EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000005467 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 24011 bases
Position: chrKV751337.1:243398-267408
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000007028	RRM_1	PF00076.22	1.2e-19	1	1
ENSMMOP00000007028	U1snRNP70_N	PF12220.8	3.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000007162	-	1380	-	ENSMMOP00000007028	459 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000005467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000005467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000005467	snrnp70	72	85.204	ENSAPEG00000006219	snrnp70	100	69.038	Amphiprion_percula
ENSMMOG00000005467	snrnp70	50	95.614	ENSGACG00000000448	snrnp70	71	96.035	Gasterosteus_aculeatus
ENSMMOG00000005467	snrnp70	62	95.982	ENSIPUG00000013994	snrnp70	70	77.742	Ictalurus_punctatus
ENSMMOG00000005467	snrnp70	100	62.705	ENSORLG00000017158	snrnp70	100	66.109	Oryzias_latipes
ENSMMOG00000005467	snrnp70	66	67.628	ENSORLG00020018258	snrnp70	70	67.628	Oryzias_latipes_hni
ENSMMOG00000005467	snrnp70	59	86.528	ENSORLG00015010817	snrnp70	100	65.353	Oryzias_latipes_hsok
ENSMMOG00000005467	snrnp70	52	87.395	ENSOARG00000012608	SNRNP70	67	84.000	Ovis_aries
ENSMMOG00000005467	snrnp70	72	96.373	ENSPMEG00000008496	snrnp70	70	96.296	Poecilia_mexicana
ENSMMOG00000005467	snrnp70	78	97.321	ENSSMAG00000013978	snrnp70	100	68.400	Scophthalmus_maximus
ENSMMOG00000005467	snrnp70	78	98.661	ENSSDUG00000017591	snrnp70	100	70.238	Seriola_dumerili
ENSMMOG00000005467	snrnp70	78	98.661	ENSSLDG00000009459	snrnp70	100	73.987	Seriola_lalandi_dorsalis
ENSMMOG00000005467	snrnp70	54	80.800	ENSXETG00000022919	snrnp70	61	83.058	Xenopus_tropicalis
ENSMMOG00000005467	snrnp70	75	84.135	ENSXCOG00000008991	snrnp70	71	89.418	Xiphophorus_couchianus
ENSMMOG00000005467	snrnp70	75	84.135	ENSXMAG00000012789	snrnp70	100	65.417	Xiphophorus_maculatus