EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000005309 (Gene tree)
Gene ID: -
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA-binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 16127 bases
Position: chrKV751334.1:4878552-4894678
Accession: ZDB-GENE-060312-35
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000006812	RRM_1	PF00076.22	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000006937	-	1404	-	ENSMMOP00000006812	467 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000005309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000005309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000005309	rnpc3	97	51.807	ENSG00000185946	RNPC3	96	54.135	Homo_sapiens
ENSMMOG00000005309	rnpc3	100	76.984	ENSAPOG00000017371	rnpc3	100	75.794	Acanthochromis_polyacanthus
ENSMMOG00000005309	rnpc3	97	51.400	ENSAMEG00000001694	RNPC3	95	51.417	Ailuropoda_melanoleuca
ENSMMOG00000005309	rnpc3	99	73.800	ENSACIG00000021043	rnpc3	99	72.455	Amphilophus_citrinellus
ENSMMOG00000005309	rnpc3	100	76.712	ENSAOCG00000014052	rnpc3	98	75.538	Amphiprion_ocellaris
ENSMMOG00000005309	rnpc3	100	76.517	ENSAPEG00000008739	rnpc3	98	75.342	Amphiprion_percula
ENSMMOG00000005309	rnpc3	100	74.662	ENSATEG00000021263	rnpc3	100	73.114	Anabas_testudineus
ENSMMOG00000005309	rnpc3	88	50.557	ENSAPLG00000015605	RNPC3	99	52.561	Anas_platyrhynchos
ENSMMOG00000005309	rnpc3	95	53.571	ENSACAG00000002029	RNPC3	96	52.263	Anolis_carolinensis
ENSMMOG00000005309	rnpc3	97	51.503	ENSANAG00000019950	RNPC3	95	51.521	Aotus_nancymaae
ENSMMOG00000005309	rnpc3	99	78.182	ENSACLG00000014702	rnpc3	99	76.364	Astatotilapia_calliptera
ENSMMOG00000005309	rnpc3	99	62.205	ENSAMXG00000033372	rnpc3	99	61.811	Astyanax_mexicanus
ENSMMOG00000005309	rnpc3	97	52.008	ENSBTAG00000019091	RNPC3	95	52.333	Bos_taurus
ENSMMOG00000005309	rnpc3	97	53.002	ENSCJAG00000035686	RNPC3	95	52.588	Callithrix_jacchus
ENSMMOG00000005309	rnpc3	97	51.503	ENSCAFG00000019972	RNPC3	95	51.521	Canis_familiaris
ENSMMOG00000005309	rnpc3	97	51.503	ENSCAFG00020011300	RNPC3	95	51.521	Canis_lupus_dingo
ENSMMOG00000005309	rnpc3	97	52.535	ENSCHIG00000020361	RNPC3	95	52.024	Capra_hircus
ENSMMOG00000005309	rnpc3	97	51.205	ENSTSYG00000030256	RNPC3	95	51.724	Carlito_syrichta
ENSMMOG00000005309	rnpc3	85	44.921	ENSCAPG00000013600	RNPC3	99	45.161	Cavia_aperea
ENSMMOG00000005309	rnpc3	97	50.296	ENSCPOG00000031638	RNPC3	95	50.898	Cavia_porcellus
ENSMMOG00000005309	rnpc3	97	51.303	ENSCCAG00000024301	RNPC3	95	51.318	Cebus_capucinus
ENSMMOG00000005309	rnpc3	97	51.703	ENSCATG00000002086	RNPC3	95	51.724	Cercocebus_atys
ENSMMOG00000005309	rnpc3	97	40.795	ENSCATG00000035930	-	95	40.605	Cercocebus_atys
ENSMMOG00000005309	rnpc3	97	49.703	ENSCLAG00000005169	RNPC3	95	50.100	Chinchilla_lanigera
ENSMMOG00000005309	rnpc3	97	51.503	ENSCSAG00000001519	RNPC3	95	51.521	Chlorocebus_sabaeus
ENSMMOG00000005309	rnpc3	96	53.783	ENSCPBG00000028311	RNPC3	95	53.455	Chrysemys_picta_bellii
ENSMMOG00000005309	rnpc3	94	36.245	ENSCSAVG00000002800	-	100	35.153	Ciona_savignyi
ENSMMOG00000005309	rnpc3	97	51.703	ENSCANG00000031444	RNPC3	95	51.724	Colobus_angolensis_palliatus
ENSMMOG00000005309	rnpc3	96	50.403	ENSCGRG00001019276	Rnpc3	95	51.731	Cricetulus_griseus_chok1gshd
ENSMMOG00000005309	rnpc3	88	49.345	ENSCGRG00000000053	Rnpc3	99	50.773	Cricetulus_griseus_crigri
ENSMMOG00000005309	rnpc3	99	66.397	ENSCSEG00000013475	rnpc3	99	69.838	Cynoglossus_semilaevis
ENSMMOG00000005309	rnpc3	100	70.175	ENSCVAG00000002645	rnpc3	100	70.760	Cyprinodon_variegatus
ENSMMOG00000005309	rnpc3	99	63.546	ENSDARG00000011247	rnpc3	99	63.745	Danio_rerio
ENSMMOG00000005309	rnpc3	97	51.004	ENSDNOG00000047498	-	95	51.220	Dasypus_novemcinctus
ENSMMOG00000005309	rnpc3	97	50.602	ENSDNOG00000044555	-	95	50.813	Dasypus_novemcinctus
ENSMMOG00000005309	rnpc3	97	50.905	ENSDORG00000027343	Rnpc3	95	51.120	Dipodomys_ordii
ENSMMOG00000005309	rnpc3	97	46.863	ENSEBUG00000002068	rnpc3	96	46.733	Eptatretus_burgeri
ENSMMOG00000005309	rnpc3	97	52.410	ENSEASG00005015957	RNPC3	95	52.439	Equus_asinus_asinus
ENSMMOG00000005309	rnpc3	97	52.410	ENSECAG00000021148	RNPC3	95	52.439	Equus_caballus
ENSMMOG00000005309	rnpc3	99	64.751	ENSELUG00000002264	rnpc3	99	63.340	Esox_lucius
ENSMMOG00000005309	rnpc3	97	51.098	ENSFCAG00000024312	RNPC3	95	51.111	Felis_catus
ENSMMOG00000005309	rnpc3	88	53.880	ENSFALG00000002580	RNPC3	99	53.555	Ficedula_albicollis
ENSMMOG00000005309	rnpc3	97	50.098	ENSFDAG00000019948	RNPC3	95	50.898	Fukomys_damarensis
ENSMMOG00000005309	rnpc3	100	65.795	ENSFHEG00000020647	rnpc3	100	69.231	Fundulus_heteroclitus
ENSMMOG00000005309	rnpc3	100	68.257	ENSGMOG00000019213	rnpc3	99	66.805	Gadus_morhua
ENSMMOG00000005309	rnpc3	96	53.279	ENSGALG00000005162	RNPC3	88	51.230	Gallus_gallus
ENSMMOG00000005309	rnpc3	100	71.120	ENSGAFG00000017236	rnpc3	100	70.138	Gambusia_affinis
ENSMMOG00000005309	rnpc3	100	74.308	ENSGACG00000002048	rnpc3	98	73.913	Gasterosteus_aculeatus
ENSMMOG00000005309	rnpc3	96	53.878	ENSGAGG00000008438	RNPC3	94	53.659	Gopherus_agassizii
ENSMMOG00000005309	rnpc3	96	48.283	ENSGGOG00000026201	-	94	47.639	Gorilla_gorilla
ENSMMOG00000005309	rnpc3	83	84.593	ENSHBUG00000015966	rnpc3	85	84.593	Haplochromis_burtoni
ENSMMOG00000005309	rnpc3	97	49.507	ENSHGLG00000001708	RNPC3	95	50.299	Heterocephalus_glaber_female
ENSMMOG00000005309	rnpc3	97	49.507	ENSHGLG00100003005	RNPC3	95	50.299	Heterocephalus_glaber_male
ENSMMOG00000005309	rnpc3	99	71.287	ENSHCOG00000017135	rnpc3	100	69.901	Hippocampus_comes
ENSMMOG00000005309	rnpc3	99	60.835	ENSIPUG00000002916	rnpc3	99	61.355	Ictalurus_punctatus
ENSMMOG00000005309	rnpc3	97	50.898	ENSSTOG00000025020	RNPC3	95	50.913	Ictidomys_tridecemlineatus
ENSMMOG00000005309	rnpc3	96	50.505	ENSJJAG00000010203	Rnpc3	96	50.509	Jaculus_jaculus
ENSMMOG00000005309	rnpc3	99	75.203	ENSKMAG00000017358	rnpc3	99	74.390	Kryptolebias_marmoratus
ENSMMOG00000005309	rnpc3	100	70.866	ENSLBEG00000024901	rnpc3	98	74.213	Labrus_bergylta
ENSMMOG00000005309	rnpc3	99	51.896	ENSLACG00000005720	RNPC3	92	54.291	Latimeria_chalumnae
ENSMMOG00000005309	rnpc3	99	55.159	ENSLOCG00000007986	rnpc3	99	57.937	Lepisosteus_oculatus
ENSMMOG00000005309	rnpc3	97	51.594	ENSLAFG00000032342	RNPC3	95	51.619	Loxodonta_africana
ENSMMOG00000005309	rnpc3	97	51.703	ENSMFAG00000002004	RNPC3	95	51.724	Macaca_fascicularis
ENSMMOG00000005309	rnpc3	97	42.174	ENSMFAG00000002917	-	95	41.394	Macaca_fascicularis
ENSMMOG00000005309	rnpc3	97	51.503	ENSMMUG00000018039	RNPC3	95	51.521	Macaca_mulatta
ENSMMOG00000005309	rnpc3	80	51.724	ENSMMUG00000002098	-	84	51.724	Macaca_mulatta
ENSMMOG00000005309	rnpc3	97	48.996	ENSMNEG00000033950	RNPC3	95	48.984	Macaca_nemestrina
ENSMMOG00000005309	rnpc3	78	46.092	ENSMNEG00000029209	-	95	40.132	Macaca_nemestrina
ENSMMOG00000005309	rnpc3	97	51.703	ENSMLEG00000033628	RNPC3	95	51.724	Mandrillus_leucophaeus
ENSMMOG00000005309	rnpc3	97	41.978	ENSMLEG00000034644	-	95	41.538	Mandrillus_leucophaeus
ENSMMOG00000005309	rnpc3	100	69.352	ENSMAMG00000007496	rnpc3	100	68.173	Mastacembelus_armatus
ENSMMOG00000005309	rnpc3	99	75.292	ENSMZEG00005020233	rnpc3	99	73.541	Maylandia_zebra
ENSMMOG00000005309	rnpc3	88	51.974	ENSMGAG00000006381	RNPC3	99	52.193	Meleagris_gallopavo
ENSMMOG00000005309	rnpc3	97	50.704	ENSMAUG00000001358	Rnpc3	95	52.429	Mesocricetus_auratus
ENSMMOG00000005309	rnpc3	97	50.902	ENSMICG00000029591	RNPC3	95	51.116	Microcebus_murinus
ENSMMOG00000005309	rnpc3	97	50.602	ENSMOCG00000013423	Rnpc3	95	51.829	Microtus_ochrogaster
ENSMMOG00000005309	rnpc3	96	52.156	ENSMODG00000002946	RNPC3	95	51.540	Monodelphis_domestica
ENSMMOG00000005309	rnpc3	99	70.530	ENSMALG00000015471	rnpc3	100	69.155	Monopterus_albus
ENSMMOG00000005309	rnpc3	97	51.000	MGP_CAROLIEiJ_G0025555	Rnpc3	96	52.245	Mus_caroli
ENSMMOG00000005309	rnpc3	97	50.797	ENSMUSG00000027981	Rnpc3	99	51.078	Mus_musculus
ENSMMOG00000005309	rnpc3	97	50.398	MGP_PahariEiJ_G0027001	Rnpc3	96	51.829	Mus_pahari
ENSMMOG00000005309	rnpc3	97	50.598	MGP_SPRETEiJ_G0026505	Rnpc3	96	52.033	Mus_spretus
ENSMMOG00000005309	rnpc3	97	52.410	ENSMPUG00000007349	RNPC3	95	51.521	Mustela_putorius_furo
ENSMMOG00000005309	rnpc3	96	51.004	ENSMLUG00000028743	RNPC3	95	52.033	Myotis_lucifugus
ENSMMOG00000005309	rnpc3	97	50.501	ENSNGAG00000010939	Rnpc3	95	51.318	Nannospalax_galili
ENSMMOG00000005309	rnpc3	99	78.384	ENSNBRG00000012196	rnpc3	96	76.566	Neolamprologus_brichardi
ENSMMOG00000005309	rnpc3	97	51.807	ENSNLEG00000012013	RNPC3	95	51.829	Nomascus_leucogenys
ENSMMOG00000005309	rnpc3	97	51.085	ENSODEG00000007612	RNPC3	95	50.400	Octodon_degus
ENSMMOG00000005309	rnpc3	99	76.575	ENSONIG00000004770	rnpc3	100	75.051	Oreochromis_niloticus
ENSMMOG00000005309	rnpc3	91	51.055	ENSOANG00000008220	RNPC3	99	51.496	Ornithorhynchus_anatinus
ENSMMOG00000005309	rnpc3	97	52.419	ENSOCUG00000004016	RNPC3	95	51.613	Oryctolagus_cuniculus
ENSMMOG00000005309	rnpc3	100	71.058	ENSORLG00000005694	rnpc3	100	69.461	Oryzias_latipes
ENSMMOG00000005309	rnpc3	100	71.856	ENSORLG00020005513	rnpc3	100	70.259	Oryzias_latipes_hni
ENSMMOG00000005309	rnpc3	100	71.457	ENSORLG00015002179	rnpc3	100	69.860	Oryzias_latipes_hsok
ENSMMOG00000005309	rnpc3	97	51.896	ENSOGAG00000026182	RNPC3	95	52.121	Otolemur_garnettii
ENSMMOG00000005309	rnpc3	97	52.535	ENSOARG00000018719	RNPC3	95	52.024	Ovis_aries
ENSMMOG00000005309	rnpc3	97	51.600	ENSPPAG00000037459	RNPC3	95	51.619	Pan_paniscus
ENSMMOG00000005309	rnpc3	96	47.458	ENSPPAG00000030278	-	97	46.960	Pan_paniscus
ENSMMOG00000005309	rnpc3	97	51.400	ENSPPRG00000020246	RNPC3	95	51.417	Panthera_pardus
ENSMMOG00000005309	rnpc3	97	51.400	ENSPTIG00000009887	RNPC3	97	51.417	Panthera_tigris_altaica
ENSMMOG00000005309	rnpc3	96	47.300	ENSPTRG00000044227	-	97	46.398	Pan_troglodytes
ENSMMOG00000005309	rnpc3	97	51.503	ENSPTRG00000033902	RNPC3	95	51.521	Pan_troglodytes
ENSMMOG00000005309	rnpc3	97	51.807	ENSPANG00000012137	RNPC3	95	51.829	Papio_anubis
ENSMMOG00000005309	rnpc3	97	43.305	ENSPANG00000029957	-	96	42.184	Papio_anubis
ENSMMOG00000005309	rnpc3	99	57.957	ENSPKIG00000008828	rnpc3	99	62.231	Paramormyrops_kingsleyae
ENSMMOG00000005309	rnpc3	64	50.610	ENSPSIG00000007396	RNPC3	99	50.000	Pelodiscus_sinensis
ENSMMOG00000005309	rnpc3	99	60.878	ENSPMGG00000011742	rnpc3	100	61.078	Periophthalmus_magnuspinnatus
ENSMMOG00000005309	rnpc3	88	49.892	ENSPEMG00000020112	Rnpc3	99	51.316	Peromyscus_maniculatus_bairdii
ENSMMOG00000005309	rnpc3	96	51.724	ENSPCIG00000004415	-	95	52.156	Phascolarctos_cinereus
ENSMMOG00000005309	rnpc3	99	72.619	ENSPFOG00000009895	rnpc3	99	71.627	Poecilia_formosa
ENSMMOG00000005309	rnpc3	99	72.817	ENSPLAG00000012023	rnpc3	99	71.825	Poecilia_latipinna
ENSMMOG00000005309	rnpc3	99	72.817	ENSPMEG00000003663	rnpc3	99	71.825	Poecilia_mexicana
ENSMMOG00000005309	rnpc3	100	72.189	ENSPREG00000010206	rnpc3	100	71.203	Poecilia_reticulata
ENSMMOG00000005309	rnpc3	79	47.242	ENSPPYG00000001102	RNPC3	94	47.202	Pongo_abelii
ENSMMOG00000005309	rnpc3	99	78.182	ENSPNYG00000020603	rnpc3	99	76.364	Pundamilia_nyererei
ENSMMOG00000005309	rnpc3	99	57.258	ENSPNAG00000000524	rnpc3	92	56.855	Pygocentrus_nattereri
ENSMMOG00000005309	rnpc3	97	50.898	ENSRNOG00000017310	Rnpc3	95	52.121	Rattus_norvegicus
ENSMMOG00000005309	rnpc3	97	48.297	ENSRBIG00000043897	RNPC3	95	48.276	Rhinopithecus_bieti
ENSMMOG00000005309	rnpc3	97	51.703	ENSRROG00000032334	RNPC3	95	51.724	Rhinopithecus_roxellana
ENSMMOG00000005309	rnpc3	97	51.205	ENSSBOG00000024473	RNPC3	95	51.220	Saimiri_boliviensis_boliviensis
ENSMMOG00000005309	rnpc3	96	51.423	ENSSHAG00000011859	RNPC3	95	50.813	Sarcophilus_harrisii
ENSMMOG00000005309	rnpc3	97	66.255	ENSSFOG00015013055	rnpc3	99	65.844	Scleropages_formosus
ENSMMOG00000005309	rnpc3	100	69.961	ENSSMAG00000020346	rnpc3	100	69.767	Scophthalmus_maximus
ENSMMOG00000005309	rnpc3	100	77.043	ENSSDUG00000006600	rnpc3	100	75.292	Seriola_dumerili
ENSMMOG00000005309	rnpc3	100	77.043	ENSSLDG00000007979	rnpc3	100	75.486	Seriola_lalandi_dorsalis
ENSMMOG00000005309	rnpc3	96	48.842	ENSSPUG00000003872	-	91	50.526	Sphenodon_punctatus
ENSMMOG00000005309	rnpc3	100	79.022	ENSSPAG00000005633	rnpc3	100	78.819	Stegastes_partitus
ENSMMOG00000005309	rnpc3	97	52.104	ENSSSCG00000037254	RNPC3	95	51.927	Sus_scrofa
ENSMMOG00000005309	rnpc3	88	55.134	ENSTGUG00000004795	-	99	51.339	Taeniopygia_guttata
ENSMMOG00000005309	rnpc3	99	74.851	ENSTNIG00000018963	rnpc3	100	72.871	Tetraodon_nigroviridis
ENSMMOG00000005309	rnpc3	97	51.503	ENSUMAG00000007775	RNPC3	97	51.521	Ursus_maritimus
ENSMMOG00000005309	rnpc3	97	51.503	ENSVVUG00000000331	RNPC3	95	51.521	Vulpes_vulpes
ENSMMOG00000005309	rnpc3	99	41.715	ENSXETG00000025027	rnpc3	96	40.600	Xenopus_tropicalis
ENSMMOG00000005309	rnpc3	100	71.961	ENSXCOG00000005013	rnpc3	100	71.569	Xiphophorus_couchianus
ENSMMOG00000005309	rnpc3	100	68.173	ENSXMAG00000006495	rnpc3	100	71.513	Xiphophorus_maculatus