.654	ENSMODG00000001785	TNRC6C	70	55.740	Monodelphis_domestica
ENSMMOG00000005203	tnrc6c1	100	49.492	MGP_CAROLIEiJ_G0017465	Tnrc6c	76	55.371	Mus_caroli
ENSMMOG00000005203	tnrc6c1	97	50.203	ENSMUSG00000025571	Tnrc6c	76	55.227	Mus_musculus
ENSMMOG00000005203	tnrc6c1	100	49.916	MGP_PahariEiJ_G0018593	Tnrc6c	76	55.299	Mus_pahari
ENSMMOG00000005203	tnrc6c1	97	50.029	MGP_SPRETEiJ_G0018309	Tnrc6c	76	55.011	Mus_spretus
ENSMMOG00000005203	tnrc6c1	100	49.007	ENSMPUG00000013348	TNRC6C	69	53.338	Mustela_putorius_furo
ENSMMOG00000005203	tnrc6c1	97	48.121	ENSMLUG00000014431	TNRC6C	70	51.779	Myotis_lucifugus
ENSMMOG00000005203	tnrc6c1	100	49.888	ENSNGAG00000012203	Tnrc6c	70	54.454	Nannospalax_galili
ENSMMOG00000005203	tnrc6c1	100	80.705	ENSNBRG00000005344	tnrc6c1	94	80.581	Neolamprologus_brichardi
ENSMMOG00000005203	tnrc6c1	100	47.896	ENSNLEG00000000047	TNRC6C	83	52.034	Nomascus_leucogenys
ENSMMOG00000005203	tnrc6c1	92	66.318	ENSMEUG00000005104	TNRC6C	71	65.909	Notamacropus_eugenii
ENSMMOG00000005203	tnrc6c1	100	51.015	ENSODEG00000012499	TNRC6C	92	56.371	Octodon_degus
ENSMMOG00000005203	tnrc6c1	100	80.817	ENSONIG00000002210	tnrc6c1	100	80.817	Oreochromis_niloticus
ENSMMOG00000005203	tnrc6c1	77	53.906	ENSOANG00000009758	-	67	54.700	Ornithorhynchus_anatinus
ENSMMOG00000005203	tnrc6c1	100	75.571	ENSORLG00000009837	tnrc6c1	100	86.447	Oryzias_latipes
ENSMMOG00000005203	tnrc6c1	100	75.262	ENSORLG00020016510	tnrc6c1	100	75.817	Oryzias_latipes_hni
ENSMMOG00000005203	tnrc6c1	78	71.969	ENSORLG00015000171	tnrc6c1	98	72.283	Oryzias_latipes_hsok
ENSMMOG00000005203	tnrc6c1	100	76.314	ENSOMEG00000000357	tnrc6c1	94	76.340	Oryzias_melastigma
ENSMMOG00000005203	tnrc6c1	97	48.542	ENSOGAG00000007197	TNRC6C	93	52.854	Otolemur_garnettii
ENSMMOG00000005203	tnrc6c1	93	47.760	ENSOARG00000006041	TNRC6C	79	51.799	Ovis_aries
ENSMMOG00000005203	tnrc6c1	100	50.621	ENSPPAG00000027160	TNRC6C	93	55.652	Pan_paniscus
ENSMMOG00000005203	tnrc6c1	100	49.408	ENSPPRG00000018881	TNRC6C	79	54.376	Panthera_pardus
ENSMMOG00000005203	tnrc6c1	87	56.413	ENSPTIG00000008791	TNRC6C	78	43.816	Panthera_tigris_altaica
ENSMMOG00000005203	tnrc6c1	100	50.678	ENSPTRG00000009699	TNRC6C	93	55.724	Pan_troglodytes
ENSMMOG00000005203	tnrc6c1	100	50.622	ENSPANG00000019994	TNRC6C	79	56.092	Papio_anubis
ENSMMOG00000005203	tnrc6c1	100	56.645	ENSPKIG00000005428	tnrc6c1	100	57.506	Paramormyrops_kingsleyae
ENSMMOG00000005203	tnrc6c1	97	52.174	ENSPSIG00000018069	TNRC6C	84	55.916	Pelodiscus_sinensis
ENSMMOG00000005203	tnrc6c1	92	69.593	ENSPMGG00000022911	tnrc6c1	97	79.424	Periophthalmus_magnuspinnatus
ENSMMOG00000005203	tnrc6c1	100	50.225	ENSPEMG00000009785	Tnrc6c	78	52.118	Peromyscus_maniculatus_bairdii
ENSMMOG00000005203	tnrc6c1	52	40.289	ENSPCIG00000017421	-	62	44.953	Phascolarctos_cinereus
ENSMMOG00000005203	tnrc6c1	100	79.494	ENSPFOG00000012560	tnrc6c1	99	73.854	Poecilia_formosa
ENSMMOG00000005203	tnrc6c1	100	79.432	ENSPLAG00000021055	tnrc6c1	100	79.679	Poecilia_latipinna
ENSMMOG00000005203	tnrc6c1	100	49.667	ENSPPYG00000008679	TNRC6C	82	54.533	Pongo_abelii
ENSMMOG00000005203	tnrc6c1	85	66.892	ENSPCAG00000012510	TNRC6C	70	66.892	Procavia_capensis
ENSMMOG00000005203	tnrc6c1	100	50.169	ENSPCOG00000021451	TNRC6C	79	55.940	Propithecus_coquereli
ENSMMOG00000005203	tnrc6c1	73	59.375	ENSPVAG00000002008	TNRC6C	72	60.000	Pteropus_vampyrus
ENSMMOG00000005203	tnrc6c1	100	80.506	ENSPNYG00000014477	tnrc6c1	100	80.444	Pundamilia_nyererei
ENSMMOG00000005203	tnrc6c1	97	50.466	ENSRNOG00000022395	Tnrc6c	78	55.090	Rattus_norvegicus
ENSMMOG00000005203	tnrc6c1	100	50.536	ENSRBIG00000027777	TNRC6C	79	55.971	Rhinopithecus_bieti
ENSMMOG00000005203	tnrc6c1	100	50.536	ENSRROG00000042912	TNRC6C	79	55.971	Rhinopithecus_roxellana
ENSMMOG00000005203	tnrc6c1	100	49.611	ENSSBOG00000023981	TNRC6C	93	54.187	Saimiri_boliviensis_boliviensis
ENSMMOG00000005203	tnrc6c1	55	62.395	ENSSHAG00000018330	-	100	62.080	Sarcophilus_harrisii
ENSMMOG00000005203	tnrc6c1	90	63.029	ENSSFOG00015004735	-	99	65.561	Scleropages_formosus
ENSMMOG00000005203	tnrc6c1	100	60.708	ENSSFOG00015006475	tnrc6c1	92	60.592	Scleropages_formosus
ENSMMOG00000005203	tnrc6c1	100	82.611	ENSSMAG00000012761	tnrc6c1	99	84.112	Scophthalmus_maximus
ENSMMOG00000005203	tnrc6c1	100	86.423	ENSSDUG00000002366	tnrc6c1	93	86.299	Seriola_dumerili
ENSMMOG00000005203	tnrc6c1	100	86.299	ENSSLDG00000025613	tnrc6c1	100	86.175	Seriola_lalandi_dorsalis
ENSMMOG00000005203	tnrc6c1	69	63.525	ENSSARG00000006816	TNRC6C	67	63.525	Sorex_araneus
ENSMMOG00000005203	tnrc6c1	84	53.826	ENSSPUG00000007341	TNRC6C	87	54.412	Sphenodon_punctatus
ENSMMOG00000005203	tnrc6c1	98	85.167	ENSSPAG00000014977	tnrc6c1	92	85.786	Stegastes_partitus
ENSMMOG00000005203	tnrc6c1	98	50.373	ENSSSCG00000034373	TNRC6C	79	55.876	Sus_scrofa
ENSMMOG00000005203	tnrc6c1	97	51.361	ENSTGUG00000007733	TNRC6C	75	56.414	Taeniopygia_guttata
ENSMMOG00000005203	tnrc6c1	100	80.621	ENSTRUG00000011685	tnrc6c1	100	80.482	Takifugu_rubripes
ENSMMOG00000005203	tnrc6c1	100	78.567	ENSTNIG00000005273	tnrc6c1	100	78.649	Tetraodon_nigroviridis
ENSMMOG00000005203	tnrc6c1	68	50.348	ENSTBEG00000005046	TNRC6C	100	50.549	Tupaia_belangeri
ENSMMOG00000005203	tnrc6c1	97	51.195	ENSTTRG00000010828	TNRC6C	76	56.142	Tursiops_truncatus
ENSMMOG00000005203	tnrc6c1	97	48.916	ENSUMAG00000013614	TNRC6C	70	53.512	Ursus_maritimus
ENSMMOG00000005203	tnrc6c1	54	51.881	ENSVPAG00000006765	-	99	52.649	Vicugna_pacos
ENSMMOG00000005203	tnrc6c1	97	50.668	ENSVVUG00000015268	TNRC6C	79	55.220	Vulpes_vulpes
ENSMMOG00000005203	tnrc6c1	97	50.264	ENSXETG00000019470	tnrc6c	76	55.395	Xenopus_tropicalis
ENSMMOG00000005203	tnrc6c1	100	79.406	ENSXMAG00000025971	tnrc6c1	100	79.654	Xiphophorus_maculatus