EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000005504 (Gene tree)
Gene ID: -
Gene Symbol: smn1
Alias: fa12d01|smn|wu:fa12d01
Full Name: survival of motor neuron 1%2C telomeric
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 2775 bases
Position: chrKV751368.1:1115117-1117891
Accession: ZDB-GENE-990715-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000007078	SMN	PF06003.12	3.5e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000007212	-	807	-	ENSMMOP00000007078	268 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000005504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000005504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000005504	smn1	94	53.612	ENSG00000205571	SMN2	93	51.145	Homo_sapiens
ENSMMOG00000005504	smn1	94	53.612	ENSG00000172062	SMN1	93	51.145	Homo_sapiens
ENSMMOG00000005504	smn1	97	70.290	ENSAPOG00000011324	smn1	96	69.963	Acanthochromis_polyacanthus
ENSMMOG00000005504	smn1	96	50.000	ENSAMEG00000003316	-	89	46.909	Ailuropoda_melanoleuca
ENSMMOG00000005504	smn1	63	78.235	ENSACIG00000007598	smn1	94	78.235	Amphilophus_citrinellus
ENSMMOG00000005504	smn1	94	69.030	ENSACIG00000019772	-	99	70.301	Amphilophus_citrinellus
ENSMMOG00000005504	smn1	97	71.642	ENSAOCG00000024444	smn1	96	73.801	Amphiprion_ocellaris
ENSMMOG00000005504	smn1	98	71.111	ENSAPEG00000016504	smn1	96	73.801	Amphiprion_percula
ENSMMOG00000005504	smn1	99	67.014	ENSATEG00000002182	smn1	84	72.000	Anabas_testudineus
ENSMMOG00000005504	smn1	69	41.627	ENSAPLG00000010912	-	95	41.919	Anas_platyrhynchos
ENSMMOG00000005504	smn1	96	51.894	ENSACAG00000010017	-	93	47.872	Anolis_carolinensis
ENSMMOG00000005504	smn1	96	49.638	ENSANAG00000032133	-	92	51.825	Aotus_nancymaae
ENSMMOG00000005504	smn1	97	71.429	ENSACLG00000007308	smn1	92	71.805	Astatotilapia_calliptera
ENSMMOG00000005504	smn1	99	56.884	ENSAMXG00000013884	smn1	98	58.545	Astyanax_mexicanus
ENSMMOG00000005504	smn1	97	48.029	ENSBTAG00000005743	SMN2	93	45.455	Bos_taurus
ENSMMOG00000005504	smn1	93	52.590	ENSCJAG00000016290	-	92	51.273	Callithrix_jacchus
ENSMMOG00000005504	smn1	93	50.741	ENSCAFG00000007812	SMN	93	45.455	Canis_familiaris
ENSMMOG00000005504	smn1	96	49.640	ENSCAFG00020019229	-	87	45.455	Canis_lupus_dingo
ENSMMOG00000005504	smn1	96	50.903	ENSCHIG00000015559	-	92	45.714	Capra_hircus
ENSMMOG00000005504	smn1	93	52.590	ENSTSYG00000012058	-	89	52.734	Carlito_syrichta
ENSMMOG00000005504	smn1	73	44.240	ENSCAPG00000011021	-	87	42.647	Cavia_aperea
ENSMMOG00000005504	smn1	95	48.571	ENSCPOG00000012328	-	92	46.595	Cavia_porcellus
ENSMMOG00000005504	smn1	96	48.929	ENSCPOG00000036973	-	91	46.209	Cavia_porcellus
ENSMMOG00000005504	smn1	93	52.191	ENSCCAG00000018127	-	92	52.788	Cebus_capucinus
ENSMMOG00000005504	smn1	93	53.817	ENSCATG00000037002	-	93	50.000	Cercocebus_atys
ENSMMOG00000005504	smn1	93	51.301	ENSCLAG00000000284	-	92	47.101	Chinchilla_lanigera
ENSMMOG00000005504	smn1	93	50.000	ENSCSAG00000015688	-	92	49.630	Chlorocebus_sabaeus
ENSMMOG00000005504	smn1	72	80.000	ENSCHOG00000007346	-	78	86.957	Choloepus_hoffmanni
ENSMMOG00000005504	smn1	97	51.661	ENSCPBG00000010968	-	96	48.519	Chrysemys_picta_bellii
ENSMMOG00000005504	smn1	93	49.630	ENSCANG00000033324	-	89	45.583	Colobus_angolensis_palliatus
ENSMMOG00000005504	smn1	93	50.000	ENSCANG00000038242	-	94	50.000	Colobus_angolensis_palliatus
ENSMMOG00000005504	smn1	96	50.183	ENSCGRG00001017959	-	92	47.407	Cricetulus_griseus_chok1gshd
ENSMMOG00000005504	smn1	96	38.550	ENSCGRG00001016998	-	92	36.742	Cricetulus_griseus_chok1gshd
ENSMMOG00000005504	smn1	96	50.183	ENSCGRG00000007698	Smn1	92	47.407	Cricetulus_griseus_crigri
ENSMMOG00000005504	smn1	98	60.417	ENSCSEG00000015227	smn1	99	61.837	Cynoglossus_semilaevis
ENSMMOG00000005504	smn1	98	64.413	ENSCVAG00000007498	smn1	96	68.248	Cyprinodon_variegatus
ENSMMOG00000005504	smn1	99	52.881	ENSDARG00000018494	smn1	98	56.835	Danio_rerio
ENSMMOG00000005504	smn1	83	43.983	ENSDNOG00000007283	-	97	43.333	Dasypus_novemcinctus
ENSMMOG00000005504	smn1	59	51.572	ENSDNOG00000045949	-	68	50.943	Dasypus_novemcinctus
ENSMMOG00000005504	smn1	95	45.660	ENSDORG00000007082	Smn1	92	40.377	Dipodomys_ordii
ENSMMOG00000005504	smn1	68	43.956	ENSETEG00000001406	-	91	44.792	Echinops_telfairi
ENSMMOG00000005504	smn1	97	37.162	ENSEBUG00000011902	smn1	96	38.571	Eptatretus_burgeri
ENSMMOG00000005504	smn1	89	45.349	ENSEASG00005018000	-	89	45.882	Equus_asinus_asinus
ENSMMOG00000005504	smn1	96	48.014	ENSECAG00000015215	-	93	48.905	Equus_caballus
ENSMMOG00000005504	smn1	89	49.027	ENSEEUG00000015777	-	100	47.581	Erinaceus_europaeus
ENSMMOG00000005504	smn1	98	59.420	ENSELUG00000018067	smn1	96	58.394	Esox_lucius
ENSMMOG00000005504	smn1	94	49.810	ENSFCAG00000028292	SMN	93	48.540	Felis_catus
ENSMMOG00000005504	smn1	93	51.562	ENSFALG00000012320	-	91	51.562	Ficedula_albicollis
ENSMMOG00000005504	smn1	93	46.792	ENSFDAG00000017683	-	90	47.601	Fukomys_damarensis
ENSMMOG00000005504	smn1	94	68.561	ENSFHEG00000018508	smn1	96	69.925	Fundulus_heteroclitus
ENSMMOG00000005504	smn1	67	70.950	ENSGMOG00000017279	smn1	93	61.776	Gadus_morhua
ENSMMOG00000005504	smn1	96	51.880	ENSGALG00000002430	SMN	95	51.321	Gallus_gallus
ENSMMOG00000005504	smn1	97	74.713	ENSGAFG00000009501	smn1	96	71.483	Gambusia_affinis
ENSMMOG00000005504	smn1	98	73.962	ENSGACG00000010584	smn1	94	73.004	Gasterosteus_aculeatus
ENSMMOG00000005504	smn1	98	36.082	ENSGAGG00000013639	-	91	36.567	Gopherus_agassizii
ENSMMOG00000005504	smn1	97	51.661	ENSGAGG00000011374	-	95	50.177	Gopherus_agassizii
ENSMMOG00000005504	smn1	94	51.190	ENSGGOG00000003872	-	93	50.000	Gorilla_gorilla
ENSMMOG00000005504	smn1	58	59.375	ENSGGOG00000026704	-	86	55.676	Gorilla_gorilla
ENSMMOG00000005504	smn1	98	70.000	ENSHBUG00000013987	smn1	96	70.370	Haplochromis_burtoni
ENSMMOG00000005504	smn1	96	45.620	ENSHGLG00000001905	-	94	44.000	Heterocephalus_glaber_female
ENSMMOG00000005504	smn1	93	48.315	ENSHGLG00000001018	-	92	46.931	Heterocephalus_glaber_female
ENSMMOG00000005504	smn1	93	46.617	ENSHGLG00100018676	-	95	44.944	Heterocephalus_glaber_male
ENSMMOG00000005504	smn1	93	48.315	ENSHGLG00100011252	-	92	46.931	Heterocephalus_glaber_male
ENSMMOG00000005504	smn1	100	62.021	ENSHCOG00000017136	smn1	89	64.794	Hippocampus_comes
ENSMMOG00000005504	smn1	97	56.643	ENSIPUG00000012580	smn1	87	54.710	Ictalurus_punctatus
ENSMMOG00000005504	smn1	93	49.813	ENSSTOG00000012288	-	94	48.485	Ictidomys_tridecemlineatus
ENSMMOG00000005504	smn1	63	45.833	ENSJJAG00000014853	-	85	47.093	Jaculus_jaculus
ENSMMOG00000005504	smn1	99	62.587	ENSKMAG00000007239	smn1	98	63.986	Kryptolebias_marmoratus
ENSMMOG00000005504	smn1	98	62.676	ENSLBEG00000022550	smn1	96	67.143	Labrus_bergylta
ENSMMOG00000005504	smn1	94	33.803	ENSLACG00000009808	-	88	37.132	Latimeria_chalumnae
ENSMMOG00000005504	smn1	98	32.526	ENSLOCG00000000801	-	56	34.078	Lepisosteus_oculatus
ENSMMOG00000005504	smn1	98	53.731	ENSLOCG00000011339	smn1	96	53.558	Lepisosteus_oculatus
ENSMMOG00000005504	smn1	93	49.462	ENSLAFG00000003425	-	99	41.520	Loxodonta_africana
ENSMMOG00000005504	smn1	93	51.145	ENSMFAG00000008812	-	92	46.667	Macaca_fascicularis
ENSMMOG00000005504	smn1	94	52.045	ENSMFAG00000031523	SMN1	93	50.763	Macaca_fascicularis
ENSMMOG00000005504	smn1	93	50.382	ENSMMUG00000030594	-	92	44.565	Macaca_mulatta
ENSMMOG00000005504	smn1	94	52.045	ENSMMUG00000020214	SMN1	93	50.763	Macaca_mulatta
ENSMMOG00000005504	smn1	74	40.465	ENSMNEG00000036423	-	77	39.899	Macaca_nemestrina
ENSMMOG00000005504	smn1	94	52.045	ENSMNEG00000035094	-	93	50.763	Macaca_nemestrina
ENSMMOG00000005504	smn1	94	52.045	ENSMLEG00000041902	-	93	50.763	Mandrillus_leucophaeus
ENSMMOG00000005504	smn1	98	73.260	ENSMAMG00000011034	smn1	96	71.898	Mastacembelus_armatus
ENSMMOG00000005504	smn1	98	70.370	ENSMZEG00005013634	smn1	96	70.741	Maylandia_zebra
ENSMMOG00000005504	smn1	69	41.294	ENSMGAG00000008889	-	94	39.896	Meleagris_gallopavo
ENSMMOG00000005504	smn1	96	48.000	ENSMAUG00000010262	Smn1	93	45.693	Mesocricetus_auratus
ENSMMOG00000005504	smn1	66	56.250	ENSMICG00000034708	-	83	54.545	Microcebus_murinus
ENSMMOG00000005504	smn1	94	50.000	ENSMOCG00000017833	Smn1	93	49.064	Microtus_ochrogaster
ENSMMOG00000005504	smn1	96	50.545	ENSMODG00000001436	-	92	50.379	Monodelphis_domestica
ENSMMOG00000005504	smn1	98	68.231	ENSMALG00000008025	smn1	96	70.803	Monopterus_albus
ENSMMOG00000005504	smn1	96	51.880	MGP_CAROLIEiJ_G0018836	Smn1	92	48.120	Mus_caroli
ENSMMOG00000005504	smn1	93	52.308	ENSMUSG00000021645	Smn1	92	47.744	Mus_musculus
ENSMMOG00000005504	smn1	96	51.136	MGP_PahariEiJ_G0015911	Smn1	92	44.643	Mus_pahari
ENSMMOG00000005504	smn1	96	49.438	MGP_SPRETEiJ_G0019718	Smn1	92	47.744	Mus_spretus
ENSMMOG00000005504	smn1	94	51.661	ENSMPUG00000014470	-	93	48.507	Mustela_putorius_furo
ENSMMOG00000005504	smn1	96	47.143	ENSMLUG00000010603	-	89	45.890	Myotis_lucifugus
ENSMMOG00000005504	smn1	96	50.370	ENSNGAG00000019833	Smn1	93	48.699	Nannospalax_galili
ENSMMOG00000005504	smn1	98	69.963	ENSNBRG00000023000	smn1	96	69.597	Neolamprologus_brichardi
ENSMMOG00000005504	smn1	94	53.992	ENSNLEG00000004454	-	93	51.527	Nomascus_leucogenys
ENSMMOG00000005504	smn1	80	43.966	ENSMEUG00000011393	-	99	42.273	Notamacropus_eugenii
ENSMMOG00000005504	smn1	89	49.618	ENSOPRG00000002015	-	100	50.193	Ochotona_princeps
ENSMMOG00000005504	smn1	93	51.866	ENSODEG00000015976	-	92	48.519	Octodon_degus
ENSMMOG00000005504	smn1	98	70.696	ENSONIG00000011799	smn1	96	73.913	Oreochromis_niloticus
ENSMMOG00000005504	smn1	96	46.127	ENSOANG00000001626	-	95	48.699	Ornithorhynchus_anatinus
ENSMMOG00000005504	smn1	93	40.959	ENSOCUG00000025183	-	89	40.809	Oryctolagus_cuniculus
ENSMMOG00000005504	smn1	93	52.809	ENSOCUG00000026649	-	90	48.364	Oryctolagus_cuniculus
ENSMMOG00000005504	smn1	93	53.053	ENSOCUG00000017097	-	89	50.000	Oryctolagus_cuniculus
ENSMMOG00000005504	smn1	98	69.565	ENSORLG00000010552	smn1	96	67.391	Oryzias_latipes
ENSMMOG00000005504	smn1	98	71.970	ENSORLG00020007936	smn1	96	69.318	Oryzias_latipes_hni
ENSMMOG00000005504	smn1	98	69.565	ENSORLG00015022425	smn1	96	66.667	Oryzias_latipes_hsok
ENSMMOG00000005504	smn1	97	67.897	ENSOMEG00000007824	smn1	96	61.538	Oryzias_melastigma
ENSMMOG00000005504	smn1	93	48.913	ENSOGAG00000031414	-	92	45.018	Otolemur_garnettii
ENSMMOG00000005504	smn1	96	48.551	ENSOARG00000005425	-	97	44.565	Ovis_aries
ENSMMOG00000005504	smn1	94	53.612	ENSPPAG00000036640	-	93	51.145	Pan_paniscus
ENSMMOG00000005504	smn1	93	50.588	ENSPPRG00000005575	-	93	48.540	Panthera_pardus
ENSMMOG00000005504	smn1	93	50.588	ENSPTIG00000007745	-	93	50.182	Panthera_tigris_altaica
ENSMMOG00000005504	smn1	94	53.008	ENSPTRG00000016955	-	93	50.566	Pan_troglodytes
ENSMMOG00000005504	smn1	96	50.370	ENSPANG00000000253	-	91	48.669	Papio_anubis
ENSMMOG00000005504	smn1	94	52.045	ENSPANG00000013601	-	92	49.630	Papio_anubis
ENSMMOG00000005504	smn1	99	57.143	ENSPKIG00000011096	smn1	96	56.716	Paramormyrops_kingsleyae
ENSMMOG00000005504	smn1	93	48.289	ENSPSIG00000014787	-	83	47.638	Pelodiscus_sinensis
ENSMMOG00000005504	smn1	97	67.537	ENSPMGG00000012285	smn1	99	66.426	Periophthalmus_magnuspinnatus
ENSMMOG00000005504	smn1	94	40.364	ENSPMAG00000005004	smn1	92	38.406	Petromyzon_marinus
ENSMMOG00000005504	smn1	96	50.182	ENSPCIG00000025764	-	93	50.000	Phascolarctos_cinereus
ENSMMOG00000005504	smn1	98	69.065	ENSPFOG00000007786	smn1	96	67.766	Poecilia_formosa
ENSMMOG00000005504	smn1	97	74.330	ENSPLAG00000012071	smn1	96	71.103	Poecilia_latipinna
ENSMMOG00000005504	smn1	97	73.946	ENSPMEG00000017085	smn1	96	70.722	Poecilia_mexicana
ENSMMOG00000005504	smn1	97	73.946	ENSPREG00000005824	smn1	96	70.722	Poecilia_reticulata
ENSMMOG00000005504	smn1	89	37.238	ENSPPYG00000019189	-	99	37.449	Pongo_abelii
ENSMMOG00000005504	smn1	90	52.569	ENSPPYG00000015533	-	92	49.802	Pongo_abelii
ENSMMOG00000005504	smn1	91	45.385	ENSPCAG00000004187	-	97	44.569	Procavia_capensis
ENSMMOG00000005504	smn1	63	51.705	ENSPCOG00000022307	-	65	56.944	Propithecus_coquereli
ENSMMOG00000005504	smn1	93	51.481	ENSPVAG00000005977	-	92	47.273	Pteropus_vampyrus
ENSMMOG00000005504	smn1	98	69.963	ENSPNYG00000014148	smn1	96	69.597	Pundamilia_nyererei
ENSMMOG00000005504	smn1	97	62.731	ENSPNAG00000014007	smn1	85	58.909	Pygocentrus_nattereri
ENSMMOG00000005504	smn1	93	45.693	ENSRNOG00000018067	Smn1	92	46.415	Rattus_norvegicus
ENSMMOG00000005504	smn1	93	48.828	ENSRBIG00000036775	-	88	47.674	Rhinopithecus_bieti
ENSMMOG00000005504	smn1	94	49.814	ENSRBIG00000037052	-	92	49.630	Rhinopithecus_bieti
ENSMMOG00000005504	smn1	94	49.814	ENSRROG00000039399	-	93	50.763	Rhinopithecus_roxellana
ENSMMOG00000005504	smn1	96	47.308	ENSRROG00000031088	-	94	43.369	Rhinopithecus_roxellana
ENSMMOG00000005504	smn1	93	52.590	ENSSBOG00000011665	-	91	50.758	Saimiri_boliviensis_boliviensis
ENSMMOG00000005504	smn1	54	56.667	ENSSBOG00000020112	-	52	56.667	Saimiri_boliviensis_boliviensis
ENSMMOG00000005504	smn1	96	50.545	ENSSHAG00000001499	-	97	47.710	Sarcophilus_harrisii
ENSMMOG00000005504	smn1	97	58.301	ENSSFOG00015015507	smn1	95	57.915	Scleropages_formosus
ENSMMOG00000005504	smn1	98	67.626	ENSSMAG00000007922	smn1	96	68.864	Scophthalmus_maximus
ENSMMOG00000005504	smn1	99	73.929	ENSSDUG00000018533	smn1	96	74.453	Seriola_dumerili
ENSMMOG00000005504	smn1	97	70.144	ENSSLDG00000021135	smn1	96	74.818	Seriola_lalandi_dorsalis
ENSMMOG00000005504	smn1	97	50.000	ENSSPUG00000000373	-	95	49.291	Sphenodon_punctatus
ENSMMOG00000005504	smn1	97	72.519	ENSSPAG00000004345	smn1	96	72.624	Stegastes_partitus
ENSMMOG00000005504	smn1	96	38.462	ENSSSCG00000029127	-	91	38.077	Sus_scrofa
ENSMMOG00000005504	smn1	93	49.446	ENSSSCG00000016970	-	92	47.101	Sus_scrofa
ENSMMOG00000005504	smn1	93	46.454	ENSTGUG00000001548	-	96	47.810	Taeniopygia_guttata
ENSMMOG00000005504	smn1	97	67.658	ENSTRUG00000000736	smn	96	67.658	Takifugu_rubripes
ENSMMOG00000005504	smn1	97	62.455	ENSTNIG00000009892	smn1	96	63.406	Tetraodon_nigroviridis
ENSMMOG00000005504	smn1	66	56.111	ENSTBEG00000002399	-	89	54.450	Tupaia_belangeri
ENSMMOG00000005504	smn1	93	49.811	ENSTTRG00000005080	-	90	47.601	Tursiops_truncatus
ENSMMOG00000005504	smn1	66	54.444	ENSUAMG00000024947	-	68	52.880	Ursus_americanus
ENSMMOG00000005504	smn1	96	50.000	ENSUMAG00000007842	-	69	46.909	Ursus_maritimus
ENSMMOG00000005504	smn1	66	77.778	ENSVPAG00000009887	-	62	82.609	Vicugna_pacos
ENSMMOG00000005504	smn1	95	50.365	ENSVVUG00000006934	-	93	45.455	Vulpes_vulpes
ENSMMOG00000005504	smn1	88	35.985	ENSXETG00000004912	-	80	62.069	Xenopus_tropicalis
ENSMMOG00000005504	smn1	96	50.752	ENSXETG00000018189	smn2	91	50.943	Xenopus_tropicalis
ENSMMOG00000005504	smn1	97	74.330	ENSXMAG00000001521	smn1	96	71.103	Xiphophorus_maculatus