EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000005547 (Gene tree)
Gene ID: -
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 7870 bases
Position: chrKV751317.1:16038700-16046569
Accession: ZDB-GENE-021125-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000007153	ResIII	PF04851.15	7.3e-11	1	1
ENSMMOP00000007153	DEAD	PF00270.29	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000007288	-	2934	-	ENSMMOP00000007153	977 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000005547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000005547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000005547	smarca5	53	39.341	ENSMMOG00000007950	hells	72	39.341
ENSMMOG00000005547	smarca5	55	40.182	ENSMMOG00000005964	chd1l	57	40.182
ENSMMOG00000005547	smarca5	55	31.864	ENSMMOG00000003394	rad54b	67	31.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000005547	smarca5	99	81.231	ENSG00000102038	SMARCA1	93	81.231	Homo_sapiens
ENSMMOG00000005547	smarca5	100	97.384	ENSAPOG00000016035	smarca5	99	97.059	Acanthochromis_polyacanthus
ENSMMOG00000005547	smarca5	99	80.140	ENSAMEG00000015218	SMARCA1	94	80.140	Ailuropoda_melanoleuca
ENSMMOG00000005547	smarca5	91	96.337	ENSACIG00000016982	smarca5	100	96.337	Amphilophus_citrinellus
ENSMMOG00000005547	smarca5	100	97.384	ENSAOCG00000015578	smarca5	96	97.384	Amphiprion_ocellaris
ENSMMOG00000005547	smarca5	100	97.384	ENSAPEG00000011117	smarca5	99	97.400	Amphiprion_percula
ENSMMOG00000005547	smarca5	100	96.576	ENSATEG00000012894	smarca5	96	96.576	Anabas_testudineus
ENSMMOG00000005547	smarca5	99	82.587	ENSAPLG00000013149	SMARCA1	99	82.587	Anas_platyrhynchos
ENSMMOG00000005547	smarca5	99	82.710	ENSACAG00000011376	SMARCA1	94	82.710	Anolis_carolinensis
ENSMMOG00000005547	smarca5	99	76.488	ENSANAG00000023098	SMARCA1	93	76.488	Aotus_nancymaae
ENSMMOG00000005547	smarca5	100	96.378	ENSACLG00000025356	smarca5	96	96.378	Astatotilapia_calliptera
ENSMMOG00000005547	smarca5	93	82.492	ENSAMXG00000011227	smarca1	99	83.595	Astyanax_mexicanus
ENSMMOG00000005547	smarca5	99	92.951	ENSAMXG00000005709	smarca5	96	92.951	Astyanax_mexicanus
ENSMMOG00000005547	smarca5	99	81.346	ENSBTAG00000002292	SMARCA1	91	81.250	Bos_taurus
ENSMMOG00000005547	smarca5	99	62.462	WBGene00002169	isw-1	98	61.771	Caenorhabditis_elegans
ENSMMOG00000005547	smarca5	99	81.231	ENSCJAG00000002868	SMARCA1	93	81.231	Callithrix_jacchus
ENSMMOG00000005547	smarca5	99	71.897	ENSCAFG00000018673	SMARCA1	99	73.536	Canis_familiaris
ENSMMOG00000005547	smarca5	99	81.212	ENSCAFG00020001751	SMARCA1	93	81.212	Canis_lupus_dingo
ENSMMOG00000005547	smarca5	99	81.054	ENSCHIG00000009837	SMARCA1	93	81.054	Capra_hircus
ENSMMOG00000005547	smarca5	99	81.212	ENSTSYG00000004240	SMARCA1	95	81.990	Carlito_syrichta
ENSMMOG00000005547	smarca5	99	79.719	ENSCPOG00000013601	SMARCA1	94	79.719	Cavia_porcellus
ENSMMOG00000005547	smarca5	99	78.607	ENSCCAG00000030817	SMARCA1	93	78.607	Cebus_capucinus
ENSMMOG00000005547	smarca5	97	82.316	ENSCATG00000015921	SMARCA1	91	82.353	Cercocebus_atys
ENSMMOG00000005547	smarca5	99	80.404	ENSCLAG00000002171	SMARCA1	93	80.404	Chinchilla_lanigera
ENSMMOG00000005547	smarca5	99	81.231	ENSCSAG00000008460	SMARCA1	93	81.231	Chlorocebus_sabaeus
ENSMMOG00000005547	smarca5	99	82.472	ENSCPBG00000001146	SMARCA1	93	82.472	Chrysemys_picta_bellii
ENSMMOG00000005547	smarca5	99	73.293	ENSCING00000004110	swi/snf	99	73.293	Ciona_intestinalis
ENSMMOG00000005547	smarca5	99	72.244	ENSCSAVG00000004620	-	99	74.468	Ciona_savignyi
ENSMMOG00000005547	smarca5	99	81.332	ENSCANG00000007183	SMARCA1	93	81.332	Colobus_angolensis_palliatus
ENSMMOG00000005547	smarca5	99	80.222	ENSCGRG00001010776	Smarca1	93	80.222	Cricetulus_griseus_chok1gshd
ENSMMOG00000005547	smarca5	97	80.658	ENSCGRG00000015301	Smarca1	95	80.669	Cricetulus_griseus_crigri
ENSMMOG00000005547	smarca5	100	96.173	ENSCSEG00000000328	smarca5	96	96.173	Cynoglossus_semilaevis
ENSMMOG00000005547	smarca5	100	95.770	ENSCVAG00000008668	smarca5	99	95.514	Cyprinodon_variegatus
ENSMMOG00000005547	smarca5	99	80.178	ENSDARG00000012776	smarca1	97	80.178	Danio_rerio
ENSMMOG00000005547	smarca5	99	92.619	ENSDARG00000052348	smarca5	95	92.619	Danio_rerio
ENSMMOG00000005547	smarca5	97	81.988	ENSDNOG00000004315	SMARCA1	92	82.019	Dasypus_novemcinctus
ENSMMOG00000005547	smarca5	97	81.884	ENSDORG00000009270	Smarca1	91	81.914	Dipodomys_ordii
ENSMMOG00000005547	smarca5	97	74.356	FBgn0011604	Iswi	98	72.387	Drosophila_melanogaster
ENSMMOG00000005547	smarca5	81	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSMMOG00000005547	smarca5	99	80.163	ENSEBUG00000001239	smarca5	97	80.163	Eptatretus_burgeri
ENSMMOG00000005547	smarca5	99	77.328	ENSEASG00005008218	SMARCA1	99	77.733	Equus_asinus_asinus
ENSMMOG00000005547	smarca5	99	81.111	ENSECAG00000012106	SMARCA1	93	81.111	Equus_caballus
ENSMMOG00000005547	smarca5	79	83.775	ENSEEUG00000014927	SMARCA1	80	83.775	Erinaceus_europaeus
ENSMMOG00000005547	smarca5	98	82.377	ENSELUG00000010515	smarca1	94	84.772	Esox_lucius
ENSMMOG00000005547	smarca5	99	81.111	ENSFCAG00000018496	SMARCA1	94	81.111	Felis_catus
ENSMMOG00000005547	smarca5	92	83.698	ENSFALG00000000209	SMARCA1	98	83.698	Ficedula_albicollis
ENSMMOG00000005547	smarca5	97	80.573	ENSFDAG00000009818	SMARCA1	94	80.582	Fukomys_damarensis
ENSMMOG00000005547	smarca5	100	95.368	ENSFHEG00000007687	smarca5	95	95.368	Fundulus_heteroclitus
ENSMMOG00000005547	smarca5	97	83.455	ENSGALG00000008431	SMARCA1	95	83.455	Gallus_gallus
ENSMMOG00000005547	smarca5	100	96.073	ENSGAFG00000017731	smarca5	96	96.073	Gambusia_affinis
ENSMMOG00000005547	smarca5	98	83.025	ENSGAGG00000023575	SMARCA1	99	83.025	Gopherus_agassizii
ENSMMOG00000005547	smarca5	74	92.308	ENSGGOG00000012841	-	93	92.308	Gorilla_gorilla
ENSMMOG00000005547	smarca5	99	80.202	ENSHGLG00000003080	SMARCA1	93	80.202	Heterocephalus_glaber_female
ENSMMOG00000005547	smarca5	99	79.719	ENSHGLG00100001102	SMARCA1	99	79.719	Heterocephalus_glaber_male
ENSMMOG00000005547	smarca5	100	96.274	ENSHCOG00000005458	smarca5	96	96.274	Hippocampus_comes
ENSMMOG00000005547	smarca5	99	92.377	ENSIPUG00000005229	SMARCA5	99	92.377	Ictalurus_punctatus
ENSMMOG00000005547	smarca5	99	81.332	ENSIPUG00000016905	Smarca1	99	81.976	Ictalurus_punctatus
ENSMMOG00000005547	smarca5	99	81.010	ENSSTOG00000014524	SMARCA1	96	80.262	Ictidomys_tridecemlineatus
ENSMMOG00000005547	smarca5	99	79.698	ENSJJAG00000002593	Smarca1	94	79.698	Jaculus_jaculus
ENSMMOG00000005547	smarca5	100	95.569	ENSKMAG00000003777	smarca5	96	95.569	Kryptolebias_marmoratus
ENSMMOG00000005547	smarca5	100	95.368	ENSLBEG00000018112	smarca5	96	95.368	Labrus_bergylta
ENSMMOG00000005547	smarca5	94	95.187	ENSLBEG00000013295	SMARCA1	100	96.076	Labrus_bergylta
ENSMMOG00000005547	smarca5	98	83.711	ENSLACG00000016697	SMARCA1	95	83.711	Latimeria_chalumnae
ENSMMOG00000005547	smarca5	98	83.980	ENSLOCG00000014591	smarca1	95	83.980	Lepisosteus_oculatus
ENSMMOG00000005547	smarca5	99	80.020	ENSLAFG00000000896	SMARCA1	99	80.020	Loxodonta_africana
ENSMMOG00000005547	smarca5	99	81.231	ENSMFAG00000002117	SMARCA1	94	82.180	Macaca_fascicularis
ENSMMOG00000005547	smarca5	97	82.316	ENSMMUG00000008818	SMARCA1	97	82.854	Macaca_mulatta
ENSMMOG00000005547	smarca5	97	82.316	ENSMNEG00000041768	SMARCA1	94	82.180	Macaca_nemestrina
ENSMMOG00000005547	smarca5	99	81.231	ENSMLEG00000043198	SMARCA1	93	81.231	Mandrillus_leucophaeus
ENSMMOG00000005547	smarca5	100	96.389	ENSMAMG00000014294	smarca5	96	96.389	Mastacembelus_armatus
ENSMMOG00000005547	smarca5	100	96.378	ENSMZEG00005009369	smarca5	96	96.378	Maylandia_zebra
ENSMMOG00000005547	smarca5	99	81.489	ENSMGAG00000007042	SMARCA1	98	81.489	Meleagris_gallopavo
ENSMMOG00000005547	smarca5	97	80.433	ENSMAUG00000008133	Smarca1	91	80.439	Mesocricetus_auratus
ENSMMOG00000005547	smarca5	99	81.414	ENSMICG00000015768	SMARCA1	94	81.414	Microcebus_murinus
ENSMMOG00000005547	smarca5	99	79.397	ENSMOCG00000009464	Smarca1	94	79.397	Microtus_ochrogaster
ENSMMOG00000005547	smarca5	98	82.564	ENSMODG00000013187	-	94	82.564	Monodelphis_domestica
ENSMMOG00000005547	smarca5	100	96.784	ENSMALG00000002081	smarca5	98	95.617	Monopterus_albus
ENSMMOG00000005547	smarca5	99	79.598	MGP_CAROLIEiJ_G0033034	Smarca1	94	79.598	Mus_caroli
ENSMMOG00000005547	smarca5	99	79.698	ENSMUSG00000031099	Smarca1	94	79.698	Mus_musculus
ENSMMOG00000005547	smarca5	99	79.858	MGP_PahariEiJ_G0031579	Smarca1	93	79.858	Mus_pahari
ENSMMOG00000005547	smarca5	99	79.698	MGP_SPRETEiJ_G0034192	Smarca1	94	79.698	Mus_spretus
ENSMMOG00000005547	smarca5	99	80.240	ENSMPUG00000017423	SMARCA1	88	80.240	Mustela_putorius_furo
ENSMMOG00000005547	smarca5	99	78.984	ENSMLUG00000029614	SMARCA1	94	78.685	Myotis_lucifugus
ENSMMOG00000005547	smarca5	97	80.947	ENSNGAG00000006492	Smarca1	91	80.962	Nannospalax_galili
ENSMMOG00000005547	smarca5	100	96.479	ENSNBRG00000004463	smarca5	99	96.479	Neolamprologus_brichardi
ENSMMOG00000005547	smarca5	99	79.561	ENSNLEG00000015179	SMARCA1	95	81.466	Nomascus_leucogenys
ENSMMOG00000005547	smarca5	92	74.596	ENSMEUG00000008819	SMARCA1	97	74.596	Notamacropus_eugenii
ENSMMOG00000005547	smarca5	97	80.470	ENSODEG00000012163	SMARCA1	91	80.729	Octodon_degus
ENSMMOG00000005547	smarca5	100	96.479	ENSONIG00000009993	smarca5	96	96.479	Oreochromis_niloticus
ENSMMOG00000005547	smarca5	98	83.333	ENSOANG00000002862	SMARCA1	99	83.333	Ornithorhynchus_anatinus
ENSMMOG00000005547	smarca5	99	81.459	ENSOCUG00000001047	SMARCA1	93	81.459	Oryctolagus_cuniculus
ENSMMOG00000005547	smarca5	100	95.670	ENSORLG00000021998	smarca5	96	95.670	Oryzias_latipes
ENSMMOG00000005547	smarca5	100	95.770	ENSORLG00020017679	smarca5	96	95.770	Oryzias_latipes_hni
ENSMMOG00000005547	smarca5	100	95.871	ENSORLG00015017210	smarca5	96	95.871	Oryzias_latipes_hsok
ENSMMOG00000005547	smarca5	100	95.871	ENSOMEG00000000086	smarca5	96	95.871	Oryzias_melastigma
ENSMMOG00000005547	smarca5	97	81.622	ENSOGAG00000004399	SMARCA1	91	81.667	Otolemur_garnettii
ENSMMOG00000005547	smarca5	98	81.595	ENSOARG00000014638	SMARCA1	99	81.595	Ovis_aries
ENSMMOG00000005547	smarca5	99	81.231	ENSPPAG00000034647	SMARCA1	93	81.231	Pan_paniscus
ENSMMOG00000005547	smarca5	99	81.212	ENSPPRG00000008929	SMARCA1	94	81.212	Panthera_pardus
ENSMMOG00000005547	smarca5	99	79.444	ENSPTIG00000000915	SMARCA1	97	79.444	Panthera_tigris_altaica
ENSMMOG00000005547	smarca5	99	81.231	ENSPTRG00000049876	SMARCA1	91	82.353	Pan_troglodytes
ENSMMOG00000005547	smarca5	99	81.231	ENSPANG00000003871	SMARCA1	93	81.231	Papio_anubis
ENSMMOG00000005547	smarca5	98	80.368	ENSPKIG00000013411	smarca1	99	80.368	Paramormyrops_kingsleyae
ENSMMOG00000005547	smarca5	98	83.025	ENSPSIG00000010101	SMARCA1	99	83.025	Pelodiscus_sinensis
ENSMMOG00000005547	smarca5	97	80.742	ENSPEMG00000017503	Smarca1	91	80.753	Peromyscus_maniculatus_bairdii
ENSMMOG00000005547	smarca5	98	82.992	ENSPCIG00000015460	SMARCA1	96	82.992	Phascolarctos_cinereus
ENSMMOG00000005547	smarca5	100	96.073	ENSPFOG00000007649	smarca5	96	96.073	Poecilia_formosa
ENSMMOG00000005547	smarca5	100	96.073	ENSPLAG00000003363	smarca5	96	96.073	Poecilia_latipinna
ENSMMOG00000005547	smarca5	100	96.173	ENSPMEG00000019849	smarca5	96	96.173	Poecilia_mexicana
ENSMMOG00000005547	smarca5	100	96.173	ENSPREG00000023250	smarca5	96	96.173	Poecilia_reticulata
ENSMMOG00000005547	smarca5	99	78.406	ENSPPYG00000020703	SMARCA1	93	78.406	Pongo_abelii
ENSMMOG00000005547	smarca5	79	78.125	ENSPCOG00000020722	SMARCA1	97	78.192	Propithecus_coquereli
ENSMMOG00000005547	smarca5	91	81.290	ENSPVAG00000003805	SMARCA1	86	81.340	Pteropus_vampyrus
ENSMMOG00000005547	smarca5	62	98.153	ENSPNYG00000012299	smarca5	92	98.153	Pundamilia_nyererei
ENSMMOG00000005547	smarca5	99	80.000	ENSRNOG00000003762	Smarca1	94	80.000	Rattus_norvegicus
ENSMMOG00000005547	smarca5	99	81.332	ENSRROG00000034167	SMARCA1	93	81.332	Rhinopithecus_roxellana
ENSMMOG00000005547	smarca5	98	81.800	ENSSBOG00000020641	SMARCA1	99	81.800	Saimiri_boliviensis_boliviensis
ENSMMOG00000005547	smarca5	98	78.292	ENSSHAG00000013518	SMARCA1	99	78.417	Sarcophilus_harrisii
ENSMMOG00000005547	smarca5	99	82.622	ENSSFOG00015009043	smarca1	96	82.622	Scleropages_formosus
ENSMMOG00000005547	smarca5	99	91.194	ENSSFOG00015016794	smarca5	100	92.062	Scleropages_formosus
ENSMMOG00000005547	smarca5	99	95.464	ENSSMAG00000004801	smarca5	96	95.464	Scophthalmus_maximus
ENSMMOG00000005547	smarca5	99	96.673	ENSSDUG00000020690	smarca5	96	96.673	Seriola_dumerili
ENSMMOG00000005547	smarca5	99	96.673	ENSSLDG00000025190	smarca5	96	96.673	Seriola_lalandi_dorsalis
ENSMMOG00000005547	smarca5	81	83.630	ENSSARG00000000842	SMARCA1	81	83.630	Sorex_araneus
ENSMMOG00000005547	smarca5	97	83.058	ENSSPUG00000000590	SMARCA1	94	83.058	Sphenodon_punctatus
ENSMMOG00000005547	smarca5	100	96.881	ENSSPAG00000002894	smarca5	97	96.841	Stegastes_partitus
ENSMMOG00000005547	smarca5	97	81.988	ENSSSCG00000012649	SMARCA1	97	80.040	Sus_scrofa
ENSMMOG00000005547	smarca5	99	82.281	ENSTGUG00000003899	-	99	82.281	Taeniopygia_guttata
ENSMMOG00000005547	smarca5	100	95.267	ENSTRUG00000014094	smarca5	96	95.267	Takifugu_rubripes
ENSMMOG00000005547	smarca5	100	94.361	ENSTNIG00000017717	smarca5	95	94.361	Tetraodon_nigroviridis
ENSMMOG00000005547	smarca5	89	80.710	ENSTBEG00000014973	SMARCA1	89	80.722	Tupaia_belangeri
ENSMMOG00000005547	smarca5	97	77.835	ENSTTRG00000006168	SMARCA1	97	77.075	Tursiops_truncatus
ENSMMOG00000005547	smarca5	99	81.029	ENSUAMG00000020201	SMARCA1	93	81.029	Ursus_americanus
ENSMMOG00000005547	smarca5	99	78.883	ENSUMAG00000004073	SMARCA1	98	83.213	Ursus_maritimus
ENSMMOG00000005547	smarca5	76	84.783	ENSVPAG00000010492	-	77	84.783	Vicugna_pacos
ENSMMOG00000005547	smarca5	99	81.212	ENSVVUG00000008878	SMARCA1	98	83.174	Vulpes_vulpes
ENSMMOG00000005547	smarca5	99	82.299	ENSXETG00000001526	smarca1	98	82.299	Xenopus_tropicalis
ENSMMOG00000005547	smarca5	100	95.871	ENSXCOG00000011170	smarca5	99	95.871	Xiphophorus_couchianus
ENSMMOG00000005547	smarca5	100	95.871	ENSXMAG00000009678	smarca5	98	95.742	Xiphophorus_maculatus