EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMMOG00000005405 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Plus strand
Length
10726 bases
Position
chrKV751334.1:5867910-5878635
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000006970RRM_1PF00076.222e-1711
ENSMMOP00000006966RRM_1PF00076.223.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000007101-699-ENSMMOP00000006970232 (aa)--
ENSMMOT00000007097-855-ENSMMOP00000006966284 (aa)--
Gene Model
Click here to download ENSMMOG00000005405's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000005405's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000005405pabpn19972.961ENSG00000258643BCL2L2-PABPN17072.961Homo_sapiens
ENSMMOG00000005405pabpn18683.010ENSG00000100836PABPN19482.738Homo_sapiens
ENSMMOG00000005405pabpn110099.138ENSAPOG00000016425pabpn110099.138Acanthochromis_polyacanthus
ENSMMOG00000005405pabpn18184.737ENSAMEG00000007048BCL2L2-PABPN110084.737Ailuropoda_melanoleuca
ENSMMOG00000005405pabpn110097.552ENSACIG00000021744pabpn110099.432Amphilophus_citrinellus
ENSMMOG00000005405pabpn110099.138ENSAOCG00000015805pabpn110099.138Amphiprion_ocellaris
ENSMMOG00000005405pabpn110099.138ENSAPEG00000009623pabpn110099.138Amphiprion_percula
ENSMMOG00000005405pabpn110099.569ENSATEG00000020531pabpn110099.569Anabas_testudineus
ENSMMOG00000005405pabpn18185.789ENSACAG00000006185-8172.917Anolis_carolinensis
ENSMMOG00000005405pabpn18484.343ENSANAG00000024513-8476.446Aotus_nancymaae
ENSMMOG00000005405pabpn110097.213ENSACLG00000016374pabpn110097.213Astatotilapia_calliptera
ENSMMOG00000005405pabpn110097.854ENSAMXG00000000452pabpn110097.854Astyanax_mexicanus
ENSMMOG00000005405pabpn18183.333ENSBTAG00000053753-7183.333Bos_taurus
ENSMMOG00000005405pabpn18477.041ENSBTAG00000050594-7680.303Bos_taurus
ENSMMOG00000005405pabpn18484.343ENSBTAG00000006884PABPN18670.076Bos_taurus
ENSMMOG00000005405pabpn16258.904WBGene00003904pabp-28654.696Caenorhabditis_elegans
ENSMMOG00000005405pabpn19976.395ENSCJAG00000007960-8476.824Callithrix_jacchus
ENSMMOG00000005405pabpn17180.952ENSCJAG00000004407-8480.952Callithrix_jacchus
ENSMMOG00000005405pabpn18683.010ENSCAFG00000011482PABPN18671.591Canis_familiaris
ENSMMOG00000005405pabpn18683.010ENSCAFG00020007298-8671.212Canis_lupus_dingo
ENSMMOG00000005405pabpn18683.010ENSCAFG00020006651-8671.212Canis_lupus_dingo
ENSMMOG00000005405pabpn18683.010ENSCHIG00000012184PABPN18671.212Capra_hircus
ENSMMOG00000005405pabpn19972.961ENSTSYG00000033996BCL2L2-PABPN19482.738Carlito_syrichta
ENSMMOG00000005405pabpn15982.734ENSCAPG00000009461-9982.734Cavia_aperea
ENSMMOG00000005405pabpn18682.524ENSCPOG00000025574PABPN16882.297Cavia_porcellus
ENSMMOG00000005405pabpn19976.395ENSCCAG00000033954BCL2L2-PABPN18476.824Cebus_capucinus
ENSMMOG00000005405pabpn19976.395ENSCATG00000038536BCL2L2-PABPN18476.824Cercocebus_atys
ENSMMOG00000005405pabpn16582.781ENSCLAG00000012423PABPN15682.781Chinchilla_lanigera
ENSMMOG00000005405pabpn18681.553ENSCSAG00000016036PABPN18670.076Chlorocebus_sabaeus
ENSMMOG00000005405pabpn18973.333ENSCHOG00000004798BCL2L2-PABPN19271.364Choloepus_hoffmanni
ENSMMOG00000005405pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSMMOG00000005405pabpn19064.929ENSCING00000012468-8961.611Ciona_intestinalis
ENSMMOG00000005405pabpn17666.854ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSMMOG00000005405pabpn18571.717ENSCANG00000030980-8764.706Colobus_angolensis_palliatus
ENSMMOG00000005405pabpn19972.961ENSCANG00000009750BCL2L2-PABPN19482.738Colobus_angolensis_palliatus
ENSMMOG00000005405pabpn18682.524ENSCGRG00001019696Pabpn19482.143Cricetulus_griseus_chok1gshd
ENSMMOG00000005405pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSMMOG00000005405pabpn110097.845ENSCSEG00000008774pabpn110097.845Cynoglossus_semilaevis
ENSMMOG00000005405pabpn110093.590ENSCVAG00000003152pabpn110094.872Cyprinodon_variegatus
ENSMMOG00000005405pabpn110097.845ENSDARG00000045373pabpn110097.845Danio_rerio
ENSMMOG00000005405pabpn18153.476ENSDARG00000087996pabpn1l8754.335Danio_rerio
ENSMMOG00000005405pabpn18683.010ENSDNOG00000023682PABPN18671.212Dasypus_novemcinctus
ENSMMOG00000005405pabpn18682.039ENSDORG00000028966-8670.076Dipodomys_ordii
ENSMMOG00000005405pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSMMOG00000005405pabpn110057.983FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSMMOG00000005405pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSMMOG00000005405pabpn18683.010ENSEASG00005011716PABPN18671.212Equus_asinus_asinus
ENSMMOG00000005405pabpn18582.353ENSECAG00000011652PABPN18570.751Equus_caballus
ENSMMOG00000005405pabpn18680.583ENSEEUG00000012973-6978.818Erinaceus_europaeus
ENSMMOG00000005405pabpn110095.359ENSELUG00000022654pabpn110095.359Esox_lucius
ENSMMOG00000005405pabpn18683.010ENSFCAG00000031922PABPN18671.212Felis_catus
ENSMMOG00000005405pabpn17182.738ENSFDAG00000018381BCL2L2-PABPN19482.738Fukomys_damarensis
ENSMMOG00000005405pabpn110096.121ENSFHEG00000007215pabpn110096.121Fundulus_heteroclitus
ENSMMOG00000005405pabpn110092.982ENSGMOG00000003922pabpn110095.439Gadus_morhua
ENSMMOG00000005405pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSMMOG00000005405pabpn110098.291ENSGAFG00000017099pabpn110098.291Gambusia_affinis
ENSMMOG00000005405pabpn110097.535ENSGACG00000002167pabpn110097.535Gasterosteus_aculeatus
ENSMMOG00000005405pabpn19976.395ENSGGOG00000022683-8476.824Gorilla_gorilla
ENSMMOG00000005405pabpn19466.667ENSGGOG00000025919-9869.799Gorilla_gorilla
ENSMMOG00000005405pabpn18970.192ENSGGOG00000039675-9166.250Gorilla_gorilla
ENSMMOG00000005405pabpn110099.569ENSHBUG00000019523pabpn110099.569Haplochromis_burtoni
ENSMMOG00000005405pabpn18770.048ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSMMOG00000005405pabpn17163.473ENSHGLG00000009842-9363.473Heterocephalus_glaber_female
ENSMMOG00000005405pabpn18682.524ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSMMOG00000005405pabpn18770.048ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSMMOG00000005405pabpn19471.946ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSMMOG00000005405pabpn17170.060ENSHGLG00100018935-9473.256Heterocephalus_glaber_male
ENSMMOG00000005405pabpn110098.276ENSHCOG00000004655pabpn110098.276Hippocampus_comes
ENSMMOG00000005405pabpn110089.655ENSIPUG00000000180-9989.655Ictalurus_punctatus
ENSMMOG00000005405pabpn110097.414ENSIPUG00000008085PABPN110097.414Ictalurus_punctatus
ENSMMOG00000005405pabpn17182.738ENSSTOG00000029847BCL2L2-PABPN19482.738Ictidomys_tridecemlineatus
ENSMMOG00000005405pabpn17182.738ENSJJAG00000023507Gm205219482.738Jaculus_jaculus
ENSMMOG00000005405pabpn110097.895ENSKMAG00000018748pabpn110097.895Kryptolebias_marmoratus
ENSMMOG00000005405pabpn110099.569ENSLBEG00000027266pabpn110099.569Labrus_bergylta
ENSMMOG00000005405pabpn17588.202ENSLACG00000000646pabpn18584.536Latimeria_chalumnae
ENSMMOG00000005405pabpn110092.281ENSLOCG00000000796pabpn110092.632Lepisosteus_oculatus
ENSMMOG00000005405pabpn19066.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSMMOG00000005405pabpn16583.444ENSLAFG00000031227-9983.444Loxodonta_africana
ENSMMOG00000005405pabpn16175.352ENSMFAG00000031355-9975.352Macaca_fascicularis
ENSMMOG00000005405pabpn19972.961ENSMFAG00000032183BCL2L2-PABPN19482.738Macaca_fascicularis
ENSMMOG00000005405pabpn19972.961ENSMMUG00000014747BCL2L2-PABPN110082.993Macaca_mulatta
ENSMMOG00000005405pabpn18668.780ENSMMUG00000048382-8959.259Macaca_mulatta
ENSMMOG00000005405pabpn19976.395ENSMNEG00000045065BCL2L2-PABPN18476.824Macaca_nemestrina
ENSMMOG00000005405pabpn17969.519ENSMNEG00000035750-9975.352Macaca_nemestrina
ENSMMOG00000005405pabpn17267.066ENSMLEG00000034623-9973.239Mandrillus_leucophaeus
ENSMMOG00000005405pabpn19972.961ENSMLEG00000043862BCL2L2-PABPN19482.738Mandrillus_leucophaeus
ENSMMOG00000005405pabpn110098.239ENSMAMG00000007979pabpn110098.239Mastacembelus_armatus
ENSMMOG00000005405pabpn110099.648ENSMZEG00005011904pabpn110099.648Maylandia_zebra
ENSMMOG00000005405pabpn19972.961ENSMAUG00000007383Gm205218370.400Mesocricetus_auratus
ENSMMOG00000005405pabpn19976.824ENSMICG00000010002BCL2L2-PABPN18477.542Microcebus_murinus
ENSMMOG00000005405pabpn19972.532ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSMMOG00000005405pabpn18579.703ENSMODG00000004535-8270.238Monodelphis_domestica
ENSMMOG00000005405pabpn110098.592ENSMALG00000019612pabpn110098.592Monopterus_albus
ENSMMOG00000005405pabpn19972.103MGP_CAROLIEiJ_G0019276Gm205217072.103Mus_caroli
ENSMMOG00000005405pabpn18681.553MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSMMOG00000005405pabpn18682.039ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSMMOG00000005405pabpn19972.532ENSMUSG00000092232Gm205217072.532Mus_musculus
ENSMMOG00000005405pabpn19972.532MGP_PahariEiJ_G0030294Gm205217072.532Mus_pahari
ENSMMOG00000005405pabpn18682.039MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSMMOG00000005405pabpn19972.532MGP_SPRETEiJ_G0020165Gm205217072.532Mus_spretus
ENSMMOG00000005405pabpn18682.039MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSMMOG00000005405pabpn16682.692ENSMPUG00000006775-9282.692Mustela_putorius_furo
ENSMMOG00000005405pabpn18481.818ENSMLUG00000028677-8573.729Myotis_lucifugus
ENSMMOG00000005405pabpn18183.684ENSMLUG00000003800-10083.684Myotis_lucifugus
ENSMMOG00000005405pabpn18880.000ENSMLUG00000012452-8271.429Myotis_lucifugus
ENSMMOG00000005405pabpn19973.391ENSNGAG00000019529Gm205217073.391Nannospalax_galili
ENSMMOG00000005405pabpn110099.296ENSNBRG00000023955pabpn110099.432Neolamprologus_brichardi
ENSMMOG00000005405pabpn16460.811ENSNLEG00000035292-9960.811Nomascus_leucogenys
ENSMMOG00000005405pabpn18669.268ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSMMOG00000005405pabpn19972.961ENSNLEG00000015007-7482.775Nomascus_leucogenys
ENSMMOG00000005405pabpn19972.532ENSODEG00000002083BCL2L2-PABPN16882.297Octodon_degus
ENSMMOG00000005405pabpn17673.184ENSODEG00000011555-8972.024Octodon_degus
ENSMMOG00000005405pabpn18674.384ENSODEG00000003739-8863.035Octodon_degus
ENSMMOG00000005405pabpn110099.296ENSONIG00000008112pabpn110099.296Oreochromis_niloticus
ENSMMOG00000005405pabpn16385.034ENSOANG00000009218-10085.034Ornithorhynchus_anatinus
ENSMMOG00000005405pabpn18682.524ENSOCUG00000016174PABPN19570.992Oryctolagus_cuniculus
ENSMMOG00000005405pabpn110098.239ENSORLG00000027900pabpn110098.239Oryzias_latipes
ENSMMOG00000005405pabpn19998.690ENSORLG00020004681pabpn110095.548Oryzias_latipes_hni
ENSMMOG00000005405pabpn110099.138ENSORLG00015000018pabpn110099.138Oryzias_latipes_hsok
ENSMMOG00000005405pabpn110098.239ENSOMEG00000016618pabpn110098.239Oryzias_melastigma
ENSMMOG00000005405pabpn18683.010ENSOGAG00000008710PABPN18671.212Otolemur_garnettii
ENSMMOG00000005405pabpn19972.961ENSOARG00000019336BCL2L2-PABPN16472.961Ovis_aries
ENSMMOG00000005405pabpn19972.961ENSPPAG00000028984BCL2L2-PABPN19282.692Pan_paniscus
ENSMMOG00000005405pabpn17168.072ENSPPAG00000039421-9368.072Pan_paniscus
ENSMMOG00000005405pabpn18683.010ENSPPRG00000010567PABPN18671.212Panthera_pardus
ENSMMOG00000005405pabpn17182.738ENSPTIG00000001063BCL2L2-PABPN19482.738Panthera_tigris_altaica
ENSMMOG00000005405pabpn110063.675ENSPTRG00000047273-9361.111Pan_troglodytes
ENSMMOG00000005405pabpn19976.395ENSPTRG00000006167BCL2L28476.824Pan_troglodytes
ENSMMOG00000005405pabpn18470.202ENSPANG00000023326-9976.056Papio_anubis
ENSMMOG00000005405pabpn19976.395ENSPANG00000021100BCL2L2-PABPN18476.824Papio_anubis
ENSMMOG00000005405pabpn17169.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSMMOG00000005405pabpn110092.275ENSPKIG00000018052pabpn110095.279Paramormyrops_kingsleyae
ENSMMOG00000005405pabpn110096.127ENSPKIG00000008144-10096.127Paramormyrops_kingsleyae
ENSMMOG00000005405pabpn15876.866ENSPSIG00000011959-9477.444Pelodiscus_sinensis
ENSMMOG00000005405pabpn19598.182ENSPMGG00000022027pabpn110092.606Periophthalmus_magnuspinnatus
ENSMMOG00000005405pabpn19972.961ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSMMOG00000005405pabpn17975.806ENSPMAG00000006212pabpn19965.041Petromyzon_marinus
ENSMMOG00000005405pabpn18680.488ENSPCIG00000027751-8670.833Phascolarctos_cinereus
ENSMMOG00000005405pabpn110097.009ENSPFOG00000010351pabpn19997.009Poecilia_formosa
ENSMMOG00000005405pabpn110098.252ENSPLAG00000022696pabpn110098.252Poecilia_latipinna
ENSMMOG00000005405pabpn110097.009ENSPMEG00000020856pabpn110097.009Poecilia_mexicana
ENSMMOG00000005405pabpn110097.902ENSPREG00000011278pabpn110097.902Poecilia_reticulata
ENSMMOG00000005405pabpn18182.990ENSPPYG00000005663PABPN18970.635Pongo_abelii
ENSMMOG00000005405pabpn17969.792ENSPCAG00000005902PABPN18460.400Procavia_capensis
ENSMMOG00000005405pabpn19976.824ENSPCOG00000028047BCL2L2-PABPN18477.542Propithecus_coquereli
ENSMMOG00000005405pabpn18881.340ENSPVAG00000005270PABPN18669.962Pteropus_vampyrus
ENSMMOG00000005405pabpn110099.569ENSPNYG00000013182pabpn110099.569Pundamilia_nyererei
ENSMMOG00000005405pabpn18862.319ENSPNAG00000021666pabpn1l8469.591Pygocentrus_nattereri
ENSMMOG00000005405pabpn110098.707ENSPNAG00000023526pabpn110098.707Pygocentrus_nattereri
ENSMMOG00000005405pabpn18682.524ENSRNOG00000042195Pabpn18570.992Rattus_norvegicus
ENSMMOG00000005405pabpn18871.770ENSRBIG00000042811-9567.841Rhinopithecus_bieti
ENSMMOG00000005405pabpn19472.398ENSRBIG00000040762BCL2L2-PABPN16872.398Rhinopithecus_bieti
ENSMMOG00000005405pabpn18972.170ENSRBIG00000039547-8266.964Rhinopithecus_bieti
ENSMMOG00000005405pabpn19472.398ENSRROG00000045535BCL2L2-PABPN19482.738Rhinopithecus_roxellana
ENSMMOG00000005405pabpn18868.246ENSRROG00000036409-7065.066Rhinopithecus_roxellana
ENSMMOG00000005405pabpn19467.411ENSRROG00000040409-8267.411Rhinopithecus_roxellana
ENSMMOG00000005405pabpn19969.106ENSSBOG00000026930BCL2L2-PABPN19282.692Saimiri_boliviensis_boliviensis
ENSMMOG00000005405pabpn19962.605ENSSHAG00000007707-9959.244Sarcophilus_harrisii
ENSMMOG00000005405pabpn18182.011ENSSHAG00000014841-8784.211Sarcophilus_harrisii
ENSMMOG00000005405pabpn110096.552ENSSFOG00015014718pabpn110096.552Scleropages_formosus
ENSMMOG00000005405pabpn110090.129ENSSFOG00015012565pabpn110090.129Scleropages_formosus
ENSMMOG00000005405pabpn16173.944ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSMMOG00000005405pabpn110099.296ENSSMAG00000020157pabpn110099.296Scophthalmus_maximus
ENSMMOG00000005405pabpn110098.944ENSSDUG00000020582pabpn110098.944Seriola_dumerili
ENSMMOG00000005405pabpn110099.569ENSSLDG00000007118pabpn110099.569Seriola_lalandi_dorsalis
ENSMMOG00000005405pabpn17184.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSMMOG00000005405pabpn110098.712ENSSPAG00000021658pabpn110098.712Stegastes_partitus
ENSMMOG00000005405pabpn19263.134ENSSSCG00000034805-7959.242Sus_scrofa
ENSMMOG00000005405pabpn19972.961ENSSSCG00000002023PABPN18671.212Sus_scrofa
ENSMMOG00000005405pabpn110097.845ENSTRUG00000023664pabpn110097.845Takifugu_rubripes
ENSMMOG00000005405pabpn19293.023ENSTNIG00000005369pabpn19397.512Tetraodon_nigroviridis
ENSMMOG00000005405pabpn18683.010ENSUAMG00000024460PABPN16882.775Ursus_americanus
ENSMMOG00000005405pabpn19972.961ENSUMAG00000014288BCL2L2-PABPN17072.961Ursus_maritimus
ENSMMOG00000005405pabpn19972.961ENSVVUG00000019912BCL2L2-PABPN17683.505Vulpes_vulpes
ENSMMOG00000005405pabpn18485.714ENSXETG00000014597pabpn17382.407Xenopus_tropicalis
ENSMMOG00000005405pabpn17585.714ENSXCOG00000005158pabpn19885.714Xiphophorus_couchianus
ENSMMOG00000005405pabpn110097.863ENSXMAG00000006196pabpn110097.863Xiphophorus_maculatus

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